FFCP PHASE1:Hg19::chr10:63999878..63999893,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000791!3.00e-29!18;CL:0000789!3.00e-29!18;CL:0002420!3.00e-29!18;CL:0002419!3.00e-29!18;CL:0000790!3.00e-29!18;CL:0000084!2.47e-24!25;CL:0000827!2.47e-24!25;CL:0000625!2.92e-20!11;CL:0000838!1.34e-16!52;CL:0000542!3.83e-16!53;CL:0000051!3.83e-16!53;CL:0000624!1.17e-12!6;CL:0000738!5.17e-10!140;CL:0002087!1.72e-09!119;CL:0000898!3.05e-07!3;CL:0000037!6.99e-07!172;CL:0000566!6.99e-07!172 | |ontology_enrichment_celltype=CL:0000791!3.00e-29!18;CL:0000789!3.00e-29!18;CL:0002420!3.00e-29!18;CL:0002419!3.00e-29!18;CL:0000790!3.00e-29!18;CL:0000084!2.47e-24!25;CL:0000827!2.47e-24!25;CL:0000625!2.92e-20!11;CL:0000838!1.34e-16!52;CL:0000542!3.83e-16!53;CL:0000051!3.83e-16!53;CL:0000624!1.17e-12!6;CL:0000738!5.17e-10!140;CL:0002087!1.72e-09!119;CL:0000898!3.05e-07!3;CL:0000037!6.99e-07!172;CL:0000566!6.99e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.79e-52;18!CL:0000789;3.79e-52;18!CL:0002419;3.79e-52;18!CL:0000084;1.07e-36;25!CL:0000624;3.32e-30;6!CL:0000625;3.21e-28;11!CL:0000898;3.16e-16;3!CL:0000815;7.35e-12;2!CL:0000792;7.35e-12;2!CL:0002677;7.35e-12;2!CL:0000542;1.52e-08;53 | |ontology_enrichment_celltype_v019=CL:0000791;3.79e-52;18!CL:0000789;3.79e-52;18!CL:0002419;3.79e-52;18!CL:0000084;1.07e-36;25!CL:0000624;3.32e-30;6!CL:0000625;3.21e-28;11!CL:0000898;3.16e-16;3!CL:0000815;7.35e-12;2!CL:0000792;7.35e-12;2!CL:0002677;7.35e-12;2!CL:0000542;1.52e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.77e-52,18;CL:0000789,2.77e-52,18;CL:0002420,2.77e-52,18;CL:0002419,2.77e-52,18;CL:0000790,2.77e-52,18;CL:0000084,8.55e-37,25;CL:0000827,8.55e-37,25;CL:0000624,2.45e-30,6;CL:0000625,2.99e-28,11;CL:0000898,2.78e-16,3;CL:0000838,4.10e-16,52;CL:0000542,9.40e-16,53;CL:0000051,9.40e-16,53;CL:0000815,7.35e-12,2;CL:0000792,7.35e-12,2;CL:0002677,7.35e-12,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.79e-52;18!CL:0000051;1.52e-08;53 | |ontology_enrichment_development_v019=CL:0000790;3.79e-52;18!CL:0000051;1.52e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.23e-14!15;UBERON:0000179!3.23e-14!15;UBERON:0000463!3.23e-14!15;UBERON:0007023!4.75e-07!115;UBERON:0004177!5.52e-07!7 | |ontology_enrichment_uberon=UBERON:0000178!3.23e-14!15;UBERON:0000179!3.23e-14!15;UBERON:0000463!3.23e-14!15;UBERON:0007023!4.75e-07!115;UBERON:0004177!5.52e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.85e-20;15!UBERON:0000179;2.85e-20;15!UBERON:0000463;2.85e-20;15!UBERON:0002390;9.30e-15;32!UBERON:0002370;1.66e-10;2!UBERON:0005058;1.66e-10;2!UBERON:0009113;1.66e-10;2!UBERON:0002193;3.64e-10;42!UBERON:0004177;3.80e-09;5!UBERON:0005057;3.80e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0000178;2.85e-20;15!UBERON:0000179;2.85e-20;15!UBERON:0000463;2.85e-20;15!UBERON:0002390;9.30e-15;32!UBERON:0002370;1.66e-10;2!UBERON:0005058;1.66e-10;2!UBERON:0009113;1.66e-10;2!UBERON:0002193;3.64e-10;42!UBERON:0004177;3.80e-09;5!UBERON:0005057;3.80e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.25e-20,15;UBERON:0000179,3.25e-20,15;UBERON:0000463,3.25e-20,15;UBERON:0002370,2.39e-11,4;UBERON:0005058,2.39e-11,4;UBERON:0009113,2.39e-11,4;UBERON:0003295,2.39e-11,4;UBERON:0005562,2.39e-11,4;UBERON:0004177,4.16e-11,7;UBERON:0005057,4.16e-11,7;UBERON:0003351,1.00e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,5.70458333330116,1.57204305099666,3.90642848099067,54.5027974973611,19.2294137313818,36.9289288473092,21.4309401248702,24.1760691440827,94.2738903919479,72.8846513180114,126.736208242027,6.14838334683241,11.1851038901495,1.15106533222573,0.829050053357545,1.73881851441031,0.296573126324121,0.535081656179426,0,2.03956816855619,1.91610246800961,3.4362744548263,2.02415753615602,2.54852331459277,3.25541726928209,1.90090408889675,3.76437797694432,3.83959833463255,7.49584359314075,4.02521328474829,2.46338399076314,0.80642697289893,0.267440195783507,0.289648807765598,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.515281080091258,0,0.168776332241266,0,0,0.276149695926898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,2.6487785964879,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.862510299438069,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,3.51505644408909,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9554993798559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,2.02979043692868,4.58782324285425,1.13929437434833,3.33524485640905,2.05681136543097,3.8908398671563,3.7802200606668,0.79312517629427,0,0,0,0,0,0.0711418433484141,0.797131363644112,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.854299300541557,0.314408610199332,0.414239055347196,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398594520940089,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,1.2217909337381,0.837952543656503,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,1.0334225573761,1.98639085746745,0,0.0636471582781649,0,0,0,0.740872583160463,0.430333232356058,0,0,0,0,0,0,0,0,0,0.201273793591026,0 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| ||
|short_description=p@chr10:63999878..63999893,- | |short_description=p@chr10:63999878..63999893,- | ||
}} | }} |
Revision as of 21:36, 18 November 2012
Short description: | p@chr10:63999878..63999893, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:63999878..63999893, - |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.77e-52 | 18 |
alpha-beta T cell | 2.77e-52 | 18 |
immature T cell | 2.77e-52 | 18 |
mature T cell | 2.77e-52 | 18 |
immature alpha-beta T cell | 2.77e-52 | 18 |
T cell | 8.55e-37 | 25 |
pro-T cell | 8.55e-37 | 25 |
CD4-positive, alpha-beta T cell | 2.45e-30 | 6 |
CD8-positive, alpha-beta T cell | 2.99e-28 | 11 |
naive T cell | 2.78e-16 | 3 |
lymphoid lineage restricted progenitor cell | 4.10e-16 | 52 |
lymphocyte | 9.40e-16 | 53 |
common lymphoid progenitor | 9.40e-16 | 53 |
regulatory T cell | 7.35e-12 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.35e-12 | 2 |
naive regulatory T cell | 7.35e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.25e-20 | 15 |
haemolymphatic fluid | 3.25e-20 | 15 |
organism substance | 3.25e-20 | 15 |
thymus | 2.39e-11 | 4 |
hemolymphoid system gland | 2.39e-11 | 4 |
thymic region | 2.39e-11 | 4 |
pharyngeal gland | 2.39e-11 | 4 |
thymus primordium | 2.39e-11 | 4 |
hemopoietic organ | 4.16e-11 | 7 |
immune organ | 4.16e-11 | 7 |
pharyngeal epithelium | 1.00e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.