FFCP PHASE1:Mm9::chr5:8893943..8893954,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18670 | |EntrezGene=18670 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc008wks.1_5end | |association_with_transcript=0bp_to_uc008wks.1_5end | ||
|cluster_id=chr5:8893943..8893954,+ | |||
|description=CAGE_peak_3_at_Abcb4_5end | |description=CAGE_peak_3_at_Abcb4_5end | ||
|id=chr5:8893943..8893954,+ | |id=chr5:8893943..8893954,+ | ||
|ontology_enrichment_celltype=CL:0000414!6.75e-07!11 | |ontology_enrichment_celltype=CL:0000414!6.75e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.74e-13,5;CL:0002027,3.23e-11,3;CL:0002006,3.23e-11,3;CL:0002024,3.23e-11,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.29e-21!22;UBERON:0007499!1.29e-21!22;UBERON:0006925!1.29e-21!22;UBERON:0009497!1.29e-21!22;UBERON:0000015!1.29e-21!22;UBERON:0002423!1.29e-21!22;UBERON:0006235!1.29e-21!22;UBERON:0008835!1.29e-21!22;UBERON:0003894!1.29e-21!22;UBERON:0004161!1.29e-21!22;UBERON:0008836!1.29e-21!22;UBERON:0009854!2.34e-20!23;UBERON:0009856!2.34e-20!23;UBERON:0002365!3.78e-18!25;UBERON:0002330!3.78e-18!25;UBERON:0005172!2.68e-15!49;UBERON:0005173!2.68e-15!49;UBERON:0002417!2.68e-15!49;UBERON:0000916!2.68e-15!49;UBERON:0005057!2.05e-11!51;UBERON:0002405!4.01e-11!70;UBERON:0005256!1.23e-10!47;UBERON:0009569!5.34e-09!66;UBERON:0003914!3.98e-08!47;UBERON:0002368!5.56e-08!60;UBERON:0002530!8.53e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.43e-37,22;UBERON:0007499,3.43e-37,22;UBERON:0006925,3.43e-37,22;UBERON:0009497,3.43e-37,22;UBERON:0000015,3.43e-37,22;UBERON:0002423,3.43e-37,22;UBERON:0006235,3.43e-37,22;UBERON:0008835,3.43e-37,22;UBERON:0003894,3.43e-37,22;UBERON:0004161,3.43e-37,22;UBERON:0008836,3.43e-37,22;UBERON:0009854,1.87e-35,23;UBERON:0009856,1.87e-35,23;UBERON:0002365,2.12e-32,25;UBERON:0002330,2.12e-32,25;UBERON:0005172,2.72e-17,49;UBERON:0005173,2.72e-17,49;UBERON:0002417,2.72e-17,49;UBERON:0000916,2.72e-17,49;UBERON:0005256,9.32e-17,45;UBERON:0003914,6.36e-16,47;UBERON:0003104,2.57e-13,61;UBERON:0009142,2.57e-13,61;UBERON:0003929,3.41e-13,55;UBERON:0009569,4.63e-12,66;UBERON:0002368,7.41e-12,60;UBERON:0002530,1.00e-10,65;UBERON:0000490,1.61e-10,66;UBERON:0005911,6.15e-10,69;UBERON:0005177,1.41e-09,79;UBERON:0001041,2.03e-09,80;UBERON:0000949,2.10e-09,72;UBERON:0002100,4.92e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,1.82227740650843,2.79824751251259,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,17.2084775396277,6.79971333707751,8.63525106620507,16.2444104361917,24.6414787903535,2.94933282276679,0,0,0,0,0,0,0,0,0,0,10.1623652949963,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,1.76922110389975,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,21.0481365231876,0.500535317148282,0.196558995113203,0,0.405720242777006,0.72353147925725,0.50925170356284,2.30156909960649,10.3766545136023,9.06052663520669,4.31304619582064,6.32639611036456,8.7370548472077,10.3557339958316,9.68746033018326,19.2977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,1.13021074202815,0.683471138605126,0,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0.743881101528023,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.128050304809739,0.17230640686684,0,0,0,0,0.294397840268795,0.685738504770831,0.177475806159338,0,0,0.282328141245992,0.0846146078916765,0.548783918618318,0.789209134313529,0.407412341537585,0,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0,0,0,1.07435527024149,0,0.441182838239031,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99865857089398,1.82227740650843,2.79824751251259,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,17.2084775396277,6.79971333707751,8.63525106620507,16.2444104361917,24.6414787903535,2.94933282276679,0,0,0,0,0,0,0,0,0,0,10.1623652949963,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,1.76922110389975,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,21.0481365231876,0.500535317148282,0.196558995113203,0,0.405720242777006,0.72353147925725,0.50925170356284,2.30156909960649,10.3766545136023,9.06052663520669,4.31304619582064,6.32639611036456,8.7370548472077,10.3557339958316,9.68746033018326,19.2977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,1.13021074202815,0.683471138605126,0,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0.743881101528023,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.128050304809739,0.17230640686684,0,0,0,0,0.294397840268795,0.685738504770831,0.177475806159338,0,0,0.282328141245992,0.0846146078916765,0.548783918618318,0.789209134313529,0.407412341537585,0,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0,0,0,1.07435527024149,0,0.441182838239031,0.231867835620421 | ||
|short_description=p3@Abcb4 | |short_description=p3@Abcb4 | ||
}} | }} |
Latest revision as of 07:26, 26 September 2015
Short description: | p3@Abcb4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Abcb4_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_uc008wks.1_5end |
EntrezGene: | Abcb4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.74e-13 | 5 |
CD9-positive, CD41-positive megakaryocyte cell | 3.23e-11 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.23e-11 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.23e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 3.43e-37 | 22 |
epithelial sac | 3.43e-37 | 22 |
digestive gland | 3.43e-37 | 22 |
epithelium of foregut-midgut junction | 3.43e-37 | 22 |
anatomical boundary | 3.43e-37 | 22 |
hepatobiliary system | 3.43e-37 | 22 |
foregut-midgut junction | 3.43e-37 | 22 |
hepatic diverticulum | 3.43e-37 | 22 |
liver primordium | 3.43e-37 | 22 |
septum transversum | 3.43e-37 | 22 |
liver bud | 3.43e-37 | 22 |
digestive tract diverticulum | 1.87e-35 | 23 |
sac | 1.87e-35 | 23 |
exocrine gland | 2.12e-32 | 25 |
exocrine system | 2.12e-32 | 25 |
abdomen element | 2.72e-17 | 49 |
abdominal segment element | 2.72e-17 | 49 |
abdominal segment of trunk | 2.72e-17 | 49 |
abdomen | 2.72e-17 | 49 |
trunk mesenchyme | 9.32e-17 | 45 |
epithelial tube | 6.36e-16 | 47 |
mesenchyme | 2.57e-13 | 61 |
entire embryonic mesenchyme | 2.57e-13 | 61 |
gut epithelium | 3.41e-13 | 55 |
subdivision of trunk | 4.63e-12 | 66 |
endocrine gland | 7.41e-12 | 60 |
gland | 1.00e-10 | 65 |
unilaminar epithelium | 1.61e-10 | 66 |
endo-epithelium | 6.15e-10 | 69 |
trunk region element | 1.41e-09 | 79 |
foregut | 2.03e-09 | 80 |
endocrine system | 2.10e-09 | 72 |
trunk | 4.92e-08 | 90 |