FFCP PHASE1:Hg19::chr17:17740287..17740307,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.22e-23!254;CL:0000223!6.71e-10!59;CL:0000548!4.54e-08!679;CL:0000004!4.54e-08!679;CL:0000255!4.54e-08!679;CL:0000012!9.29e-08!682;CL:0002076!3.87e-07!43 | |ontology_enrichment_celltype=CL:0000066!1.22e-23!254;CL:0000223!6.71e-10!59;CL:0000548!4.54e-08!679;CL:0000004!4.54e-08!679;CL:0000255!4.54e-08!679;CL:0000012!9.29e-08!682;CL:0002076!3.87e-07!43 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.28e-23,253;CL:0000223,1.37e-09,58;CL:0002076,7.70e-07,42 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.09e-12!106;DOID:0050687!1.13e-12!143;DOID:162!1.08e-08!235;DOID:14566!1.92e-08!239 | |ontology_enrichment_disease=DOID:305!1.09e-12!106;DOID:0050687!1.13e-12!143;DOID:162!1.08e-08!235;DOID:14566!1.92e-08!239 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.09e-12,106;DOID:0050687,1.13e-12,143;DOID:162,1.08e-08,235;DOID:14566,1.92e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.13e-16!169;UBERON:0000925!4.13e-16!169;UBERON:0006595!4.13e-16!169;UBERON:0001007!4.94e-13!155;UBERON:0001555!4.94e-13!155;UBERON:0007026!4.94e-13!155;UBERON:0005177!3.11e-12!107;UBERON:0000077!1.68e-10!130;UBERON:0003104!1.94e-10!238;UBERON:0009142!1.94e-10!238;UBERON:0000466!7.05e-10!126;UBERON:0001048!7.35e-10!168;UBERON:0001041!1.84e-09!98;UBERON:0004921!5.06e-09!129;UBERON:0004185!5.06e-09!129;UBERON:0005911!5.96e-09!82;UBERON:0002100!6.70e-08!216;UBERON:0001004!1.51e-07!72;UBERON:0009569!1.58e-07!113;UBERON:0005172!1.99e-07!55;UBERON:0005173!1.99e-07!55;UBERON:0000481!8.59e-07!347 | |ontology_enrichment_uberon=UBERON:0004119!4.13e-16!169;UBERON:0000925!4.13e-16!169;UBERON:0006595!4.13e-16!169;UBERON:0001007!4.94e-13!155;UBERON:0001555!4.94e-13!155;UBERON:0007026!4.94e-13!155;UBERON:0005177!3.11e-12!107;UBERON:0000077!1.68e-10!130;UBERON:0003104!1.94e-10!238;UBERON:0009142!1.94e-10!238;UBERON:0000466!7.05e-10!126;UBERON:0001048!7.35e-10!168;UBERON:0001041!1.84e-09!98;UBERON:0004921!5.06e-09!129;UBERON:0004185!5.06e-09!129;UBERON:0005911!5.96e-09!82;UBERON:0002100!6.70e-08!216;UBERON:0001004!1.51e-07!72;UBERON:0009569!1.58e-07!113;UBERON:0005172!1.99e-07!55;UBERON:0005173!1.99e-07!55;UBERON:0000481!8.59e-07!347 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.76e-14,160;UBERON:0000925,9.76e-14,160;UBERON:0006595,9.76e-14,160;UBERON:0005177,1.59e-12,101;UBERON:0001007,1.23e-10,145;UBERON:0001555,1.23e-10,145;UBERON:0007026,1.23e-10,145;UBERON:0005911,5.96e-09,82;UBERON:0001048,1.58e-08,160;UBERON:0002100,3.75e-08,199;UBERON:0001041,1.23e-07,87;UBERON:0004921,2.54e-07,118;UBERON:0009569,2.71e-07,112;UBERON:0001004,3.12e-07,74;UBERON:0005172,3.28e-07,54;UBERON:0005173,3.28e-07,54 | |||
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304972 | ||
|short_description=p1@SREBF1 | |short_description=p1@SREBF1 | ||
}} | }} |
Revision as of 06:24, 18 November 2012
Short description: | p1@SREBF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SREBF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355815_5end |
EntrezGene: | SREBF1 |
HGNC: | 11289 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.28e-23 | 253 |
endodermal cell | 1.37e-09 | 58 |
endo-epithelial cell | 7.70e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.76e-14 | 160 |
endoderm | 9.76e-14 | 160 |
presumptive endoderm | 9.76e-14 | 160 |
trunk region element | 1.59e-12 | 101 |
digestive system | 1.23e-10 | 145 |
digestive tract | 1.23e-10 | 145 |
primitive gut | 1.23e-10 | 145 |
endo-epithelium | 5.96e-09 | 82 |
primordium | 1.58e-08 | 160 |
trunk | 3.75e-08 | 199 |
foregut | 1.23e-07 | 87 |
subdivision of digestive tract | 2.54e-07 | 118 |
subdivision of trunk | 2.71e-07 | 112 |
respiratory system | 3.12e-07 | 74 |
abdomen element | 3.28e-07 | 54 |
abdominal segment element | 3.28e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.09e-12 | 106 |
cell type cancer | 1.13e-12 | 143 |
cancer | 1.08e-08 | 235 |
disease of cellular proliferation | 1.92e-08 | 239 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.