FFCP PHASE1:Hg19::chr8:18942243..18942259,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.31e-36!180;CL:0000057!5.17e-25!75;CL:0002620!2.80e-15!23;CL:0000680!3.80e-12!57;CL:0000056!3.80e-12!57;CL:0000355!3.80e-12!57;CL:0000187!1.88e-10!54;CL:0000183!1.24e-09!59;CL:0000393!4.31e-08!60;CL:0000211!4.31e-08!60;CL:0000048!5.66e-07!430 | |ontology_enrichment_celltype=CL:0000055!1.31e-36!180;CL:0000057!5.17e-25!75;CL:0002620!2.80e-15!23;CL:0000680!3.80e-12!57;CL:0000056!3.80e-12!57;CL:0000355!3.80e-12!57;CL:0000187!1.88e-10!54;CL:0000183!1.24e-09!59;CL:0000393!4.31e-08!60;CL:0000211!4.31e-08!60;CL:0000048!5.66e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.54e-24;23!CL:0000057;1.46e-11;73!CL:0000680;2.97e-09;7!CL:0002320;4.35e-09;188!CL:0002556;6.98e-08;6!CL:0002552;9.91e-08;5!CL:0002559;5.59e-07;5!CL:0000499;9.09e-07;28 | |ontology_enrichment_celltype_v019=CL:0002620;2.54e-24;23!CL:0000057;1.46e-11;73!CL:0000680;2.97e-09;7!CL:0002320;4.35e-09;188!CL:0002556;6.98e-08;6!CL:0002552;9.91e-08;5!CL:0002559;5.59e-07;5!CL:0000499;9.09e-07;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.76e-29,76;CL:0002620,2.20e-24,23;CL:0000048,2.33e-13,427;CL:0000723,9.66e-13,433;CL:0000034,5.99e-12,441;CL:0000680,4.13e-09,58;CL:0000056,4.13e-09,58;CL:0000355,4.13e-09,58;CL:0002320,8.24e-09,361;CL:0002556,9.12e-08,6;CL:0002552,1.26e-07,5;CL:0000134,3.40e-07,354;CL:0000219,3.78e-07,386;CL:0000187,3.81e-07,55;CL:0002559,5.10e-07,5;CL:0000499,8.78e-07,28 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;3.49e-08;5!DOID:450;3.49e-08;5!DOID:66;3.49e-08;5!DOID:423;3.49e-08;5!DOID:0080000;3.49e-08;5!DOID:11722;3.49e-08;5 | |ontology_enrichment_disease_v019=DOID:17;3.49e-08;5!DOID:450;3.49e-08;5!DOID:66;3.49e-08;5!DOID:423;3.49e-08;5!DOID:0080000;3.49e-08;5!DOID:11722;3.49e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,3.44e-08,5;DOID:450,3.44e-08,5;DOID:66,3.44e-08,5;DOID:423,3.44e-08,5;DOID:0080000,3.44e-08,5;DOID:11722,3.44e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!8.37e-20!83;UBERON:0002329!8.37e-20!83;UBERON:0003077!8.37e-20!83;UBERON:0003059!8.37e-20!83;UBERON:0007282!8.37e-20!83;UBERON:0009618!8.37e-20!83;UBERON:0007285!8.37e-20!83;UBERON:0000475!6.95e-17!365;UBERON:0004290!2.80e-16!70;UBERON:0005256!1.57e-13!143;UBERON:0000486!3.61e-13!82;UBERON:0002385!3.51e-12!63;UBERON:0001015!3.51e-12!63;UBERON:0000383!3.51e-12!63;UBERON:0000481!8.92e-12!347;UBERON:0001134!9.07e-12!61;UBERON:0002036!9.07e-12!61;UBERON:0003082!9.07e-12!61;UBERON:0002199!4.46e-11!45;UBERON:0002416!4.46e-11!45;UBERON:0002097!8.75e-11!40;UBERON:0003102!1.35e-10!95;UBERON:0000479!1.06e-08!787;UBERON:0002100!8.50e-08!216;UBERON:0000468!2.50e-07!659;UBERON:0000467!5.86e-07!625;UBERON:0002067!7.33e-07!9;UBERON:0004016!7.33e-07!9;UBERON:0010083!7.33e-07!9;UBERON:0000480!7.55e-07!626 | |ontology_enrichment_uberon=UBERON:0000914!8.37e-20!83;UBERON:0002329!8.37e-20!83;UBERON:0003077!8.37e-20!83;UBERON:0003059!8.37e-20!83;UBERON:0007282!8.37e-20!83;UBERON:0009618!8.37e-20!83;UBERON:0007285!8.37e-20!83;UBERON:0000475!6.95e-17!365;UBERON:0004290!2.80e-16!70;UBERON:0005256!1.57e-13!143;UBERON:0000486!3.61e-13!82;UBERON:0002385!3.51e-12!63;UBERON:0001015!3.51e-12!63;UBERON:0000383!3.51e-12!63;UBERON:0000481!8.92e-12!347;UBERON:0001134!9.07e-12!61;UBERON:0002036!9.07e-12!61;UBERON:0003082!9.07e-12!61;UBERON:0002199!4.46e-11!45;UBERON:0002416!4.46e-11!45;UBERON:0002097!8.75e-11!40;UBERON:0003102!1.35e-10!95;UBERON:0000479!1.06e-08!787;UBERON:0002100!8.50e-08!216;UBERON:0000468!2.50e-07!659;UBERON:0000467!5.86e-07!625;UBERON:0002067!7.33e-07!9;UBERON:0004016!7.33e-07!9;UBERON:0010083!7.33e-07!9;UBERON:0000480!7.55e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.25e-12;41!UBERON:0002199;5.20e-11;46!UBERON:0002416;5.20e-11;46!UBERON:0002067;3.10e-10;9!UBERON:0000075;1.17e-09;16!UBERON:0001434;1.70e-09;36!UBERON:0003102;1.75e-09;50!UBERON:0002384;2.77e-08;198!UBERON:0001758;6.98e-08;6!UBERON:0003672;6.98e-08;6!UBERON:0004905;1.04e-07;8!UBERON:0000982;1.04e-07;8!UBERON:0004770;1.04e-07;8!UBERON:0002204;1.13e-07;70!UBERON:0011135;4.39e-07;5!UBERON:0002216;4.39e-07;5!UBERON:0011134;4.39e-07;5!UBERON:0002209;4.39e-07;5!UBERON:0002213;4.39e-07;5!UBERON:0007844;4.39e-07;5!UBERON:0011138;4.39e-07;5!UBERON:0001130;4.39e-07;5!UBERON:0001066;4.39e-07;5!UBERON:0001468;4.39e-07;5!UBERON:0002073;5.59e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002097;1.25e-12;41!UBERON:0002199;5.20e-11;46!UBERON:0002416;5.20e-11;46!UBERON:0002067;3.10e-10;9!UBERON:0000075;1.17e-09;16!UBERON:0001434;1.70e-09;36!UBERON:0003102;1.75e-09;50!UBERON:0002384;2.77e-08;198!UBERON:0001758;6.98e-08;6!UBERON:0003672;6.98e-08;6!UBERON:0004905;1.04e-07;8!UBERON:0000982;1.04e-07;8!UBERON:0004770;1.04e-07;8!UBERON:0002204;1.13e-07;70!UBERON:0011135;4.39e-07;5!UBERON:0002216;4.39e-07;5!UBERON:0011134;4.39e-07;5!UBERON:0002209;4.39e-07;5!UBERON:0002213;4.39e-07;5!UBERON:0007844;4.39e-07;5!UBERON:0011138;4.39e-07;5!UBERON:0001130;4.39e-07;5!UBERON:0001066;4.39e-07;5!UBERON:0001468;4.39e-07;5!UBERON:0002073;5.59e-07;5 | ||
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| ||
|short_description=p8@PSD3 | |short_description=p8@PSD3 | ||
}} | }} |
Revision as of 21:49, 15 November 2012
Short description: | p8@PSD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_PSD3_5end |
Coexpression cluster: | C1542_Fibroblast_ductal_liposarcoma_large_normal_mesenchymal_Myoblast |
Association with transcript: | -3bp_to_ENST00000521475_5end |
EntrezGene: | PSD3 |
HGNC: | 19093 |
UniProt: | E5RIH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.76e-29 | 76 |
skin fibroblast | 2.20e-24 | 23 |
multi fate stem cell | 2.33e-13 | 427 |
somatic stem cell | 9.66e-13 | 433 |
stem cell | 5.99e-12 | 441 |
muscle precursor cell | 4.13e-09 | 58 |
myoblast | 4.13e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.13e-09 | 58 |
connective tissue cell | 8.24e-09 | 361 |
fibroblast of periodontium | 9.12e-08 | 6 |
fibroblast of gingiva | 1.26e-07 | 5 |
mesenchymal cell | 3.40e-07 | 354 |
motile cell | 3.78e-07 | 386 |
muscle cell | 3.81e-07 | 55 |
hair follicle cell | 5.10e-07 | 5 |
stromal cell | 8.78e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.44e-08 | 5 |
myotonic disease | 3.44e-08 | 5 |
muscle tissue disease | 3.44e-08 | 5 |
myopathy | 3.44e-08 | 5 |
muscular disease | 3.44e-08 | 5 |
myotonic dystrophy | 3.44e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.