FFCP PHASE1:Hg19::chr12:15104068..15104114,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.85e-35!254;CL:0000076!3.58e-14!62;CL:0002076!2.40e-07!43;CL:0000220!2.54e-07!246;CL:0002321!3.46e-07!248 | |ontology_enrichment_celltype=CL:0000066!1.85e-35!254;CL:0000076!3.58e-14!62;CL:0002076!2.40e-07!43;CL:0000220!2.54e-07!246;CL:0002321!3.46e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:1000449;4.16e-08;15!CL:0000349;4.41e-08;19!CL:0002251;6.51e-08;20!CL:0002076;1.48e-07;42!CL:1000507;2.44e-07;10!CL:1000494;2.44e-07;10!CL:0000076;4.47e-07;63!CL:1000497;7.90e-07;17!CL:0002518;7.90e-07;17 | |ontology_enrichment_celltype_v019=CL:1000449;4.16e-08;15!CL:0000349;4.41e-08;19!CL:0002251;6.51e-08;20!CL:0002076;1.48e-07;42!CL:1000507;2.44e-07;10!CL:1000494;2.44e-07;10!CL:0000076;4.47e-07;63!CL:1000497;7.90e-07;17!CL:0002518;7.90e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.16e-37,253;CL:0000076,8.89e-12,63;CL:0002076,7.70e-09,42;CL:0000349,4.48e-08,19;CL:1000449,4.56e-08,15;CL:0002251,7.05e-08,20;CL:1000507,2.33e-07,10;CL:1000494,2.33e-07,10;CL:1000497,8.53e-07,17;CL:0002518,8.53e-07,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.58e-13!106;DOID:1749!6.62e-10!14;DOID:0050687!1.60e-08!143 | |ontology_enrichment_disease=DOID:305!1.58e-13!106;DOID:1749!6.62e-10!14;DOID:0050687!1.60e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;3.70e-16;14!DOID:299;1.77e-07;25 | |ontology_enrichment_disease_v019=DOID:1749;3.70e-16;14!DOID:299;1.77e-07;25 | ||
|ontology_enrichment_disease_v019_2=DOID:305,5.15e-19,106;DOID:1749,5.38e-16,14;DOID:0050687,1.82e-13,143;DOID:162,5.26e-08,235;DOID:14566,6.70e-08,239;DOID:299,1.96e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0003914!2.56e-10!118;UBERON:0005631!1.91e-09!14;UBERON:0000158!1.91e-09!14;UBERON:0001048!4.26e-08!168;UBERON:0000478!2.08e-07!24;UBERON:0003124!4.56e-07!7;UBERON:0000477!4.83e-07!286;UBERON:0004535!5.52e-07!110;UBERON:0004872!6.32e-07!84;UBERON:0001009!6.42e-07!113;UBERON:0000064!9.92e-07!219 | |ontology_enrichment_uberon=UBERON:0003914!2.56e-10!118;UBERON:0005631!1.91e-09!14;UBERON:0000158!1.91e-09!14;UBERON:0001048!4.26e-08!168;UBERON:0000478!2.08e-07!24;UBERON:0003124!4.56e-07!7;UBERON:0000477!4.83e-07!286;UBERON:0004535!5.52e-07!110;UBERON:0004872!6.32e-07!84;UBERON:0001009!6.42e-07!113;UBERON:0000064!9.92e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.25e-09;10!UBERON:0000158;1.25e-09;10!UBERON:0001737;7.33e-09;9!UBERON:0001557;7.33e-09;9!UBERON:0006555;4.16e-08;15!UBERON:0004819;4.16e-08;15!UBERON:0001285;4.16e-08;15!UBERON:0007684;4.16e-08;15!UBERON:0004211;2.44e-07;10!UBERON:0009773;2.44e-07;10!UBERON:0001231;2.44e-07;10!UBERON:0004810;2.44e-07;10!UBERON:0000344;4.73e-07;20!UBERON:0000478;5.58e-07;24!UBERON:0001987;6.12e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0005631;1.25e-09;10!UBERON:0000158;1.25e-09;10!UBERON:0001737;7.33e-09;9!UBERON:0001557;7.33e-09;9!UBERON:0006555;4.16e-08;15!UBERON:0004819;4.16e-08;15!UBERON:0001285;4.16e-08;15!UBERON:0007684;4.16e-08;15!UBERON:0004211;2.44e-07;10!UBERON:0009773;2.44e-07;10!UBERON:0001231;2.44e-07;10!UBERON:0004810;2.44e-07;10!UBERON:0000344;4.73e-07;20!UBERON:0000478;5.58e-07;24!UBERON:0001987;6.12e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,9.71e-15,14;UBERON:0000158,9.71e-15,14;UBERON:0003124,4.25e-11,7;UBERON:0001737,4.71e-09,9;UBERON:0001048,3.91e-08,160;UBERON:0004211,4.56e-08,15;UBERON:0009773,4.56e-08,15;UBERON:0001231,4.56e-08,15;UBERON:0001285,4.56e-08,15;UBERON:0007684,4.56e-08,15;UBERON:0004208,4.56e-08,15;UBERON:0006555,2.17e-07,16;UBERON:0004819,2.17e-07,16;UBERON:0004810,2.33e-07,10;UBERON:0000478,5.65e-07,24;UBERON:0000344,5.81e-07,20;UBERON:0001987,6.24e-07,4;UBERON:0004340,6.24e-07,4;UBERON:0004871,9.60e-07,8 | |||
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| ||
|short_description=p3@ARHGDIB | |short_description=p3@ARHGDIB | ||
}} | }} |
Revision as of 12:09, 18 November 2012
Short description: | p3@ARHGDIB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ARHGDIB_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000545895_5end |
EntrezGene: | ARHGDIB |
HGNC: | 679 |
UniProt: | F5H3P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.16e-37 | 253 |
squamous epithelial cell | 8.89e-12 | 63 |
endo-epithelial cell | 7.70e-09 | 42 |
extraembryonic cell | 4.48e-08 | 19 |
epithelial cell of nephron | 4.56e-08 | 15 |
epithelial cell of alimentary canal | 7.05e-08 | 20 |
kidney tubule cell | 2.33e-07 | 10 |
nephron tubule epithelial cell | 2.33e-07 | 10 |
kidney cell | 8.53e-07 | 17 |
kidney epithelial cell | 8.53e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 9.71e-15 | 14 |
membranous layer | 9.71e-15 | 14 |
chorion | 4.25e-11 | 7 |
larynx | 4.71e-09 | 9 |
primordium | 3.91e-08 | 160 |
nephron epithelium | 4.56e-08 | 15 |
renal tubule | 4.56e-08 | 15 |
nephron tubule | 4.56e-08 | 15 |
nephron | 4.56e-08 | 15 |
uriniferous tubule | 4.56e-08 | 15 |
nephrogenic mesenchyme | 4.56e-08 | 15 |
excretory tube | 2.17e-07 | 16 |
kidney epithelium | 2.17e-07 | 16 |
nephron tubule epithelium | 2.33e-07 | 10 |
extraembryonic structure | 5.65e-07 | 24 |
mucosa | 5.81e-07 | 20 |
placenta | 6.24e-07 | 4 |
allantois | 6.24e-07 | 4 |
somatic layer of lateral plate mesoderm | 9.60e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.15e-19 | 106 |
squamous cell carcinoma | 5.38e-16 | 14 |
cell type cancer | 1.82e-13 | 143 |
cancer | 5.26e-08 | 235 |
disease of cellular proliferation | 6.70e-08 | 239 |
adenocarcinoma | 1.96e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.