FFCP PHASE1:Hg19::chr12:66218413..66218418,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002321!1.19e-12!248;CL:0000055!1.44e-12!180;CL:0000066!4.05e-12!254;CL:0000220!8.96e-12!246;CL:0000548!1.21e-11!679;CL:0000004!1.21e-11!679;CL:0000255!1.21e-11!679;CL:0000012!2.68e-11!682;CL:0002371!1.91e-07!591;CL:0000003!4.53e-07!722;CL:0000183!6.01e-07!59 | |ontology_enrichment_celltype=CL:0002321!1.19e-12!248;CL:0000055!1.44e-12!180;CL:0000066!4.05e-12!254;CL:0000220!8.96e-12!246;CL:0000548!1.21e-11!679;CL:0000004!1.21e-11!679;CL:0000255!1.21e-11!679;CL:0000012!2.68e-11!682;CL:0002371!1.91e-07!591;CL:0000003!4.53e-07!722;CL:0000183!6.01e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.02e-08;15!CL:0002322;7.22e-08;5!CL:1000497;1.28e-07;17!CL:0002518;1.28e-07;17!CL:0002188;2.12e-07;5 | |ontology_enrichment_celltype_v019=CL:1000449;1.02e-08;15!CL:0002322;7.22e-08;5!CL:1000497;1.28e-07;17!CL:0002518;1.28e-07;17!CL:0002188;2.12e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:1000449,1.24e-08,15;CL:0002322,6.62e-08,5;CL:1000497,1.53e-07,17;CL:0002518,1.53e-07,17;CL:0002188,2.09e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!6.77e-13!143;UBERON:0002100!7.40e-09!216;UBERON:0003104!1.01e-08!238;UBERON:0009142!1.01e-08!238;UBERON:0000119!8.18e-08!312;UBERON:0000914!1.06e-07!83;UBERON:0002329!1.06e-07!83;UBERON:0003077!1.06e-07!83;UBERON:0003059!1.06e-07!83;UBERON:0007282!1.06e-07!83;UBERON:0009618!1.06e-07!83;UBERON:0007285!1.06e-07!83;UBERON:0000475!1.83e-07!365;UBERON:0000483!1.94e-07!309;UBERON:0003914!2.04e-07!118;UBERON:0000481!2.55e-07!347;UBERON:0000486!2.91e-07!82;UBERON:0000922!5.79e-07!612 | |ontology_enrichment_uberon=UBERON:0005256!6.77e-13!143;UBERON:0002100!7.40e-09!216;UBERON:0003104!1.01e-08!238;UBERON:0009142!1.01e-08!238;UBERON:0000119!8.18e-08!312;UBERON:0000914!1.06e-07!83;UBERON:0002329!1.06e-07!83;UBERON:0003077!1.06e-07!83;UBERON:0003059!1.06e-07!83;UBERON:0007282!1.06e-07!83;UBERON:0009618!1.06e-07!83;UBERON:0007285!1.06e-07!83;UBERON:0000475!1.83e-07!365;UBERON:0000483!1.94e-07!309;UBERON:0003914!2.04e-07!118;UBERON:0000481!2.55e-07!347;UBERON:0000486!2.91e-07!82;UBERON:0000922!5.79e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.02e-08;15!UBERON:0004819;1.02e-08;15!UBERON:0001285;1.02e-08;15!UBERON:0007684;1.02e-08;15!UBERON:0002113;4.37e-07;24!UBERON:0011143;4.37e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0006555;1.02e-08;15!UBERON:0004819;1.02e-08;15!UBERON:0001285;1.02e-08;15!UBERON:0007684;1.02e-08;15!UBERON:0002113;4.37e-07;24!UBERON:0011143;4.37e-07;24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.24e-08,15;UBERON:0009773,1.24e-08,15;UBERON:0001231,1.24e-08,15;UBERON:0001285,1.24e-08,15;UBERON:0007684,1.24e-08,15;UBERON:0004208,1.24e-08,15;UBERON:0006555,4.71e-08,16;UBERON:0004819,4.71e-08,16;UBERON:0005172,9.90e-08,54;UBERON:0005173,9.90e-08,54 | |||
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| ||
|short_description=p17@HMGA2 | |short_description=p17@HMGA2 | ||
}} | }} |
Revision as of 05:42, 21 November 2012
Short description: | p17@HMGA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_HMGA2_5end |
Coexpression cluster: | C749_Wilms_rhabdomyosarcoma_medulloblastoma_fibrous_retinoblastoma_endometrial_schwannoma |
Association with transcript: | -172bp_to_ENST00000545998_5end |
EntrezGene: | HMGA2 |
HGNC: | 5009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 1.24e-08 | 15 |
embryonic stem cell | 6.62e-08 | 5 |
kidney cell | 1.53e-07 | 17 |
kidney epithelial cell | 1.53e-07 | 17 |
glomerular endothelial cell | 2.09e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.24e-08 | 15 |
renal tubule | 1.24e-08 | 15 |
nephron tubule | 1.24e-08 | 15 |
nephron | 1.24e-08 | 15 |
uriniferous tubule | 1.24e-08 | 15 |
nephrogenic mesenchyme | 1.24e-08 | 15 |
excretory tube | 4.71e-08 | 16 |
kidney epithelium | 4.71e-08 | 16 |
abdomen element | 9.90e-08 | 54 |
abdominal segment element | 9.90e-08 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.