FFCP PHASE1:Hg19::chr2:21225230..21225237,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000181!4.43e-40!12;CL:0000417!4.43e-40!12;CL:0000668!4.43e-40!12;CL:0000414!4.43e-40!12;CL:0000412!4.43e-40!12;CL:0000182!4.43e-40!12;CL:0000223!1.24e-10!59;CL:0002195!8.04e-08!2;CL:0002571!8.04e-08!2 | |ontology_enrichment_celltype=CL:0000181!4.43e-40!12;CL:0000417!4.43e-40!12;CL:0000668!4.43e-40!12;CL:0000414!4.43e-40!12;CL:0000412!4.43e-40!12;CL:0000182!4.43e-40!12;CL:0000223!1.24e-10!59;CL:0002195!8.04e-08!2;CL:0002571!8.04e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.59e-74;12 | |ontology_enrichment_celltype_v019=CL:0000182;8.59e-74;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.69e-74,12;CL:0000223,1.57e-15,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.95e-36;11!UBERON:0009497;8.77e-31;13!UBERON:0001041;1.17e-13;30!UBERON:0003104;4.19e-13;31!CL:0000223;2.09e-11;58 | |ontology_enrichment_development_v019=UBERON:0004161;2.95e-36;11!UBERON:0009497;8.77e-31;13!UBERON:0001041;1.17e-13;30!UBERON:0003104;4.19e-13;31!CL:0000223;2.09e-11;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.75e-44!19;UBERON:0006925!2.75e-44!19;UBERON:0008836!2.75e-44!19;UBERON:0005057!1.57e-40!26;UBERON:0008835!3.56e-38!22;UBERON:0003894!3.56e-38!22;UBERON:0009854!1.72e-36!23;UBERON:0007499!1.59e-33!25;UBERON:0009497!1.59e-33!25;UBERON:0000015!1.59e-33!25;UBERON:0002423!1.59e-33!25;UBERON:0006235!1.59e-33!25;UBERON:0004161!1.59e-33!25;UBERON:0009856!3.26e-32!26;UBERON:0002365!6.41e-27!31;UBERON:0002330!6.41e-27!31;UBERON:0002368!9.04e-24!35;UBERON:0003929!3.97e-19!54;UBERON:0005172!9.99e-19!55;UBERON:0005173!9.99e-19!55;UBERON:0000949!2.44e-18!45;UBERON:0002417!8.51e-17!61;UBERON:0000916!8.51e-17!61;UBERON:0002530!8.15e-14!59;UBERON:0004921!2.38e-13!129;UBERON:0004185!2.38e-13!129;UBERON:0005911!2.80e-12!82;UBERON:0001007!6.91e-11!155;UBERON:0001555!6.91e-11!155;UBERON:0007026!6.91e-11!155;UBERON:0001041!4.29e-10!98;UBERON:0004119!7.19e-10!169;UBERON:0000925!7.19e-10!169;UBERON:0006595!7.19e-10!169;UBERON:0005177!3.69e-09!107;UBERON:0009569!1.28e-08!113;UBERON:0002405!2.27e-08!115;UBERON:0000466!1.27e-07!126;UBERON:0000077!2.34e-07!130;UBERON:0000490!6.96e-07!138 | |ontology_enrichment_uberon=UBERON:0002107!2.75e-44!19;UBERON:0006925!2.75e-44!19;UBERON:0008836!2.75e-44!19;UBERON:0005057!1.57e-40!26;UBERON:0008835!3.56e-38!22;UBERON:0003894!3.56e-38!22;UBERON:0009854!1.72e-36!23;UBERON:0007499!1.59e-33!25;UBERON:0009497!1.59e-33!25;UBERON:0000015!1.59e-33!25;UBERON:0002423!1.59e-33!25;UBERON:0006235!1.59e-33!25;UBERON:0004161!1.59e-33!25;UBERON:0009856!3.26e-32!26;UBERON:0002365!6.41e-27!31;UBERON:0002330!6.41e-27!31;UBERON:0002368!9.04e-24!35;UBERON:0003929!3.97e-19!54;UBERON:0005172!9.99e-19!55;UBERON:0005173!9.99e-19!55;UBERON:0000949!2.44e-18!45;UBERON:0002417!8.51e-17!61;UBERON:0000916!8.51e-17!61;UBERON:0002530!8.15e-14!59;UBERON:0004921!2.38e-13!129;UBERON:0004185!2.38e-13!129;UBERON:0005911!2.80e-12!82;UBERON:0001007!6.91e-11!155;UBERON:0001555!6.91e-11!155;UBERON:0007026!6.91e-11!155;UBERON:0001041!4.29e-10!98;UBERON:0004119!7.19e-10!169;UBERON:0000925!7.19e-10!169;UBERON:0006595!7.19e-10!169;UBERON:0005177!3.69e-09!107;UBERON:0009569!1.28e-08!113;UBERON:0002405!2.27e-08!115;UBERON:0000466!1.27e-07!126;UBERON:0000077!2.34e-07!130;UBERON:0000490!6.96e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.26e-63;19!UBERON:0006925;2.26e-63;19!UBERON:0002423;2.97e-48;25!UBERON:0002365;3.65e-38;31!UBERON:0002330;3.65e-38;31!UBERON:0002368;3.52e-32;33!UBERON:0000949;6.51e-26;43!UBERON:0005172;8.14e-15;52!UBERON:0005173;8.14e-15;52!UBERON:0002530;1.80e-13;57!UBERON:0002417;1.71e-12;58!UBERON:0000916;1.71e-12;58!UBERON:0001007;1.41e-09;81 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.26e-63;19!UBERON:0006925;2.26e-63;19!UBERON:0002423;2.97e-48;25!UBERON:0002365;3.65e-38;31!UBERON:0002330;3.65e-38;31!UBERON:0002368;3.52e-32;33!UBERON:0000949;6.51e-26;43!UBERON:0005172;8.14e-15;52!UBERON:0005173;8.14e-15;52!UBERON:0002530;1.80e-13;57!UBERON:0002417;1.71e-12;58!UBERON:0000916;1.71e-12;58!UBERON:0001007;1.41e-09;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.79e-63,19;UBERON:0006925,1.79e-63,19;UBERON:0008836,1.79e-63,19;UBERON:0008835,7.16e-55,22;UBERON:0003894,7.16e-55,22;UBERON:0009854,1.68e-52,23;UBERON:0007499,2.49e-48,25;UBERON:0009497,2.49e-48,25;UBERON:0000015,2.49e-48,25;UBERON:0002423,2.49e-48,25;UBERON:0006235,2.49e-48,25;UBERON:0004161,2.49e-48,25;UBERON:0009856,1.75e-46,26;UBERON:0002365,4.89e-39,31;UBERON:0002330,4.89e-39,31;UBERON:0002368,1.31e-34,35;UBERON:0000949,5.70e-27,45;UBERON:0003929,1.66e-22,54;UBERON:0005172,1.66e-22,54;UBERON:0005173,1.66e-22,54;UBERON:0002530,1.30e-20,59;UBERON:0002417,2.85e-20,60;UBERON:0000916,2.85e-20,60;UBERON:0005911,7.37e-15,82;UBERON:0001041,5.23e-14,87;UBERON:0005177,4.53e-12,101;UBERON:0009569,6.96e-11,112;UBERON:0003914,2.04e-10,117;UBERON:0004921,3.05e-10,118;UBERON:0005256,5.46e-10,122;UBERON:0001007,2.46e-08,145;UBERON:0001555,2.46e-08,145;UBERON:0007026,2.46e-08,145;UBERON:0000490,3.20e-08,148;UBERON:0000025,3.49e-08,192;UBERON:0001048,1.35e-07,160;UBERON:0003104,1.35e-07,160;UBERON:0009142,1.35e-07,160;UBERON:0004119,1.51e-07,160;UBERON:0000925,1.51e-07,160;UBERON:0006595,1.51e-07,160;UBERON:0011216,6.23e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,1.96565443335525,1.77236972004421,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75741138075283,1.56590130924216,1.61768505250044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75862680413699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,1.96565443335525,1.77236972004421,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75741138075283,1.56590130924216,1.61768505250044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75862680413699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p60@APOB | |short_description=p60@APOB | ||
}} | }} |
Revision as of 10:13, 18 November 2012
Short description: | p60@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_60_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 403bp_to_M36676_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.69e-74 | 12 |
endodermal cell | 1.57e-15 | 58 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.