FFCP PHASE1:Hg19::chr2:177016535..177016548,+: Difference between revisions
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|ontology_enrichment_celltype=CL:1000507!7.02e-24!12;CL:1000494!7.02e-24!12;CL:1000449!1.57e-20!16;CL:1000497!6.58e-18!18;CL:0002518!6.58e-18!18;CL:0002681!2.16e-14!13;CL:0002584!2.16e-14!13;CL:0000239!8.09e-09!3;CL:1000615!8.09e-09!3;CL:0002306!8.09e-09!3;CL:0000650!3.39e-08!3;CL:1000618!3.39e-08!3;CL:1001318!3.39e-08!3;CL:0002173!3.39e-08!3;CL:1000500!3.39e-08!3;CL:0002620!5.00e-08!23 | |ontology_enrichment_celltype=CL:1000507!7.02e-24!12;CL:1000494!7.02e-24!12;CL:1000449!1.57e-20!16;CL:1000497!6.58e-18!18;CL:0002518!6.58e-18!18;CL:0002681!2.16e-14!13;CL:0002584!2.16e-14!13;CL:0000239!8.09e-09!3;CL:1000615!8.09e-09!3;CL:0002306!8.09e-09!3;CL:0000650!3.39e-08!3;CL:1000618!3.39e-08!3;CL:1001318!3.39e-08!3;CL:0002173!3.39e-08!3;CL:1000500!3.39e-08!3;CL:0002620!5.00e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.75e-15;10!CL:1000494;1.75e-15;10!CL:0000239;7.18e-14;3!CL:1000615;7.18e-14;3!CL:0002306;7.18e-14;3!CL:0000319;2.93e-11;1!CL:1001319;9.49e-11;1!CL:1000600;9.49e-11;1!CL:1000449;2.14e-10;15!CL:1000497;3.41e-09;17!CL:0002518;3.41e-09;17!CL:0002681;9.63e-08;12!CL:0002584;9.63e-08;12 | |ontology_enrichment_celltype_v019=CL:1000507;1.75e-15;10!CL:1000494;1.75e-15;10!CL:0000239;7.18e-14;3!CL:1000615;7.18e-14;3!CL:0002306;7.18e-14;3!CL:0000319;2.93e-11;1!CL:1001319;9.49e-11;1!CL:1000600;9.49e-11;1!CL:1000449;2.14e-10;15!CL:1000497;3.41e-09;17!CL:0002518;3.41e-09;17!CL:0002681;9.63e-08;12!CL:0002584;9.63e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.78e-15,10;CL:1000494,1.78e-15,10;CL:0000239,6.52e-14,3;CL:1000615,6.52e-14,3;CL:0002306,6.52e-14,3;CL:0000319,2.79e-11,1;CL:1001319,1.33e-10,1;CL:1000600,1.33e-10,1;CL:1000449,2.17e-10,15;CL:1000497,3.45e-09,17;CL:0002518,3.45e-09,17;CL:0002681,1.08e-07,12;CL:0002584,1.08e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;2.93e-11;1 | |ontology_enrichment_disease_v019=DOID:3030;2.93e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3030,2.79e-11,1;DOID:0050687,1.13e-07,143 | |||
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| ||
|short_description=p3@HOXD4 | |short_description=p3@HOXD4 | ||
}} | }} |
Revision as of 14:05, 17 November 2012
Short description: | p3@HOXD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_HOXD4_5end |
Coexpression cluster: | NA |
Association with transcript: | -475bp_to_ENST00000465649_5end |
EntrezGene: | HOXD4 |
HGNC: | 5138 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.78e-15 | 10 |
nephron tubule epithelial cell | 1.78e-15 | 10 |
brush border epithelial cell | 6.52e-14 | 3 |
kidney cortex tubule cell | 6.52e-14 | 3 |
epithelial cell of proximal tubule | 6.52e-14 | 3 |
mucus secreting cell | 2.79e-11 | 1 |
bladder cell | 1.33e-10 | 1 |
lower urinary tract cell | 1.33e-10 | 1 |
epithelial cell of nephron | 2.17e-10 | 15 |
kidney cell | 3.45e-09 | 17 |
kidney epithelial cell | 3.45e-09 | 17 |
kidney cortical cell | 1.08e-07 | 12 |
renal cortical epithelial cell | 1.08e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.78e-15 | 10 |
renal cortex tubule | 6.52e-14 | 3 |
region of nephron tubule | 6.52e-14 | 3 |
proximal tubule | 6.52e-14 | 3 |
vas deferens | 1.10e-10 | 1 |
spermatic cord | 1.10e-10 | 1 |
urinary bladder urothelium | 1.33e-10 | 1 |
wall of urinary bladder | 1.33e-10 | 1 |
mucosa of urinary bladder | 1.33e-10 | 1 |
nephron epithelium | 2.17e-10 | 15 |
renal tubule | 2.17e-10 | 15 |
nephron tubule | 2.17e-10 | 15 |
nephron | 2.17e-10 | 15 |
uriniferous tubule | 2.17e-10 | 15 |
nephrogenic mesenchyme | 2.17e-10 | 15 |
excretory tube | 9.43e-10 | 16 |
kidney epithelium | 9.43e-10 | 16 |
cortex of kidney | 1.08e-07 | 12 |
renal parenchyma | 1.08e-07 | 12 |
cavitated compound organ | 1.60e-07 | 31 |
transitional epithelium | 2.69e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.79e-11 | 1 |
cell type cancer | 1.13e-07 | 143 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.