FFCP PHASE1:Mm9::chr17:34655584..34655617,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=217 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:34655584..34655617,- | |||
|description=CAGE_peak_at_chr17:34655584..34655617,- | |description=CAGE_peak_at_chr17:34655584..34655617,- | ||
|id=chr17:34655584..34655617,- | |id=chr17:34655584..34655617,- | ||
|ontology_enrichment_celltype=CL:0002563!2.26e-09!9;CL:0002251!2.26e-09!9;CL:0000239!5.94e-07!6;CL:0000677!5.94e-07!6;CL:0000212!5.94e-07!6;CL:0000584!5.94e-07!6 | |ontology_enrichment_celltype=CL:0002563!2.26e-09!9;CL:0002251!2.26e-09!9;CL:0000239!5.94e-07!6;CL:0000677!5.94e-07!6;CL:0000212!5.94e-07!6;CL:0000584!5.94e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.91e-11,9;CL:0002251,1.91e-11,9;CL:0000239,2.17e-08,6;CL:0000677,2.17e-08,6;CL:0000584,2.17e-08,6;CL:0000075,4.98e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.06e-21!59;UBERON:0000160!4.47e-18!43;UBERON:0000344!3.92e-15!15;UBERON:0001242!2.75e-13!13;UBERON:0000060!2.75e-13!13;UBERON:0001262!2.75e-13!13;UBERON:0004786!2.75e-13!13;UBERON:0004923!8.28e-12!24;UBERON:0003350!2.26e-09!9;UBERON:0004808!2.26e-09!9;UBERON:0001277!2.26e-09!9;UBERON:0000485!3.58e-07!11;UBERON:0001007!8.11e-07!128;UBERON:0001555!8.11e-07!128;UBERON:0007026!8.11e-07!128 | |ontology_enrichment_uberon=UBERON:0005409!4.06e-21!59;UBERON:0000160!4.47e-18!43;UBERON:0000344!3.92e-15!15;UBERON:0001242!2.75e-13!13;UBERON:0000060!2.75e-13!13;UBERON:0001262!2.75e-13!13;UBERON:0004786!2.75e-13!13;UBERON:0004923!8.28e-12!24;UBERON:0003350!2.26e-09!9;UBERON:0004808!2.26e-09!9;UBERON:0001277!2.26e-09!9;UBERON:0000485!3.58e-07!11;UBERON:0001007!8.11e-07!128;UBERON:0001555!8.11e-07!128;UBERON:0007026!8.11e-07!128 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.44e-35,31;UBERON:0005409,2.03e-27,47;UBERON:0000344,9.73e-19,15;UBERON:0001242,2.12e-16,13;UBERON:0001262,2.12e-16,13;UBERON:0004786,2.12e-16,13;UBERON:0003350,1.91e-11,9;UBERON:0004808,1.91e-11,9;UBERON:0001277,1.91e-11,9;UBERON:0004923,2.76e-11,24;UBERON:0000485,6.02e-09,11 | |||
|phase1_expression=0,24.0793031271159,20.4749657725291,106.467402380004,134.240055625621,3.3575854382378,11.2134067485852,0,0,0,0,0,0,0,1.66554880907831,1.21485160433896,0,0.157731082679119,0.548457734422955,0.42438965179803,0,0,0,20.3190376947626,22.4821095445827,16.6527269593356,13.7843838770904,10.7735616342945,81.1400001078717,24.9509828462331,11.3082560434205,0,0,0,6.64358725427932,10.805251948302,8.5751129630195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,4.79572294820052,0,0,0,0,0.230615497256059,0,0,0.376999773989026,0,0,1.76922110389975,0,0,0.484875253135222,80.1484573237925,0,0,197.468303676241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,316.541194098478,115.035996498642,0,0,2.19074684247559,18.1515172161008,29.3539017875229,63.9158103738199,167.983287786757,115.948064125704,136.726353587347,133.698749211653,138.619465941694,190.549714634695,174.639544298753,205.314652725253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,15.7641258832615,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,173.431097794761,0,1.70870880797853,0,0,0.753473828018764,0.410082683163076,0.686334519619568,0,0,0,0.954670618015114,0,0,1.51207477150522,1.04544148007234,4.36725127492355,0.404593039154462,0.991841468704031,0,88.9158716781699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0.15241361331,0.201652370273681,0.584747284438515,0,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.919217542250071,2.22246727801615,3.91466608753899,3.53011130550997,3.28506375292937,1.77435509923168,2.45214243801899,1.96647165686753,3.45735822986294,3.21638626151434,2.38146845641537,1.62238056322798,2.50781986602817,1.64834360321323,1.91358596174717,1.02860775715625,2.8396128985494,1.1921809497366,3.0522747492789,2.4468438907986,2.70766745253365,1.64635175585495,3.15683653725411,2.30866993537965,1.12228454331548,1.18635018124174,3.05363895364247,0.818462086339379,3.09873682371932,2.12197272079256,0,1.63752125911786,4.51229213501426,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,24.0793031271159,20.4749657725291,106.467402380004,134.240055625621,3.3575854382378,11.2134067485852,0,0,0,0,0,0,0,1.66554880907831,1.21485160433896,0,0.157731082679119,0.548457734422955,0.42438965179803,0,0,0,20.3190376947626,22.4821095445827,16.6527269593356,13.7843838770904,10.7735616342945,81.1400001078717,24.9509828462331,11.3082560434205,0,0,0,6.64358725427932,10.805251948302,8.5751129630195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54488862144927,0,0,0,0,0,0,0,0,0,0,4.79572294820052,0,0,0,0,0.230615497256059,0,0,0.376999773989026,0,0,1.76922110389975,0,0,0.484875253135222,80.1484573237925,0,0,197.468303676241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,316.541194098478,115.035996498642,0,0,2.19074684247559,18.1515172161008,29.3539017875229,63.9158103738199,167.983287786757,115.948064125704,136.726353587347,133.698749211653,138.619465941694,190.549714634695,174.639544298753,205.314652725253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,15.7641258832615,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,173.431097794761,0,1.70870880797853,0,0,0.753473828018764,0.410082683163076,0.686334519619568,0,0,0,0.954670618015114,0,0,1.51207477150522,1.04544148007234,4.36725127492355,0.404593039154462,0.991841468704031,0,88.9158716781699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0.198681354781265,0,0,0,0.15241361331,0.201652370273681,0.584747284438515,0,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.919217542250071,2.22246727801615,3.91466608753899,3.53011130550997,3.28506375292937,1.77435509923168,2.45214243801899,1.96647165686753,3.45735822986294,3.21638626151434,2.38146845641537,1.62238056322798,2.50781986602817,1.64834360321323,1.91358596174717,1.02860775715625,2.8396128985494,1.1921809497366,3.0522747492789,2.4468438907986,2.70766745253365,1.64635175585495,3.15683653725411,2.30866993537965,1.12228454331548,1.18635018124174,3.05363895364247,0.818462086339379,3.09873682371932,2.12197272079256,0,1.63752125911786,4.51229213501426,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr17:34655584..34655617,- | |short_description=p@chr17:34655584..34655617,- | ||
}} | }} |
Latest revision as of 17:27, 4 August 2015
Short description: | p@chr17:34655584..34655617, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:34655584..34655617, - |
Coexpression cluster: | MCL_coexpression_mm9:217 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.91e-11 | 9 |
epithelial cell of alimentary canal | 1.91e-11 | 9 |
brush border epithelial cell | 2.17e-08 | 6 |
gut absorptive cell | 2.17e-08 | 6 |
enterocyte | 2.17e-08 | 6 |
columnar/cuboidal epithelial cell | 4.98e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.44e-35 | 31 |
gastrointestinal system | 2.03e-27 | 47 |
mucosa | 9.73e-19 | 15 |
intestinal mucosa | 2.12e-16 | 13 |
wall of intestine | 2.12e-16 | 13 |
gastrointestinal system mucosa | 2.12e-16 | 13 |
epithelium of mucosa | 1.91e-11 | 9 |
gastrointestinal system epithelium | 1.91e-11 | 9 |
intestinal epithelium | 1.91e-11 | 9 |
organ component layer | 2.76e-11 | 24 |
simple columnar epithelium | 6.02e-09 | 11 |