FFCP PHASE1:Hg19::chr6:7541845..7541878,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.13e-34!254;CL:0000223!4.62e-19!59;CL:0002076!8.75e-17!43;CL:0002251!4.74e-09!21;CL:0002368!5.67e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.13e-34!254;CL:0000223!4.62e-19!59;CL:0002076!8.75e-17!43;CL:0002251!4.74e-09!21;CL:0002368!5.67e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.06e-13;42!CL:0002251;6.74e-10;20!CL:0002368;2.36e-07;13 | |ontology_enrichment_celltype_v019=CL:0002076;1.06e-13;42!CL:0002251;6.74e-10;20!CL:0002368;2.36e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.94e-36,253;CL:0000223,6.06e-21,58;CL:0002076,2.58e-18,42;CL:0002251,6.59e-10,20;CL:0002368,2.32e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;3.10e-11;58!UBERON:0006595;1.64e-08;86 | |ontology_enrichment_development_v019=CL:0000223;3.10e-11;58!UBERON:0006595;1.64e-08;86 | ||
|ontology_enrichment_disease=DOID:305!1.11e-21!106;DOID:0050687!3.73e-14!143;DOID:299!1.90e-07!25 | |ontology_enrichment_disease=DOID:305!1.11e-21!106;DOID:0050687!3.73e-14!143;DOID:299!1.90e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:305;9.31e-08;106!DOID:299;1.04e-07;25!DOID:1749;9.52e-07;14 | |ontology_enrichment_disease_v019=DOID:305;9.31e-08;106!DOID:299;1.04e-07;25!DOID:1749;9.52e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.74e-23,106;DOID:0050687,1.68e-15,143;DOID:299,9.46e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.02e-22!169;UBERON:0000925!1.02e-22!169;UBERON:0006595!1.02e-22!169;UBERON:0001007!3.89e-18!155;UBERON:0001555!3.89e-18!155;UBERON:0007026!3.89e-18!155;UBERON:0004921!1.25e-16!129;UBERON:0004185!1.25e-16!129;UBERON:0000077!3.66e-16!130;UBERON:0000062!3.00e-15!511;UBERON:0000466!2.14e-14!126;UBERON:0000468!4.35e-14!659;UBERON:0001041!2.06e-13!98;UBERON:0001004!1.72e-12!72;UBERON:0000464!2.73e-12!104;UBERON:0000481!1.38e-11!347;UBERON:0000064!1.38e-11!219;UBERON:0000475!2.20e-11!365;UBERON:0001048!2.48e-11!168;UBERON:0009569!1.08e-10!113;UBERON:0000467!1.68e-10!625;UBERON:0000480!2.77e-10!626;UBERON:0005911!3.21e-10!82;UBERON:0003104!4.42e-10!238;UBERON:0009142!4.42e-10!238;UBERON:0000065!3.49e-09!53;UBERON:0005177!3.19e-08!107;UBERON:0002553!3.99e-08!70;UBERON:0000922!2.47e-07!612;UBERON:0008947!3.11e-07!38;UBERON:0003258!3.11e-07!38;UBERON:0004923!6.00e-07!57;UBERON:0005631!7.99e-07!14;UBERON:0000158!7.99e-07!14;UBERON:0002365!8.10e-07!31;UBERON:0002330!8.10e-07!31;UBERON:0002530!8.20e-07!59;UBERON:0000915!9.15e-07!52 | |ontology_enrichment_uberon=UBERON:0004119!1.02e-22!169;UBERON:0000925!1.02e-22!169;UBERON:0006595!1.02e-22!169;UBERON:0001007!3.89e-18!155;UBERON:0001555!3.89e-18!155;UBERON:0007026!3.89e-18!155;UBERON:0004921!1.25e-16!129;UBERON:0004185!1.25e-16!129;UBERON:0000077!3.66e-16!130;UBERON:0000062!3.00e-15!511;UBERON:0000466!2.14e-14!126;UBERON:0000468!4.35e-14!659;UBERON:0001041!2.06e-13!98;UBERON:0001004!1.72e-12!72;UBERON:0000464!2.73e-12!104;UBERON:0000481!1.38e-11!347;UBERON:0000064!1.38e-11!219;UBERON:0000475!2.20e-11!365;UBERON:0001048!2.48e-11!168;UBERON:0009569!1.08e-10!113;UBERON:0000467!1.68e-10!625;UBERON:0000480!2.77e-10!626;UBERON:0005911!3.21e-10!82;UBERON:0003104!4.42e-10!238;UBERON:0009142!4.42e-10!238;UBERON:0000065!3.49e-09!53;UBERON:0005177!3.19e-08!107;UBERON:0002553!3.99e-08!70;UBERON:0000922!2.47e-07!612;UBERON:0008947!3.11e-07!38;UBERON:0003258!3.11e-07!38;UBERON:0004923!6.00e-07!57;UBERON:0005631!7.99e-07!14;UBERON:0000158!7.99e-07!14;UBERON:0002365!8.10e-07!31;UBERON:0002330!8.10e-07!31;UBERON:0002530!8.20e-07!59;UBERON:0000915!9.15e-07!52 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.20e-08;33!UBERON:0002365;1.42e-07;31!UBERON:0002330;1.42e-07;31!UBERON:0000065;4.87e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0004921;1.20e-08;33!UBERON:0002365;1.42e-07;31!UBERON:0002330;1.42e-07;31!UBERON:0000065;4.87e-07;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.80e-25,160;UBERON:0000925,5.80e-25,160;UBERON:0006595,5.80e-25,160;UBERON:0001007,2.54e-20,145;UBERON:0001555,2.54e-20,145;UBERON:0007026,2.54e-20,145;UBERON:0004921,2.70e-18,118;UBERON:0001041,4.93e-15,87;UBERON:0001004,1.81e-13,74;UBERON:0009569,7.00e-12,112;UBERON:0005911,2.45e-11,82;UBERON:0001048,4.41e-11,160;UBERON:0000065,1.23e-09,54;UBERON:0005177,1.46e-09,101;UBERON:0008947,8.65e-08,38;UBERON:0003258,8.65e-08,38;UBERON:0002365,1.09e-07,31;UBERON:0002330,1.09e-07,31;UBERON:0002530,1.12e-07,59;UBERON:0005631,3.35e-07,14;UBERON:0000158,3.35e-07,14;UBERON:0000072,6.11e-07,47;UBERON:0000915,6.76e-07,52 | |||
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| ||
|short_description=p2@DSP | |short_description=p2@DSP | ||
}} | }} |
Revision as of 22:46, 20 November 2012
Short description: | p2@DSP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_DSP_5end |
Coexpression cluster: | C4626_salivary_amniotic_choriocarcinoma_Keratinocyte_maxillary_cervical_esophagus |
Association with transcript: | 0bp_to_ENST00000418664, NM_001008844, NM_004415, uc003mxp.1, uc003mxq.1_5end |
EntrezGene: | DSP |
HGNC: | 3052 |
UniProt: | P15924 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.94e-36 | 253 |
endodermal cell | 6.06e-21 | 58 |
endo-epithelial cell | 2.58e-18 | 42 |
epithelial cell of alimentary canal | 6.59e-10 | 20 |
respiratory epithelial cell | 2.32e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.80e-25 | 160 |
endoderm | 5.80e-25 | 160 |
presumptive endoderm | 5.80e-25 | 160 |
digestive system | 2.54e-20 | 145 |
digestive tract | 2.54e-20 | 145 |
primitive gut | 2.54e-20 | 145 |
subdivision of digestive tract | 2.70e-18 | 118 |
foregut | 4.93e-15 | 87 |
respiratory system | 1.81e-13 | 74 |
subdivision of trunk | 7.00e-12 | 112 |
endo-epithelium | 2.45e-11 | 82 |
primordium | 4.41e-11 | 160 |
respiratory tract | 1.23e-09 | 54 |
trunk region element | 1.46e-09 | 101 |
respiratory primordium | 8.65e-08 | 38 |
endoderm of foregut | 8.65e-08 | 38 |
exocrine gland | 1.09e-07 | 31 |
exocrine system | 1.09e-07 | 31 |
gland | 1.12e-07 | 59 |
extraembryonic membrane | 3.35e-07 | 14 |
membranous layer | 3.35e-07 | 14 |
segment of respiratory tract | 6.11e-07 | 47 |
thoracic segment of trunk | 6.76e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.74e-23 | 106 |
cell type cancer | 1.68e-15 | 143 |
adenocarcinoma | 9.46e-08 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.