FFCP PHASE1:Mm9::chr17:31570044..31570101,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18585 | |EntrezGene=18585 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z408 | |UniProt=D3Z408 | ||
|association_with_transcript=28bp_to_ENSMUST00000136384_5end | |association_with_transcript=28bp_to_ENSMUST00000136384_5end | ||
|cluster_id=chr17:31570044..31570101,+ | |||
|description=CAGE_peak_2_at_Pde9a_5end | |description=CAGE_peak_2_at_Pde9a_5end | ||
|id=chr17:31570044..31570101,+ | |id=chr17:31570044..31570101,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.45e-07!9;CL:0002251!2.45e-07!9 | |ontology_enrichment_celltype=CL:0002563!2.45e-07!9;CL:0002251!2.45e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.10e-09,9;CL:0002251,4.10e-09,9;CL:0000239,4.14e-07,6;CL:0000677,4.14e-07,6;CL:0000584,4.14e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.42e-16!43;UBERON:0005409!1.00e-13!59;UBERON:0000344!1.71e-11!15;UBERON:0001242!3.31e-10!13;UBERON:0000060!3.31e-10!13;UBERON:0001262!3.31e-10!13;UBERON:0004786!3.31e-10!13;UBERON:0004923!2.01e-07!24;UBERON:0003350!2.45e-07!9;UBERON:0004808!2.45e-07!9;UBERON:0001277!2.45e-07!9;UBERON:0004119!5.63e-07!130;UBERON:0000925!5.63e-07!130;UBERON:0006595!5.63e-07!130 | |ontology_enrichment_uberon=UBERON:0000160!4.42e-16!43;UBERON:0005409!1.00e-13!59;UBERON:0000344!1.71e-11!15;UBERON:0001242!3.31e-10!13;UBERON:0000060!3.31e-10!13;UBERON:0001262!3.31e-10!13;UBERON:0004786!3.31e-10!13;UBERON:0004923!2.01e-07!24;UBERON:0003350!2.45e-07!9;UBERON:0004808!2.45e-07!9;UBERON:0001277!2.45e-07!9;UBERON:0004119!5.63e-07!130;UBERON:0000925!5.63e-07!130;UBERON:0006595!5.63e-07!130 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.94e-27,31;UBERON:0005409,6.03e-19,47;UBERON:0000344,1.54e-14,15;UBERON:0001242,7.39e-13,13;UBERON:0001262,7.39e-13,13;UBERON:0004786,7.39e-13,13;UBERON:0003350,4.10e-09,9;UBERON:0004808,4.10e-09,9;UBERON:0001277,4.10e-09,9;UBERON:0004923,1.10e-08,24;UBERON:0004119,1.66e-08,118;UBERON:0000925,1.66e-08,118;UBERON:0006595,1.66e-08,118;UBERON:0001007,6.52e-08,116;UBERON:0001555,6.52e-08,116;UBERON:0007026,6.52e-08,116;UBERON:0001008,1.94e-07,19;UBERON:0004921,5.13e-07,114;UBERON:0006554,5.52e-07,18;UBERON:0000485,7.43e-07,11 | |||
|phase1_expression=0,90.7336059862339,83.7198600476746,224.730909000975,141.25259584487,47.3419546791529,59.8048359924546,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,40.9580602351121,50.6994511158446,74.6501553349526,94.3368771588374,65.0723122711385,196.294192298434,116.437919949088,72.7276074949399,0,0,0,23.108129580102,9.30914014007557,17.9669033510885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,15.5290076417922,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0.940709657085638,0.125666591329675,0.988779870937496,0.722996784599558,0,0,0.441683036920787,0,26.0948465705371,0,0,50.3250398760925,0,0,0,0.149790639404823,0,0,0,0,0,0,1.73126918545538,0.995255764880744,0.505445516867349,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0,0.646703978798527,0.189106080167819,1.40760899331159,0.43839146485515,0.556094498451196,0,1.23469281844766,0.995171334092466,0,0,0,0,0,0,0,0,0.617068451549513,0.697601834251224,0.804820204198858,0.116765342367169,0.16455984991348,0.492502392237286,0.810688095458557,1.46199987425332,0.878200461164203,1.20785776884335,0,0.102904612379284,50.5540737965211,10.0491215332147,4.69234151177515,7.19933682767359,15.7218302812954,39.7316543507985,45.5874989881984,48.8879859109277,29.4208018157597,53.6918592400275,51.0210473864547,56.1057251156045,38.6028892495858,37.7504151634773,36.743468478698,45.005927755487,3.60369011810855,2.62771579002376,3.38123207019241,2.44381593414377,2.90928730751439,4.34842083319975,4.3000845244495,4.87113488332687,6.90794402502049,5.05928372079382,0,0.166845105716094,0.196558995113203,0,0,0,0.763877555344259,0,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0.252578877947112,0.179397413521912,0,9.05290631816363,0.568474235311454,1.14075483509418,1.01847051465113,1.17345124144251,1.17254380209271,4.52282917683426,7.80534591431195,8.35466263762812,3.98636441367795,3.18909537314974,9.5040722535128,9.84304396635605,13.4523624480806,0,0,0,1.10374698521893,0,0,0,3.02965112645248,0.631016438832513,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0.709700426041343,1.42452482933804,1.95464351224291,5.93892442701128,0,0.485561272309963,0,0.377210159511796,0.590603785761546,0.307435147943927,8.01127708821486,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0,1.87737366450968,4.87213762986786,44.5467364071023,0.65954501176592,0.484393280087717,0.663442174209714,0.716234064018819,1.47726809770555,39.6413937816597,0,0,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0.979660166265606,0.414599921413271,0,0.632671987162271,1.62655573701479,5.18425635944646,3.13632444021703,3.9305261474312,0.134864346384821,0.826534557253359,0.523511883968059,27.9968342310273,0,0,1.79419855252775,1.15820943319968,0.583353565032143,0.129159823477731,0.506868376472335,1.29092962510329,0.651021924219751,0,0,0.288030006257865,0,0,0,0,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0.226730383615211,0,0.62799699626633,0,6.95482538515886,2.81523713176773,6.22715522508701,4.07299920250225,10.0314420807073,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,0.341467211508268,1.21553358534147,0.209613162627982,2.5738091183002,2.66696073361938,4.12070114477788,5.45562656306086,3.28506375292937,4.30914809813408,3.9611531691076,3.46473577638565,3.77748399188729,3.4461281373368,2.85776214769844,4.05595140806994,1.35036454324594,3.29668720642645,2.94397840268795,2.40008476669791,3.90446773550542,2.86123427936785,3.77900683244054,3.19971893412124,2.96151127620868,2.92684756596436,3.41990624869196,5.43216455383447,3.36685362994643,2.72860541685601,1.87158516513571,3.6830793885272,2.78886314134739,1.73615949883027,0,3.27504251823572,6.44613162144895,2.48674831689496,1.10295709559758,1.15933917810211 | |phase1_expression=0,90.7336059862339,83.7198600476746,224.730909000975,141.25259584487,47.3419546791529,59.8048359924546,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67738095830884,0,0,40.9580602351121,50.6994511158446,74.6501553349526,94.3368771588374,65.0723122711385,196.294192298434,116.437919949088,72.7276074949399,0,0,0,23.108129580102,9.30914014007557,17.9669033510885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,3.37066608316204,0,0,0,0,0,0,0,0,0,0,15.5290076417922,0,0.148442139064825,0,0.304465478312141,0.230615497256059,0.301445281105245,0.940709657085638,0.125666591329675,0.988779870937496,0.722996784599558,0,0,0.441683036920787,0,26.0948465705371,0,0,50.3250398760925,0,0,0,0.149790639404823,0,0,0,0,0,0,1.73126918545538,0.995255764880744,0.505445516867349,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0,0.646703978798527,0.189106080167819,1.40760899331159,0.43839146485515,0.556094498451196,0,1.23469281844766,0.995171334092466,0,0,0,0,0,0,0,0,0.617068451549513,0.697601834251224,0.804820204198858,0.116765342367169,0.16455984991348,0.492502392237286,0.810688095458557,1.46199987425332,0.878200461164203,1.20785776884335,0,0.102904612379284,50.5540737965211,10.0491215332147,4.69234151177515,7.19933682767359,15.7218302812954,39.7316543507985,45.5874989881984,48.8879859109277,29.4208018157597,53.6918592400275,51.0210473864547,56.1057251156045,38.6028892495858,37.7504151634773,36.743468478698,45.005927755487,3.60369011810855,2.62771579002376,3.38123207019241,2.44381593414377,2.90928730751439,4.34842083319975,4.3000845244495,4.87113488332687,6.90794402502049,5.05928372079382,0,0.166845105716094,0.196558995113203,0,0,0,0.763877555344259,0,0.162135226775035,0,0,0.372140947668503,0.624075346229121,0.252578877947112,0.179397413521912,0,9.05290631816363,0.568474235311454,1.14075483509418,1.01847051465113,1.17345124144251,1.17254380209271,4.52282917683426,7.80534591431195,8.35466263762812,3.98636441367795,3.18909537314974,9.5040722535128,9.84304396635605,13.4523624480806,0,0,0,1.10374698521893,0,0,0,3.02965112645248,0.631016438832513,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0.709700426041343,1.42452482933804,1.95464351224291,5.93892442701128,0,0.485561272309963,0,0.377210159511796,0.590603785761546,0.307435147943927,8.01127708821486,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0,1.87737366450968,4.87213762986786,44.5467364071023,0.65954501176592,0.484393280087717,0.663442174209714,0.716234064018819,1.47726809770555,39.6413937816597,0,0,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0.979660166265606,0.414599921413271,0,0.632671987162271,1.62655573701479,5.18425635944646,3.13632444021703,3.9305261474312,0.134864346384821,0.826534557253359,0.523511883968059,27.9968342310273,0,0,1.79419855252775,1.15820943319968,0.583353565032143,0.129159823477731,0.506868376472335,1.29092962510329,0.651021924219751,0,0,0.288030006257865,0,0,0,0,0.179026695667481,0.39736270956253,0.120195449519969,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0.226730383615211,0,0.62799699626633,0,6.95482538515886,2.81523713176773,6.22715522508701,4.07299920250225,10.0314420807073,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0,0.341467211508268,1.21553358534147,0.209613162627982,2.5738091183002,2.66696073361938,4.12070114477788,5.45562656306086,3.28506375292937,4.30914809813408,3.9611531691076,3.46473577638565,3.77748399188729,3.4461281373368,2.85776214769844,4.05595140806994,1.35036454324594,3.29668720642645,2.94397840268795,2.40008476669791,3.90446773550542,2.86123427936785,3.77900683244054,3.19971893412124,2.96151127620868,2.92684756596436,3.41990624869196,5.43216455383447,3.36685362994643,2.72860541685601,1.87158516513571,3.6830793885272,2.78886314134739,1.73615949883027,0,3.27504251823572,6.44613162144895,2.48674831689496,1.10295709559758,1.15933917810211 | ||
|short_description=p2@Pde9a | |short_description=p2@Pde9a | ||
}} | }} |
Latest revision as of 05:48, 26 September 2015
Short description: | p2@Pde9a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pde9a_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 28bp_to_ENSMUST00000136384_5end |
EntrezGene: | Pde9a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.10e-09 | 9 |
epithelial cell of alimentary canal | 4.10e-09 | 9 |
brush border epithelial cell | 4.14e-07 | 6 |
gut absorptive cell | 4.14e-07 | 6 |
enterocyte | 4.14e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.94e-27 | 31 |
gastrointestinal system | 6.03e-19 | 47 |
mucosa | 1.54e-14 | 15 |
intestinal mucosa | 7.39e-13 | 13 |
wall of intestine | 7.39e-13 | 13 |
gastrointestinal system mucosa | 7.39e-13 | 13 |
epithelium of mucosa | 4.10e-09 | 9 |
gastrointestinal system epithelium | 4.10e-09 | 9 |
intestinal epithelium | 4.10e-09 | 9 |
organ component layer | 1.10e-08 | 24 |
endoderm-derived structure | 1.66e-08 | 118 |
endoderm | 1.66e-08 | 118 |
presumptive endoderm | 1.66e-08 | 118 |
digestive system | 6.52e-08 | 116 |
digestive tract | 6.52e-08 | 116 |
primitive gut | 6.52e-08 | 116 |
renal system | 1.94e-07 | 19 |
subdivision of digestive tract | 5.13e-07 | 114 |
urinary system structure | 5.52e-07 | 18 |
simple columnar epithelium | 7.43e-07 | 11 |