FFCP PHASE1:Hg19::chr2:224849648..224849677,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.56e-22!180;CL:0000057!1.91e-14!75;CL:0002620!6.09e-09!23;CL:0000359!6.56e-08!32;CL:0000680!1.68e-07!57;CL:0000056!1.68e-07!57;CL:0000355!1.68e-07!57;CL:0000192!8.22e-07!42;CL:0000514!8.22e-07!42 | |ontology_enrichment_celltype=CL:0000055!2.56e-22!180;CL:0000057!1.91e-14!75;CL:0002620!6.09e-09!23;CL:0000359!6.56e-08!32;CL:0000680!1.68e-07!57;CL:0000056!1.68e-07!57;CL:0000355!1.68e-07!57;CL:0000192!8.22e-07!42;CL:0000514!8.22e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.02e-11;23!CL:0000499;4.66e-08;28!CL:0002334;8.00e-08;12!CL:0000153;9.15e-07;9!CL:0000447;9.15e-07;9 | |ontology_enrichment_celltype_v019=CL:0002620;1.02e-11;23!CL:0000499;4.66e-08;28!CL:0002334;8.00e-08;12!CL:0000153;9.15e-07;9!CL:0000447;9.15e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.34e-16,76;CL:0002620,1.26e-11,23;CL:0000034,8.48e-09,441;CL:0000723,8.92e-09,433;CL:0000048,1.46e-08,427;CL:0000499,4.30e-08,28;CL:0002334,6.84e-08,12;CL:0000153,8.83e-07,9;CL:0000447,8.83e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;8.88e-07;5!DOID:450;8.88e-07;5!DOID:66;8.88e-07;5!DOID:423;8.88e-07;5!DOID:0080000;8.88e-07;5!DOID:11722;8.88e-07;5 | |ontology_enrichment_disease_v019=DOID:17;8.88e-07;5!DOID:450;8.88e-07;5!DOID:66;8.88e-07;5!DOID:423;8.88e-07;5!DOID:0080000;8.88e-07;5!DOID:11722;8.88e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,9.12e-07,5;DOID:450,9.12e-07,5;DOID:66,9.12e-07,5;DOID:423,9.12e-07,5;DOID:0080000,9.12e-07,5;DOID:11722,9.12e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000475!7.05e-13!365;UBERON:0000486!4.24e-09!82;UBERON:0000914!5.60e-09!83;UBERON:0002329!5.60e-09!83;UBERON:0003077!5.60e-09!83;UBERON:0003059!5.60e-09!83;UBERON:0007282!5.60e-09!83;UBERON:0009618!5.60e-09!83;UBERON:0007285!5.60e-09!83;UBERON:0002199!7.77e-09!45;UBERON:0002416!7.77e-09!45;UBERON:0003102!8.16e-09!95;UBERON:0002097!8.55e-09!40;UBERON:0000468!2.16e-08!659;UBERON:0001637!6.18e-08!42;UBERON:0003509!6.18e-08!42;UBERON:0004572!6.18e-08!42;UBERON:0004290!1.83e-07!70;UBERON:0004573!2.89e-07!33;UBERON:0004571!2.89e-07!33 | |ontology_enrichment_uberon=UBERON:0000475!7.05e-13!365;UBERON:0000486!4.24e-09!82;UBERON:0000914!5.60e-09!83;UBERON:0002329!5.60e-09!83;UBERON:0003077!5.60e-09!83;UBERON:0003059!5.60e-09!83;UBERON:0007282!5.60e-09!83;UBERON:0009618!5.60e-09!83;UBERON:0007285!5.60e-09!83;UBERON:0002199!7.77e-09!45;UBERON:0002416!7.77e-09!45;UBERON:0003102!8.16e-09!95;UBERON:0002097!8.55e-09!40;UBERON:0000468!2.16e-08!659;UBERON:0001637!6.18e-08!42;UBERON:0003509!6.18e-08!42;UBERON:0004572!6.18e-08!42;UBERON:0004290!1.83e-07!70;UBERON:0004573!2.89e-07!33;UBERON:0004571!2.89e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.29e-10;9!UBERON:0000042;9.29e-10;9!UBERON:0002097;6.17e-09;41!UBERON:0003688;7.64e-09;6!UBERON:0002358;7.64e-09;6!UBERON:0003684;7.64e-09;6!UBERON:0001178;7.64e-09;6!UBERON:0002199;5.07e-08;46!UBERON:0002416;5.07e-08;46 | |ontology_enrichment_uberon_v019=UBERON:0004457;9.29e-10;9!UBERON:0000042;9.29e-10;9!UBERON:0002097;6.17e-09;41!UBERON:0003688;7.64e-09;6!UBERON:0002358;7.64e-09;6!UBERON:0003684;7.64e-09;6!UBERON:0001178;7.64e-09;6!UBERON:0002199;5.07e-08;46!UBERON:0002416;5.07e-08;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.36e-11,41;UBERON:0002199,2.63e-11,46;UBERON:0002416,2.63e-11,46;UBERON:0003688,7.45e-09,6;UBERON:0002358,7.45e-09,6;UBERON:0003684,7.45e-09,6;UBERON:0001178,7.45e-09,6;UBERON:0003102,1.88e-08,99;UBERON:0004923,7.31e-07,66;UBERON:0004457,9.03e-07,12;UBERON:0000042,9.03e-07,12 | |||
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| ||
|short_description=p3@SERPINE2 | |short_description=p3@SERPINE2 | ||
}} | }} |
Revision as of 21:25, 19 November 2012
Short description: | p3@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SERPINE2_5end |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | 107bp_to_ENST00000478966_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.34e-16 | 76 |
skin fibroblast | 1.26e-11 | 23 |
stem cell | 8.48e-09 | 441 |
somatic stem cell | 8.92e-09 | 433 |
multi fate stem cell | 1.46e-08 | 427 |
stromal cell | 4.30e-08 | 28 |
preadipocyte | 6.84e-08 | 12 |
GAG secreting cell | 8.83e-07 | 9 |
carbohydrate secreting cell | 8.83e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.36e-11 | 41 |
integument | 2.63e-11 | 46 |
integumental system | 2.63e-11 | 46 |
omentum | 7.45e-09 | 6 |
peritoneum | 7.45e-09 | 6 |
abdominal cavity | 7.45e-09 | 6 |
visceral peritoneum | 7.45e-09 | 6 |
surface structure | 1.88e-08 | 99 |
organ component layer | 7.31e-07 | 66 |
cavity lining | 9.03e-07 | 12 |
serous membrane | 9.03e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.12e-07 | 5 |
myotonic disease | 9.12e-07 | 5 |
muscle tissue disease | 9.12e-07 | 5 |
myopathy | 9.12e-07 | 5 |
muscular disease | 9.12e-07 | 5 |
myotonic dystrophy | 9.12e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.