FFCP PHASE1:Hg19::chr6:105404899..105404931,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002322!1.81e-10!5;CL:0000133!5.30e-10!59;CL:0000333!1.69e-07!41;CL:0000221!2.10e-07!71 | |ontology_enrichment_celltype=CL:0002322!1.81e-10!5;CL:0000133!5.30e-10!59;CL:0000333!1.69e-07!41;CL:0000221!2.10e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.84e-15;5!CL:0002321;2.78e-11;15!CL:0002319;8.18e-09;25!CL:0000123;7.06e-07;2!CL:0000242;7.06e-07;2 | |ontology_enrichment_celltype_v019=CL:0002322;5.84e-15;5!CL:0002321;2.78e-11;15!CL:0002319;8.18e-09;25!CL:0000123;7.06e-07;2!CL:0000242;7.06e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.94e-15,5;CL:0002319,9.72e-09,25;CL:0000333,1.52e-08,41;CL:0000133,2.41e-08,59;CL:0000242,5.66e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!1.28e-23!239;DOID:162!1.96e-22!235;DOID:3095!1.10e-17!22;DOID:2994!1.10e-17!22;DOID:0050687!2.56e-11!143;DOID:171!6.85e-11!10;DOID:169!1.06e-10!6;DOID:1240!2.87e-10!39;DOID:2531!4.75e-10!51;DOID:0060083!4.75e-10!51;DOID:0050686!3.70e-09!137;DOID:8692!5.99e-07!31;DOID:1036!9.41e-07!8 | |ontology_enrichment_disease=DOID:14566!1.28e-23!239;DOID:162!1.96e-22!235;DOID:3095!1.10e-17!22;DOID:2994!1.10e-17!22;DOID:0050687!2.56e-11!143;DOID:171!6.85e-11!10;DOID:169!1.06e-10!6;DOID:1240!2.87e-10!39;DOID:2531!4.75e-10!51;DOID:0060083!4.75e-10!51;DOID:0050686!3.70e-09!137;DOID:8692!5.99e-07!31;DOID:1036!9.41e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.94e-13;22!DOID:2994;2.94e-13;22!DOID:1036;4.53e-10;8!DOID:8692;9.95e-10;31!DOID:171;1.05e-09;10!DOID:1240;1.24e-08;39!DOID:169;1.15e-07;6!DOID:2531;1.98e-07;51!DOID:0060083;1.98e-07;51!DOID:74;7.06e-07;2 | |ontology_enrichment_disease_v019=DOID:3095;2.94e-13;22!DOID:2994;2.94e-13;22!DOID:1036;4.53e-10;8!DOID:8692;9.95e-10;31!DOID:171;1.05e-09;10!DOID:1240;1.24e-08;39!DOID:169;1.15e-07;6!DOID:2531;1.98e-07;51!DOID:0060083;1.98e-07;51!DOID:74;7.06e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:14566,2.16e-18,239;DOID:162,7.06e-17,235;DOID:3095,3.21e-13,22;DOID:2994,3.21e-13,22;DOID:1240,2.65e-10,39;DOID:1036,5.42e-10,8;DOID:8692,6.77e-10,31;DOID:2531,7.97e-10,51;DOID:0060083,7.97e-10,51;DOID:171,1.39e-09,10;DOID:0050687,1.03e-08,143;DOID:0050686,1.04e-07,137;DOID:169,1.40e-07,6;DOID:74,9.64e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000010!1.14e-09!8;UBERON:0000013!3.10e-09!5;UBERON:0002410!3.10e-09!5 | |ontology_enrichment_uberon=UBERON:0000010!1.14e-09!8;UBERON:0000013!3.10e-09!5;UBERON:0002410!3.10e-09!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000010;4.96e-08;8 | |ontology_enrichment_uberon_v019=UBERON:0000010;4.96e-08;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,6.21e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82960559194393,2.78312513475119,3.25343040034651,3.21349270547648,3.28017106138317,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07471096357784,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,3.98836183652353,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95249063171651,0,0.980160863924127,0,0,1.28055318027145,0,0,0,0,2.921597462471,0,1.14117339516596,0,7.51903431270201,0,0,2.62339619348362,0,0,0,0,0,0,6.40334199959057,0,2.43410110628385,3.3307196799782,0,0,0,0.121360521749513,0.334330152832435,0,0,0,0,0,0,0,0,3.58913193817589,0,0,0,0,2.8309505256046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,1.45802306691627,0.868124974666461,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,2.04386596391473,0,0.166211681900156,11.279783030859,11.1755644561112,10.7405815664539,15.370052350659,0,0,0,3.25112064298064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,4.35937916302028,5.39178595265685,2.65861549082874,0.661983911750998,1.88359751044335,1.19472429772959,1.99226682220855,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0.596143835108969,0,0,1.20238230377301,0,0,0,0,0,0,0,0,0,0,0,1.15580235960608,0,0,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,15.144473438569,8.19345095995126,7.99433826297315,8.08842526250219,0,4.06431993915765,0,0,3.21506296930038,1.37539436597234,2.07720169014593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22412889249628,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,2.49027542885215,1.24980407962107,1.21319294033318,0,0,4.68334905806882,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06691729694141,0,0,0,0,0.622077260032973,2.04630994085843,1.94084660514027,0.471797825567689,2.18419276384028,2.20652288940233,2.33832412111851,0,0.558644917973244,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0710797781803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,1.21393120847326,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,2.90603563420313,2.95559062914385,0,0,0,0,0,3.0766320189947,3.06768257132968,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0,2.11347980993343,0,0,0,0,1.17838273550813,0,0,0,0,0,0.0644578879735772,1.39917618294901,0,0.352894871715692,0,0,0,0,0,0,0,0.5290268405154,0,0,0,1.38783067318587,2.62237372712869,0.126698501011437,0.713921808193872,1.3360870263278,3.21632148371957,1.50424523575425,0,0,0,0,0,0,0,0.31037357147929,0,0,0,0,0,0,0,0,0.0814032686109745,0.426909383510862,0,0.179650404213174,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82960559194393,2.78312513475119,3.25343040034651,3.21349270547648,3.28017106138317,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07471096357784,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,3.98836183652353,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95249063171651,0,0.980160863924127,0,0,1.28055318027145,0,0,0,0,2.921597462471,0,1.14117339516596,0,7.51903431270201,0,0,2.62339619348362,0,0,0,0,0,0,6.40334199959057,0,2.43410110628385,3.3307196799782,0,0,0,0.121360521749513,0.334330152832435,0,0,0,0,0,0,0,0,3.58913193817589,0,0,0,0,2.8309505256046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,1.45802306691627,0.868124974666461,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,2.04386596391473,0,0.166211681900156,11.279783030859,11.1755644561112,10.7405815664539,15.370052350659,0,0,0,3.25112064298064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,4.35937916302028,5.39178595265685,2.65861549082874,0.661983911750998,1.88359751044335,1.19472429772959,1.99226682220855,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0.596143835108969,0,0,1.20238230377301,0,0,0,0,0,0,0,0,0,0,0,1.15580235960608,0,0,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,15.144473438569,8.19345095995126,7.99433826297315,8.08842526250219,0,4.06431993915765,0,0,3.21506296930038,1.37539436597234,2.07720169014593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22412889249628,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,2.49027542885215,1.24980407962107,1.21319294033318,0,0,4.68334905806882,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06691729694141,0,0,0,0,0.622077260032973,2.04630994085843,1.94084660514027,0.471797825567689,2.18419276384028,2.20652288940233,2.33832412111851,0,0.558644917973244,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0710797781803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,1.21393120847326,0,0.0887023701626388,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,2.90603563420313,2.95559062914385,0,0,0,0,0,3.0766320189947,3.06768257132968,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0,2.11347980993343,0,0,0,0,1.17838273550813,0,0,0,0,0,0.0644578879735772,1.39917618294901,0,0.352894871715692,0,0,0,0,0,0,0,0.5290268405154,0,0,0,1.38783067318587,2.62237372712869,0.126698501011437,0.713921808193872,1.3360870263278,3.21632148371957,1.50424523575425,0,0,0,0,0,0,0,0.31037357147929,0,0,0,0,0,0,0,0,0.0814032686109745,0.426909383510862,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p3@LIN28B | |short_description=p3@LIN28B | ||
}} | }} |
Revision as of 00:07, 20 November 2012
Short description: | p3@LIN28B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LIN28B_5end |
Coexpression cluster: | C1967_anaplastic_embryonic_hepatoblastoma_chronic_hepatocellular_Wilms_hereditary |
Association with transcript: | 0bp_to_ENST00000345080, NM_001004317, uc003pqv.1_5end |
EntrezGene: | LIN28B |
HGNC: | 32207 |
UniProt: | Q6ZN17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.94e-15 | 5 |
neural cell | 9.72e-09 | 25 |
migratory neural crest cell | 1.52e-08 | 41 |
neurectodermal cell | 2.41e-08 | 59 |
Merkel cell | 5.66e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 6.21e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.16e-18 | 239 |
cancer | 7.06e-17 | 235 |
germ cell and embryonal cancer | 3.21e-13 | 22 |
germ cell cancer | 3.21e-13 | 22 |
leukemia | 2.65e-10 | 39 |
chronic leukemia | 5.42e-10 | 8 |
myeloid leukemia | 6.77e-10 | 31 |
hematologic cancer | 7.97e-10 | 51 |
immune system cancer | 7.97e-10 | 51 |
neuroectodermal tumor | 1.39e-09 | 10 |
cell type cancer | 1.03e-08 | 143 |
organ system cancer | 1.04e-07 | 137 |
neuroendocrine tumor | 1.40e-07 | 6 |
hematopoietic system disease | 9.64e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.