FFCP PHASE1:Hg19::chr1:22204962..22204969,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000222!2.44e-16!119;CL:0002139!7.21e-12!24;CL:0002078!9.09e-12!44;CL:0000213!1.43e-11!57;CL:0000215!1.43e-11!57;CL:0000115!3.39e-11!35;CL:0000055!1.17e-09!180;CL:0000220!6.51e-09!246;CL:0002321!7.02e-09!248;CL:1000413!3.25e-08!9;CL:0000071!5.05e-08!18;CL:0002546!5.05e-08!18;CL:0000057!2.75e-07!75 | |ontology_enrichment_celltype=CL:0000222!2.44e-16!119;CL:0002139!7.21e-12!24;CL:0002078!9.09e-12!44;CL:0000213!1.43e-11!57;CL:0000215!1.43e-11!57;CL:0000115!3.39e-11!35;CL:0000055!1.17e-09!180;CL:0000220!6.51e-09!246;CL:0002321!7.02e-09!248;CL:1000413!3.25e-08!9;CL:0000071!5.05e-08!18;CL:0002546!5.05e-08!18;CL:0000057!2.75e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.36e-25;36!CL:0002139;5.85e-22;24!CL:0002078;1.82e-17;45!CL:0000071;2.08e-16;18!CL:1000413;4.05e-14;9!CL:0000213;5.64e-11;58!CL:0000215;5.64e-11;58!CL:0002188;2.51e-09;5!CL:0002548;2.34e-07;6!CL:0002544;2.94e-07;6!CL:0000153;3.66e-07;9!CL:0000447;3.66e-07;9!CL:0002138;4.07e-07;6!CL:0002262;6.62e-07;2!CL:1000398;6.62e-07;2 | |ontology_enrichment_celltype_v019=CL:0000115;1.36e-25;36!CL:0002139;5.85e-22;24!CL:0002078;1.82e-17;45!CL:0000071;2.08e-16;18!CL:1000413;4.05e-14;9!CL:0000213;5.64e-11;58!CL:0000215;5.64e-11;58!CL:0002188;2.51e-09;5!CL:0002548;2.34e-07;6!CL:0002544;2.94e-07;6!CL:0000153;3.66e-07;9!CL:0000447;3.66e-07;9!CL:0002138;4.07e-07;6!CL:0002262;6.62e-07;2!CL:1000398;6.62e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.09e-28,36;CL:0002078,2.21e-26,45;CL:0002139,2.11e-22,24;CL:0000213,4.82e-21,58;CL:0000215,4.82e-21,58;CL:0000222,1.34e-16,121;CL:0000071,1.58e-16,18;CL:0002546,1.58e-16,18;CL:1000413,2.36e-14,9;CL:0002188,3.69e-09,5;CL:0002548,1.54e-07,6;CL:0005020,1.86e-07,6;CL:0002138,1.86e-07,6;CL:0005022,1.86e-07,6;CL:0002544,1.99e-07,6;CL:0000153,4.15e-07,9;CL:0000447,4.15e-07,9;CL:0002262,5.48e-07,2;CL:1000398,5.48e-07,2;CL:0002545,8.60e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;2.08e-16;18!CL:0005022;4.07e-07;6 | |ontology_enrichment_development_v019=CL:0002546;2.08e-16;18!CL:0005022;4.07e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.79e-15!84;UBERON:0000055!6.31e-14!69;UBERON:0003914!8.45e-13!118;UBERON:0001981!4.55e-12!60;UBERON:0007500!4.55e-12!60;UBERON:0004537!4.55e-12!60;UBERON:0006965!4.55e-12!60;UBERON:0002049!2.03e-11!79;UBERON:0007798!2.03e-11!79;UBERON:0001009!6.27e-10!113;UBERON:0004535!1.74e-09!110;UBERON:0006914!2.24e-09!25;UBERON:0000490!3.38e-09!138;UBERON:0001637!4.31e-09!42;UBERON:0003509!4.31e-09!42;UBERON:0004572!4.31e-09!42;UBERON:0000487!9.29e-09!22;UBERON:0003915!3.25e-08!9;UBERON:0004700!3.25e-08!9;UBERON:0001917!3.25e-08!9;UBERON:0001986!5.05e-08!18;UBERON:0004638!5.05e-08!18;UBERON:0004852!5.05e-08!18;UBERON:0005256!7.23e-08!143;UBERON:0002100!1.88e-07!216 | |ontology_enrichment_uberon=UBERON:0004872!1.79e-15!84;UBERON:0000055!6.31e-14!69;UBERON:0003914!8.45e-13!118;UBERON:0001981!4.55e-12!60;UBERON:0007500!4.55e-12!60;UBERON:0004537!4.55e-12!60;UBERON:0006965!4.55e-12!60;UBERON:0002049!2.03e-11!79;UBERON:0007798!2.03e-11!79;UBERON:0001009!6.27e-10!113;UBERON:0004535!1.74e-09!110;UBERON:0006914!2.24e-09!25;UBERON:0000490!3.38e-09!138;UBERON:0001637!4.31e-09!42;UBERON:0003509!4.31e-09!42;UBERON:0004572!4.31e-09!42;UBERON:0000487!9.29e-09!22;UBERON:0003915!3.25e-08!9;UBERON:0004700!3.25e-08!9;UBERON:0001917!3.25e-08!9;UBERON:0001986!5.05e-08!18;UBERON:0004638!5.05e-08!18;UBERON:0004852!5.05e-08!18;UBERON:0005256!7.23e-08!143;UBERON:0002100!1.88e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0006914;2.91e-18;25!UBERON:0004638;2.08e-16;18!UBERON:0001986;2.08e-16;18!UBERON:0004852;2.08e-16;18!UBERON:0000487;1.20e-15;22!UBERON:0003915;4.05e-14;9!UBERON:0004700;4.05e-14;9!UBERON:0001917;4.05e-14;9!UBERON:0000055;1.84e-09;65!UBERON:0001637;2.29e-09;42!UBERON:0003509;2.29e-09;42!UBERON:0004572;2.29e-09;42!UBERON:0000490;5.88e-09;33!UBERON:0007500;1.74e-08;56!UBERON:0001981;1.74e-08;56!UBERON:0004537;1.74e-08;56!UBERON:0004457;3.66e-07;9!UBERON:0000042;3.66e-07;9!UBERON:0002049;6.61e-07;75!UBERON:0007798;6.61e-07;75!UBERON:0001281;6.62e-07;2!UBERON:0003497;6.62e-07;2!UBERON:0003909;6.62e-07;2!UBERON:0003835;6.62e-07;2!UBERON:0003914;7.02e-07;74 | |ontology_enrichment_uberon_v019=UBERON:0006914;2.91e-18;25!UBERON:0004638;2.08e-16;18!UBERON:0001986;2.08e-16;18!UBERON:0004852;2.08e-16;18!UBERON:0000487;1.20e-15;22!UBERON:0003915;4.05e-14;9!UBERON:0004700;4.05e-14;9!UBERON:0001917;4.05e-14;9!UBERON:0000055;1.84e-09;65!UBERON:0001637;2.29e-09;42!UBERON:0003509;2.29e-09;42!UBERON:0004572;2.29e-09;42!UBERON:0000490;5.88e-09;33!UBERON:0007500;1.74e-08;56!UBERON:0001981;1.74e-08;56!UBERON:0004537;1.74e-08;56!UBERON:0004457;3.66e-07;9!UBERON:0000042;3.66e-07;9!UBERON:0002049;6.61e-07;75!UBERON:0007798;6.61e-07;75!UBERON:0001281;6.62e-07;2!UBERON:0003497;6.62e-07;2!UBERON:0003909;6.62e-07;2!UBERON:0003835;6.62e-07;2!UBERON:0003914;7.02e-07;74 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006914,2.05e-18,25;UBERON:0004872,8.76e-17,83;UBERON:0000055,9.39e-17,68;UBERON:0004638,1.58e-16,18;UBERON:0001986,1.58e-16,18;UBERON:0004852,1.58e-16,18;UBERON:0000487,9.52e-16,22;UBERON:0003915,2.36e-14,9;UBERON:0004700,2.36e-14,9;UBERON:0001917,2.36e-14,9;UBERON:0003914,4.60e-14,117;UBERON:0002049,8.90e-14,78;UBERON:0007798,8.90e-14,78;UBERON:0007500,2.25e-13,59;UBERON:0001981,2.25e-13,59;UBERON:0004537,2.25e-13,59;UBERON:0006965,2.25e-13,59;UBERON:0004535,2.65e-13,109;UBERON:0001009,9.61e-13,112;UBERON:0001637,2.70e-09,42;UBERON:0003509,2.70e-09,42;UBERON:0004572,2.70e-09,42;UBERON:0004876,1.50e-08,11;UBERON:0004111,5.26e-07,240;UBERON:0001281,5.48e-07,2;UBERON:0003497,5.48e-07,2;UBERON:0003909,5.48e-07,2;UBERON:0003835,5.48e-07,2;UBERON:0005800,8.60e-07,2;UBERON:0001515,8.60e-07,2;UBERON:0003513,9.55e-07,7 | |||
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| ||
|short_description=p4@HSPG2 | |short_description=p4@HSPG2 | ||
}} | }} |
Revision as of 08:22, 20 November 2012
Short description: | p4@HSPG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_HSPG2_5end |
Coexpression cluster: | C547_Renal_Endothelial_Mesenchymal_Hepatic_Smooth_Fibroblast_Alveolar |
Association with transcript: | -270bp_to_S76436_5end |
EntrezGene: | HSPG2 |
HGNC: | 5273 |
UniProt: | P98160 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.09e-28 | 36 |
meso-epithelial cell | 2.21e-26 | 45 |
endothelial cell of vascular tree | 2.11e-22 | 24 |
lining cell | 4.82e-21 | 58 |
barrier cell | 4.82e-21 | 58 |
mesodermal cell | 1.34e-16 | 121 |
blood vessel endothelial cell | 1.58e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.58e-16 | 18 |
endothelial cell of artery | 2.36e-14 | 9 |
glomerular endothelial cell | 3.69e-09 | 5 |
cardiac fibroblast | 1.54e-07 | 6 |
lymphangioblast | 1.86e-07 | 6 |
endothelial cell of lymphatic vessel | 1.86e-07 | 6 |
vascular lymphangioblast | 1.86e-07 | 6 |
aortic endothelial cell | 1.99e-07 | 6 |
GAG secreting cell | 4.15e-07 | 9 |
carbohydrate secreting cell | 4.15e-07 | 9 |
endothelial cell of sinusoid | 5.48e-07 | 2 |
endothelial cell of hepatic sinusoid | 5.48e-07 | 2 |
thoracic aorta endothelial cell | 8.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous epithelium | 2.05e-18 | 25 |
splanchnic layer of lateral plate mesoderm | 8.76e-17 | 83 |
vessel | 9.39e-17 | 68 |
blood vessel endothelium | 1.58e-16 | 18 |
endothelium | 1.58e-16 | 18 |
cardiovascular system endothelium | 1.58e-16 | 18 |
simple squamous epithelium | 9.52e-16 | 22 |
endothelial tube | 2.36e-14 | 9 |
arterial system endothelium | 2.36e-14 | 9 |
endothelium of artery | 2.36e-14 | 9 |
epithelial tube | 4.60e-14 | 117 |
vasculature | 8.90e-14 | 78 |
vascular system | 8.90e-14 | 78 |
epithelial tube open at both ends | 2.25e-13 | 59 |
blood vessel | 2.25e-13 | 59 |
blood vasculature | 2.25e-13 | 59 |
vascular cord | 2.25e-13 | 59 |
cardiovascular system | 2.65e-13 | 109 |
circulatory system | 9.61e-13 | 112 |
artery | 2.70e-09 | 42 |
arterial blood vessel | 2.70e-09 | 42 |
arterial system | 2.70e-09 | 42 |
urogenital ridge | 1.50e-08 | 11 |
anatomical conduit | 5.26e-07 | 240 |
hepatic sinusoid | 5.48e-07 | 2 |
abdomen blood vessel | 5.48e-07 | 2 |
sinusoid | 5.48e-07 | 2 |
abdominal segment blood vessel | 5.48e-07 | 2 |
segment of aorta | 8.60e-07 | 2 |
thoracic aorta | 8.60e-07 | 2 |
trunk blood vessel | 9.55e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.