FFCP PHASE1:Hg19::chrX:7137475..7137504,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000039!2.43e-20!7;CL:0000586!2.43e-20!7;CL:0002541!5.47e-18!3;CL:0002563!9.53e-07!4 | |ontology_enrichment_celltype=CL:0000039!2.43e-20!7;CL:0000586!2.43e-20!7;CL:0002541!5.47e-18!3;CL:0002563!9.53e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.78e-39;3!CL:0000039;6.60e-18;7!CL:0000586;6.60e-18;7!CL:0002563;3.73e-14;4!CL:0002253;5.37e-08;2!CL:0000349;9.45e-07;19 | |ontology_enrichment_celltype_v019=CL:0002541;1.78e-39;3!CL:0000039;6.60e-18;7!CL:0000586;6.60e-18;7!CL:0002563;3.73e-14;4!CL:0002253;5.37e-08;2!CL:0000349;9.45e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.46e-39,3;CL:0000039,6.60e-18,7;CL:0000586,6.60e-18,7;CL:0002563,3.85e-14,4;CL:0002253,5.37e-08,2;CL:0000349,9.17e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.73e-15;1!UBERON:0008425;1.23e-14;1 | |ontology_enrichment_development_v019=UBERON:0003124;4.73e-15;1!UBERON:0008425;1.23e-14;1 | ||
|ontology_enrichment_disease=DOID:1799!3.78e-07!1;DOID:10165!3.78e-07!1;DOID:1798!3.78e-07!1;DOID:178!6.76e-07!1;DOID:326!6.76e-07!1;DOID:3978!6.76e-07!1;DOID:3394!6.76e-07!1;DOID:5844!6.76e-07!1;DOID:4960!9.51e-07!1;DOID:0070004!9.51e-07!1 | |ontology_enrichment_disease=DOID:1799!3.78e-07!1;DOID:10165!3.78e-07!1;DOID:1798!3.78e-07!1;DOID:178!6.76e-07!1;DOID:326!6.76e-07!1;DOID:3978!6.76e-07!1;DOID:3394!6.76e-07!1;DOID:5844!6.76e-07!1;DOID:4960!9.51e-07!1;DOID:0070004!9.51e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:1799;1.72e-14;1!DOID:10165;1.72e-14;1!DOID:1798;1.72e-14;1 | |ontology_enrichment_disease_v019=DOID:1799;1.72e-14;1!DOID:10165;1.72e-14;1!DOID:1798;1.72e-14;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,1.84e-14,1;DOID:10165,1.84e-14,1;DOID:1798,1.84e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!5.47e-18!3;UBERON:0000920!5.47e-18!3;UBERON:0005631!2.64e-14!14;UBERON:0000158!2.64e-14!14;UBERON:0003124!1.37e-13!7;UBERON:0000478!4.26e-08!24;UBERON:0002146!8.02e-07!1;UBERON:0005623!8.02e-07!1;UBERON:0001242!9.53e-07!4;UBERON:0001262!9.53e-07!4;UBERON:0004786!9.53e-07!4;UBERON:0004808!9.53e-07!4;UBERON:0001277!9.53e-07!4 | |ontology_enrichment_uberon=UBERON:0000476!5.47e-18!3;UBERON:0000920!5.47e-18!3;UBERON:0005631!2.64e-14!14;UBERON:0000158!2.64e-14!14;UBERON:0003124!1.37e-13!7;UBERON:0000478!4.26e-08!24;UBERON:0002146!8.02e-07!1;UBERON:0005623!8.02e-07!1;UBERON:0001242!9.53e-07!4;UBERON:0001262!9.53e-07!4;UBERON:0004786!9.53e-07!4;UBERON:0004808!9.53e-07!4;UBERON:0001277!9.53e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.78e-39;3!UBERON:0000920;1.78e-39;3!UBERON:0001242;3.73e-14;4!UBERON:0001262;3.73e-14;4!UBERON:0004786;3.73e-14;4!UBERON:0004808;3.73e-14;4!UBERON:0001277;3.73e-14;4!UBERON:0005631;2.44e-12;10!UBERON:0000158;2.44e-12;10!UBERON:0000478;4.53e-09;24!UBERON:0000485;1.75e-08;7!UBERON:0003929;1.75e-08;7!UBERON:0003350;1.57e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0003124;1.78e-39;3!UBERON:0000920;1.78e-39;3!UBERON:0001242;3.73e-14;4!UBERON:0001262;3.73e-14;4!UBERON:0004786;3.73e-14;4!UBERON:0004808;3.73e-14;4!UBERON:0001277;3.73e-14;4!UBERON:0005631;2.44e-12;10!UBERON:0000158;2.44e-12;10!UBERON:0000478;4.53e-09;24!UBERON:0000485;1.75e-08;7!UBERON:0003929;1.75e-08;7!UBERON:0003350;1.57e-07;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.46e-39,3;UBERON:0003124,2.25e-30,7;UBERON:0005631,2.22e-15,14;UBERON:0000158,2.22e-15,14;UBERON:0001242,3.85e-14,4;UBERON:0001262,3.85e-14,4;UBERON:0004786,3.85e-14,4;UBERON:0004808,3.85e-14,4;UBERON:0001277,3.85e-14,4;UBERON:0000478,4.39e-09,24;UBERON:0003350,1.60e-07,8;UBERON:0004923,6.85e-07,66;UBERON:0000485,8.84e-07,9 | |||
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|short_description=p2@STS | |short_description=p2@STS | ||
}} | }} |
Revision as of 23:01, 18 November 2012
Short description: | p2@STS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_STS_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000217961_5end |
EntrezGene: | STS |
HGNC: | 11425 |
UniProt: | P08842 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.46e-39 | 3 |
germ line cell | 6.60e-18 | 7 |
germ cell | 6.60e-18 | 7 |
intestinal epithelial cell | 3.85e-14 | 4 |
epithelial cell of large intestine | 5.37e-08 | 2 |
extraembryonic cell | 9.17e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.46e-39 | 3 |
chorion | 2.25e-30 | 7 |
extraembryonic membrane | 2.22e-15 | 14 |
membranous layer | 2.22e-15 | 14 |
intestinal mucosa | 3.85e-14 | 4 |
wall of intestine | 3.85e-14 | 4 |
gastrointestinal system mucosa | 3.85e-14 | 4 |
gastrointestinal system epithelium | 3.85e-14 | 4 |
intestinal epithelium | 3.85e-14 | 4 |
extraembryonic structure | 4.39e-09 | 24 |
epithelium of mucosa | 1.60e-07 | 8 |
organ component layer | 6.85e-07 | 66 |
simple columnar epithelium | 8.84e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.84e-14 | 1 |
endocrine pancreas cancer | 1.84e-14 | 1 |
pancreatic endocrine carcinoma | 1.84e-14 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.