FFCP PHASE1:Hg19::chr12:52642530..52642567,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!5.04e-37!254;CL:0000077!4.28e-11!19;CL:0000076!1.28e-10!62;CL:0000063!2.82e-10!578;CL:0002076!3.19e-10!43;CL:0002368!1.14e-09!13 | |ontology_enrichment_celltype=CL:0000066!5.04e-37!254;CL:0000077!4.28e-11!19;CL:0000076!1.28e-10!62;CL:0000063!2.82e-10!578;CL:0002076!3.19e-10!43;CL:0002368!1.14e-09!13 | ||
|ontology_enrichment_celltype_v019=CL:0000077;3.77e-19;19!CL:0002368;3.64e-09;13!CL:0002577;4.88e-08;3 | |ontology_enrichment_celltype_v019=CL:0000077;3.77e-19;19!CL:0002368;3.64e-09;13!CL:0002577;4.88e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.74e-28,253;CL:0000077,3.26e-19,19;CL:0002368,3.58e-09,13;CL:0000076,1.17e-08,63;CL:0002577,3.61e-08,3;CL:0002076,7.11e-08,42;CL:0000213,2.10e-07,58;CL:0000215,2.10e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.34e-13;29 | |ontology_enrichment_development_v019=UBERON:0008947;7.34e-13;29 | ||
|ontology_enrichment_disease=DOID:305!2.20e-13!106;DOID:0050687!2.83e-09!143 | |ontology_enrichment_disease=DOID:305!2.20e-13!106;DOID:0050687!2.83e-09!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,3.69e-13,106;DOID:0050687,9.50e-09,143;DOID:162,9.92e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.13e-13!169;UBERON:0000925!4.13e-13!169;UBERON:0006595!4.13e-13!169;UBERON:0000065!4.65e-13!53;UBERON:0008947!5.03e-13!38;UBERON:0003258!5.03e-13!38;UBERON:0001737!2.19e-11!9;UBERON:0000077!2.03e-10!130;UBERON:0000072!1.50e-09!46;UBERON:0001004!3.17e-09!72;UBERON:0000464!8.64e-09!104;UBERON:0001048!1.00e-08!168;UBERON:0005153!4.56e-08!37;UBERON:0005631!6.86e-08!14;UBERON:0000158!6.86e-08!14;UBERON:0001041!8.35e-08!98;UBERON:0001007!9.29e-08!155;UBERON:0001555!9.29e-08!155;UBERON:0007026!9.29e-08!155;UBERON:0005911!1.05e-07!82;UBERON:0003124!1.09e-07!7;UBERON:0000466!2.54e-07!126;UBERON:0004921!6.03e-07!129;UBERON:0004185!6.03e-07!129 | |ontology_enrichment_uberon=UBERON:0004119!4.13e-13!169;UBERON:0000925!4.13e-13!169;UBERON:0006595!4.13e-13!169;UBERON:0000065!4.65e-13!53;UBERON:0008947!5.03e-13!38;UBERON:0003258!5.03e-13!38;UBERON:0001737!2.19e-11!9;UBERON:0000077!2.03e-10!130;UBERON:0000072!1.50e-09!46;UBERON:0001004!3.17e-09!72;UBERON:0000464!8.64e-09!104;UBERON:0001048!1.00e-08!168;UBERON:0005153!4.56e-08!37;UBERON:0005631!6.86e-08!14;UBERON:0000158!6.86e-08!14;UBERON:0001041!8.35e-08!98;UBERON:0001007!9.29e-08!155;UBERON:0001555!9.29e-08!155;UBERON:0007026!9.29e-08!155;UBERON:0005911!1.05e-07!82;UBERON:0003124!1.09e-07!7;UBERON:0000466!2.54e-07!126;UBERON:0004921!6.03e-07!129;UBERON:0004185!6.03e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.69e-23;9!UBERON:0001557;6.69e-23;9!UBERON:0000065;3.53e-14;44!UBERON:0000072;3.52e-11;37 | |ontology_enrichment_uberon_v019=UBERON:0001737;6.69e-23;9!UBERON:0001557;6.69e-23;9!UBERON:0000065;3.53e-14;44!UBERON:0000072;3.52e-11;37 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.57e-23,9;UBERON:0000065,7.54e-15,54;UBERON:0008947,2.42e-14,38;UBERON:0003258,2.42e-14,38;UBERON:0001557,2.22e-12,19;UBERON:0004119,4.58e-12,160;UBERON:0000925,4.58e-12,160;UBERON:0006595,4.58e-12,160;UBERON:0000072,7.47e-11,47;UBERON:0001004,1.82e-09,74;UBERON:0001041,2.50e-07,87;UBERON:0001007,3.23e-07,145;UBERON:0001555,3.23e-07,145;UBERON:0007026,3.23e-07,145;UBERON:0004921,7.73e-07,118 | |||
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| ||
|short_description=p@chr12:52642530..52642567,+ | |short_description=p@chr12:52642530..52642567,+ | ||
}} | }} |
Revision as of 23:24, 19 November 2012
Short description: | p@chr12:52642530..52642567, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:52642530..52642567, + |
Coexpression cluster: | C689_Alveolar_mesothelioma_Retinal_Mesothelial_Prostate_bile_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.74e-28 | 253 |
mesothelial cell | 3.26e-19 | 19 |
respiratory epithelial cell | 3.58e-09 | 13 |
squamous epithelial cell | 1.17e-08 | 63 |
placental epithelial cell | 3.61e-08 | 3 |
endo-epithelial cell | 7.11e-08 | 42 |
lining cell | 2.10e-07 | 58 |
barrier cell | 2.10e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.57e-23 | 9 |
respiratory tract | 7.54e-15 | 54 |
respiratory primordium | 2.42e-14 | 38 |
endoderm of foregut | 2.42e-14 | 38 |
upper respiratory tract | 2.22e-12 | 19 |
endoderm-derived structure | 4.58e-12 | 160 |
endoderm | 4.58e-12 | 160 |
presumptive endoderm | 4.58e-12 | 160 |
segment of respiratory tract | 7.47e-11 | 47 |
respiratory system | 1.82e-09 | 74 |
foregut | 2.50e-07 | 87 |
digestive system | 3.23e-07 | 145 |
digestive tract | 3.23e-07 | 145 |
primitive gut | 3.23e-07 | 145 |
subdivision of digestive tract | 7.73e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.69e-13 | 106 |
cell type cancer | 9.50e-09 | 143 |
cancer | 9.92e-07 | 235 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.