FFCP PHASE1:Hg19::chr6:56485129..56485140,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002076!3.74e-14!43;CL:0000066!7.58e-14!254;CL:0000223!1.56e-13!59;CL:0002251!1.54e-10!21;CL:0000076!5.55e-08!62 | |ontology_enrichment_celltype=CL:0002076!3.74e-14!43;CL:0000066!7.58e-14!254;CL:0000223!1.56e-13!59;CL:0002251!1.54e-10!21;CL:0000076!5.55e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0002076;9.25e-27;42!CL:0002251;1.02e-19;20!CL:0002623;3.29e-16;3!CL:0002231;6.49e-16;3!CL:0002336;2.60e-12;1!CL:0002261;2.60e-12;1!CL:0002170;2.60e-12;1!CL:0002327;4.08e-12;4!CL:0000622;4.25e-10;5!CL:0000154;1.47e-08;6!CL:0002368;3.00e-08;13!CL:0000240;3.02e-08;6!CL:0000311;3.02e-08;6!CL:0000079;3.02e-08;6!CL:0000237;3.02e-08;6 | |ontology_enrichment_celltype_v019=CL:0002076;9.25e-27;42!CL:0002251;1.02e-19;20!CL:0002623;3.29e-16;3!CL:0002231;6.49e-16;3!CL:0002336;2.60e-12;1!CL:0002261;2.60e-12;1!CL:0002170;2.60e-12;1!CL:0002327;4.08e-12;4!CL:0000622;4.25e-10;5!CL:0000154;1.47e-08;6!CL:0002368;3.00e-08;13!CL:0000240;3.02e-08;6!CL:0000311;3.02e-08;6!CL:0000079;3.02e-08;6!CL:0000237;3.02e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.21e-30,42;CL:0000223,5.66e-26,58;CL:0002251,9.08e-20,20;CL:0002623,3.18e-16,3;CL:0002231,6.74e-16,3;CL:0002336,1.75e-12,1;CL:0002261,1.75e-12,1;CL:0002170,1.75e-12,1;CL:0002327,5.40e-12,4;CL:0000066,5.57e-12,253;CL:0000622,4.16e-10,5;CL:0000154,1.44e-08,6;CL:0002368,2.36e-08,13;CL:0000240,2.61e-08,6;CL:0000311,2.61e-08,6;CL:0000079,2.61e-08,6;CL:0000237,2.61e-08,6;CL:0000036,2.61e-08,6;CL:0000357,2.61e-08,6;CL:0000114,2.61e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000223;3.69e-12;58!CL:0000357;3.02e-08;6!CL:0000114;3.02e-08;6 | |ontology_enrichment_development_v019=CL:0000223;3.69e-12;58!CL:0000357;3.02e-08;6!CL:0000114;3.02e-08;6 | ||
|ontology_enrichment_disease=DOID:1749!3.55e-15!14;DOID:0050687!1.34e-09!143;DOID:305!3.32e-09!106;DOID:162!1.06e-07!235;DOID:14566!3.10e-07!239 | |ontology_enrichment_disease=DOID:1749!3.55e-15!14;DOID:0050687!1.34e-09!143;DOID:305!3.32e-09!106;DOID:162!1.06e-07!235;DOID:14566!3.10e-07!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003729!9.35e-09!5;UBERON:0000161!9.39e-09!35;UBERON:0001004!1.27e-08!72;UBERON:0003343!3.19e-07!4;UBERON:0004785!3.19e-07!4;UBERON:0005153!4.87e-07!37;UBERON:0003937!9.84e-07!12;UBERON:0005399!9.84e-07!12 | |ontology_enrichment_uberon=UBERON:0003729!9.35e-09!5;UBERON:0000161!9.39e-09!35;UBERON:0001004!1.27e-08!72;UBERON:0003343!3.19e-07!4;UBERON:0004785!3.19e-07!4;UBERON:0005153!4.87e-07!37;UBERON:0003937!9.84e-07!12;UBERON:0005399!9.84e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0001911;4.08e-12;4!UBERON:0000165;6.12e-10;28!UBERON:0000161;9.59e-10;19!UBERON:0000166;9.59e-10;19!UBERON:0002365;5.83e-09;31!UBERON:0002330;5.83e-09;31!UBERON:0001044;1.47e-08;6!UBERON:0003293;1.47e-08;6!UBERON:0003294;1.47e-08;6!UBERON:0010047;1.47e-08;6!UBERON:0003408;1.47e-08;6!UBERON:0000167;1.47e-08;6!UBERON:0003729;3.00e-08;13!UBERON:0006562;8.76e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001911;4.08e-12;4!UBERON:0000165;6.12e-10;28!UBERON:0000161;9.59e-10;19!UBERON:0000166;9.59e-10;19!UBERON:0002365;5.83e-09;31!UBERON:0002330;5.83e-09;31!UBERON:0001044;1.47e-08;6!UBERON:0003293;1.47e-08;6!UBERON:0003294;1.47e-08;6!UBERON:0010047;1.47e-08;6!UBERON:0003408;1.47e-08;6!UBERON:0000167;1.47e-08;6!UBERON:0003729;3.00e-08;13!UBERON:0006562;8.76e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000076,5.95e-13,8;UBERON:0001911,5.40e-12,4;UBERON:0005333,5.40e-12,4;UBERON:0008425,5.40e-12,4;UBERON:0005311,5.40e-12,4;UBERON:0000161,6.49e-11,36;UBERON:0004119,7.99e-10,160;UBERON:0000925,7.99e-10,160;UBERON:0006595,7.99e-10,160;UBERON:0000165,1.17e-09,29;UBERON:0000930,1.17e-09,29;UBERON:0002365,6.49e-09,31;UBERON:0002330,6.49e-09,31;UBERON:0002530,1.28e-08,59;UBERON:0001044,1.44e-08,6;UBERON:0003293,1.44e-08,6;UBERON:0003294,1.44e-08,6;UBERON:0010047,1.44e-08,6;UBERON:0000167,1.44e-08,6;UBERON:0000166,1.77e-08,22;UBERON:0003729,2.49e-08,13;UBERON:0001444,7.26e-08,49;UBERON:0000033,7.91e-07,56;UBERON:0001004,8.18e-07,74 | |||
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| ||
|short_description=p@chr6:56485129..56485140,- | |short_description=p@chr6:56485129..56485140,- | ||
}} | }} |
Revision as of 09:02, 19 November 2012
Short description: | p@chr6:56485129..56485140, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:56485129..56485140, - |
Coexpression cluster: | C457_salivary_Prostate_oral_Small_Keratinocyte_Urothelial_Mammary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.21e-30 | 42 |
endodermal cell | 5.66e-26 | 58 |
epithelial cell of alimentary canal | 9.08e-20 | 20 |
acinar cell of salivary gland | 3.18e-16 | 3 |
epithelial cell of prostate | 6.74e-16 | 3 |
buccal mucosa cell | 1.75e-12 | 1 |
endothelial cell of viscerocranial mucosa | 1.75e-12 | 1 |
keratinized cell of the oral mucosa | 1.75e-12 | 1 |
mammary gland epithelial cell | 5.40e-12 | 4 |
epithelial cell | 5.57e-12 | 253 |
acinar cell | 4.16e-10 | 5 |
protein secreting cell | 1.44e-08 | 6 |
respiratory epithelial cell | 2.36e-08 | 13 |
stratified squamous epithelial cell | 2.61e-08 | 6 |
keratin accumulating cell | 2.61e-08 | 6 |
stratified epithelial cell | 2.61e-08 | 6 |
keratinizing barrier epithelial cell | 2.61e-08 | 6 |
epithelial fate stem cell | 2.61e-08 | 6 |
stratified epithelial stem cell | 2.61e-08 | 6 |
surface ectodermal cell | 2.61e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
external ectoderm | 5.95e-13 | 8 |
mammary gland | 5.40e-12 | 4 |
mammary bud | 5.40e-12 | 4 |
mammary ridge | 5.40e-12 | 4 |
mammary placode | 5.40e-12 | 4 |
orifice | 6.49e-11 | 36 |
endoderm-derived structure | 7.99e-10 | 160 |
endoderm | 7.99e-10 | 160 |
presumptive endoderm | 7.99e-10 | 160 |
mouth | 1.17e-09 | 29 |
stomodeum | 1.17e-09 | 29 |
exocrine gland | 6.49e-09 | 31 |
exocrine system | 6.49e-09 | 31 |
gland | 1.28e-08 | 59 |
saliva-secreting gland | 1.44e-08 | 6 |
gland of oral region | 1.44e-08 | 6 |
gland of foregut | 1.44e-08 | 6 |
oral gland | 1.44e-08 | 6 |
oral cavity | 1.44e-08 | 6 |
oral opening | 1.77e-08 | 22 |
mouth mucosa | 2.49e-08 | 13 |
subdivision of head | 7.26e-08 | 49 |
head | 7.91e-07 | 56 |
respiratory system | 8.18e-07 | 74 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.