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FFCP PHASE1:Mm9::chr7:51684213..51684237,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=272381
|EntrezGene=272381
|HGNC=
|HGNC=
|MCL_coexpression_id=747
|TSSclassifier=NA
|UniProt=D3YZP3
|UniProt=D3YZP3
|association_with_transcript=-150bp_to_ENSMUST00000127790_5end
|association_with_transcript=-150bp_to_ENSMUST00000127790_5end
|cluster_id=chr7:51684213..51684237,+
|description=CAGE_peak_6_at_Lrrc4b_5end
|description=CAGE_peak_6_at_Lrrc4b_5end
|id=chr7:51684213..51684237,+
|id=chr7:51684213..51684237,+
|ontology_enrichment_celltype=CL:0000117!8.87e-19!23;CL:0000337!8.87e-19!23;CL:0000221!2.59e-16!44;CL:0000133!2.59e-16!44;CL:0002319!4.20e-16!43;CL:0000540!5.06e-14!33;CL:0000047!5.06e-14!33;CL:0000031!5.06e-14!33;CL:0000404!5.06e-14!33;CL:0000055!7.28e-12!50;CL:0000393!3.90e-10!39;CL:0000211!3.90e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-31,23;CL:0000337,1.26e-31,23;CL:0002319,1.93e-26,43;CL:0000221,1.26e-25,44;CL:0000133,1.26e-25,44;CL:0000540,1.52e-21,33;CL:0000047,1.52e-21,33;CL:0000031,1.52e-21,33;CL:0000404,1.52e-21,33;CL:0000393,4.30e-17,39;CL:0000211,4.30e-17,39;CL:0002321,1.01e-12,70;CL:0002453,1.61e-07,8;CL:0002609,2.27e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.16e-37!73;UBERON:0005743!4.16e-37!73;UBERON:0000073!2.38e-35!75;UBERON:0001016!2.38e-35!75;UBERON:0001049!1.92e-31!52;UBERON:0005068!1.92e-31!52;UBERON:0006241!1.92e-31!52;UBERON:0007135!1.92e-31!52;UBERON:0002346!1.95e-31!71;UBERON:0003075!1.95e-31!71;UBERON:0007284!1.95e-31!71;UBERON:0000033!1.11e-30!63;UBERON:0004121!2.91e-30!102;UBERON:0000924!2.91e-30!102;UBERON:0006601!2.91e-30!102;UBERON:0000955!2.47e-29!50;UBERON:0006238!2.47e-29!50;UBERON:0002616!1.64e-28!49;UBERON:0003056!2.22e-25!49;UBERON:0002020!4.72e-25!34;UBERON:0003080!3.05e-23!40;UBERON:0002780!2.38e-22!39;UBERON:0001890!2.38e-22!39;UBERON:0006240!2.38e-22!39;UBERON:0002791!1.84e-20!29;UBERON:0003528!1.84e-20!29;UBERON:0001893!1.84e-20!29;UBERON:0007811!1.92e-17!86;UBERON:0000153!5.62e-16!94;UBERON:0000956!2.27e-14!21;UBERON:0001869!2.27e-14!21;UBERON:0000203!2.27e-14!21;UBERON:0002619!4.79e-12!17;UBERON:0003076!1.72e-08!12;UBERON:0003057!1.72e-08!12;UBERON:0002021!5.67e-08!10;UBERON:0000411!5.67e-08!10;UBERON:0001950!5.67e-08!10;UBERON:0002420!2.77e-07!8;UBERON:0007245!2.77e-07!8;UBERON:0010009!2.77e-07!8;UBERON:0010011!2.77e-07!8;UBERON:0000454!2.77e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.02e-53,73;UBERON:0001016,6.75e-52,75;UBERON:0000073,1.33e-48,54;UBERON:0001049,2.02e-45,52;UBERON:0005068,2.02e-45,52;UBERON:0006241,2.02e-45,52;UBERON:0007135,2.02e-45,52;UBERON:0002020,1.25e-42,34;UBERON:0004121,2.00e-39,95;UBERON:0000924,2.00e-39,95;UBERON:0006601,2.00e-39,95;UBERON:0000955,2.54e-37,47;UBERON:0006238,2.54e-37,47;UBERON:0002346,3.20e-36,64;UBERON:0003075,3.20e-36,64;UBERON:0007284,3.20e-36,64;UBERON:0002616,5.62e-36,46;UBERON:0003528,1.41e-34,29;UBERON:0002791,1.41e-34,29;UBERON:0001893,1.41e-34,29;UBERON:0010371,1.04e-31,73;UBERON:0003080,4.48e-31,40;UBERON:0002780,1.31e-29,39;UBERON:0001890,1.31e-29,39;UBERON:0006240,1.31e-29,39;UBERON:0003056,4.02e-25,49;UBERON:0000956,6.60e-24,21;UBERON:0001869,6.60e-24,21;UBERON:0000203,6.60e-24,21;UBERON:0010314,1.59e-22,92;UBERON:0002619,7.64e-20,17;UBERON:0003076,3.70e-14,12;UBERON:0003057,3.70e-14,12;UBERON:0000025,5.08e-14,114;UBERON:0004111,4.05e-13,122;UBERON:0002021,9.62e-13,10;UBERON:0000411,9.62e-13,10;UBERON:0001950,9.62e-13,10;UBERON:0002420,1.52e-11,8;UBERON:0007245,1.52e-11,8;UBERON:0010009,1.52e-11,8;UBERON:0010011,1.52e-11,8;UBERON:0000454,1.52e-11,8;UBERON:0011216,3.84e-11,194;UBERON:0002240,2.00e-10,6;UBERON:0005174,2.00e-10,6;UBERON:0001137,2.00e-10,6;UBERON:0001948,5.47e-09,5;UBERON:0002315,5.47e-09,5;UBERON:0001954,1.67e-08,7;UBERON:0003022,1.67e-08,7;UBERON:0002421,1.67e-08,7;UBERON:0000349,1.67e-08,7;UBERON:0002600,1.67e-08,7;UBERON:0000369,9.91e-08,5;UBERON:0002435,9.91e-08,5;UBERON:0000204,9.91e-08,5;UBERON:0010082,9.91e-08,5;UBERON:0002950,7.84e-07,4;UBERON:0001891,7.84e-07,4;UBERON:0009616,7.84e-07,4;UBERON:0010286,7.84e-07,4
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14247797122848,3.29529274101708,2.3331587888914,1.1198913730029,2.87505128729943,0,0,0,0,0,0,9.3065571995415,10.0508286061686,7.60597684207415,0,0,0,0,0,6.5912024314049,17.6740420447915,2.48855069540346,2.97013064329719,3.99617426567626,13.9968982357864,9.49734726091938,5.51208596467293,4.60058260887535,1.83843757322004,11.0115880999389,8.17198963745201,7.52672012955593,9.75958529203434,7.22752384459036,5.2091337055676,15.0758819460746,6.75315132038016,3.97275444219706,11.7851434189467,8.96941589034349,8.01517617048792,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,4.68449275218475,1.46612694769419,0,0,0,0,9.13722900369418,5.49000723382352,5.52879149296603,5.04090528557602,4.09144731728529,6.85700547046548,6.65189178577806,0.203678727700633,0,0,0.210441855886474,0.520481771850815,0.459804208866946,0.540186389416048,0.60281927134286,0.0680364991513279,0.12811372028485,1.3118241438362,0.517406741478031,0.431135985865684,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,5.67782861123144,3.91037527041281,0,0,0,0,0.38660238396628,0,0.444756087689741,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,7.22477654945064,6.21221938938677,0,0,0.631016438832513,0,0.430846795465598,0,0,0,0,0,0.395287777946524,6.42642632843614,0,1.24645922567079,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,1.03486947026204,0.214337035031592,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,9.08583979851498,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0.187682475451182,0,0.214368379079066,0,6.7770221114048,7.82552902062201,6.30185064783336,3.43706364687375,5.48066015816514,2.2661816921691,5.40018000185445,3.60256962579376,5.89085131679466,5.69536342927002,0.207574695168353,1.59609949360412,1.70733605754134,0.972426868273176,0.838452650511929,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.758091635291392,0.25347929989024,1.88626341386076,0.468207537349412,0.640251524048693,0.976402972245426,0.476293691283074,0.811190281613988,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0,0.953744759789284,1.16277133305863,0.470546902076653,0.930760686808441,0.548783918618318,0.789209134313529,0.814824683075171,0,0.593175090620871,1.18205378850676,0.409231043169689,0.77468420592983,0.578719832943424,3.74715866906919,0.233931608445408,1.50409737833809,0.57386499620653,0,0.231867835620421
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14247797122848,3.29529274101708,2.3331587888914,1.1198913730029,2.87505128729943,0,0,0,0,0,0,9.3065571995415,10.0508286061686,7.60597684207415,0,0,0,0,0,6.5912024314049,17.6740420447915,2.48855069540346,2.97013064329719,3.99617426567626,13.9968982357864,9.49734726091938,5.51208596467293,4.60058260887535,1.83843757322004,11.0115880999389,8.17198963745201,7.52672012955593,9.75958529203434,7.22752384459036,5.2091337055676,15.0758819460746,6.75315132038016,3.97275444219706,11.7851434189467,8.96941589034349,8.01517617048792,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,4.68449275218475,1.46612694769419,0,0,0,0,9.13722900369418,5.49000723382352,5.52879149296603,5.04090528557602,4.09144731728529,6.85700547046548,6.65189178577806,0.203678727700633,0,0,0.210441855886474,0.520481771850815,0.459804208866946,0.540186389416048,0.60281927134286,0.0680364991513279,0.12811372028485,1.3118241438362,0.517406741478031,0.431135985865684,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,5.67782861123144,3.91037527041281,0,0,0,0,0.38660238396628,0,0.444756087689741,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,7.22477654945064,6.21221938938677,0,0,0.631016438832513,0,0.430846795465598,0,0,0,0,0,0.395287777946524,6.42642632843614,0,1.24645922567079,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,1.03486947026204,0.214337035031592,0.177340233642274,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,9.08583979851498,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0.187682475451182,0,0.214368379079066,0,6.7770221114048,7.82552902062201,6.30185064783336,3.43706364687375,5.48066015816514,2.2661816921691,5.40018000185445,3.60256962579376,5.89085131679466,5.69536342927002,0.207574695168353,1.59609949360412,1.70733605754134,0.972426868273176,0.838452650511929,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.758091635291392,0.25347929989024,1.88626341386076,0.468207537349412,0.640251524048693,0.976402972245426,0.476293691283074,0.811190281613988,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0,0.953744759789284,1.16277133305863,0.470546902076653,0.930760686808441,0.548783918618318,0.789209134313529,0.814824683075171,0,0.593175090620871,1.18205378850676,0.409231043169689,0.77468420592983,0.578719832943424,3.74715866906919,0.233931608445408,1.50409737833809,0.57386499620653,0,0.231867835620421
|short_description=p6@Lrrc4b
|short_description=p6@Lrrc4b
}}
}}

Latest revision as of 19:13, 26 September 2015

Short description:p6@Lrrc4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Lrrc4b_5end
Coexpression cluster:MCL_coexpression_mm9:747
Association with transcript: -150bp_to_ENSMUST00000127790_5end
EntrezGene:Lrrc4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Lrrc4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E817.67
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.51
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.76
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.14
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F15.53
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B26.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.22
medulla oblongata, neonate N30.CNhs11200.1396-42A36.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C99.09
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.78
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.02e-5373
nervous system6.75e-5275
regional part of nervous system1.33e-4854
neural tube2.02e-4552
neural rod2.02e-4552
future spinal cord2.02e-4552
neural keel2.02e-4552
gray matter1.25e-4234
ectoderm-derived structure2.00e-3995
ectoderm2.00e-3995
presumptive ectoderm2.00e-3995
brain2.54e-3747
future brain2.54e-3747
neurectoderm3.20e-3664
neural plate3.20e-3664
presumptive neural plate3.20e-3664
regional part of brain5.62e-3646
brain grey matter1.41e-3429
regional part of telencephalon1.41e-3429
telencephalon1.41e-3429
ecto-epithelium1.04e-3173
anterior neural tube4.48e-3140
regional part of forebrain1.31e-2939
forebrain1.31e-2939
future forebrain1.31e-2939
pre-chordal neural plate4.02e-2549
cerebral cortex6.60e-2421
cerebral hemisphere6.60e-2421
pallium6.60e-2421
structure with developmental contribution from neural crest1.59e-2292
regional part of cerebral cortex7.64e-2017
posterior neural tube3.70e-1412
chordal neural plate3.70e-1412
tube5.08e-14114
anatomical conduit4.05e-13122
occipital lobe9.62e-1310
visual cortex9.62e-1310
neocortex9.62e-1310
basal ganglion1.52e-118
nuclear complex of neuraxis1.52e-118
aggregate regional part of brain1.52e-118
collection of basal ganglia1.52e-118
cerebral subcortex1.52e-118
organ system subdivision3.84e-11194
spinal cord2.00e-106
dorsal region element2.00e-106
dorsum2.00e-106
regional part of spinal cord5.47e-095
gray matter of spinal cord5.47e-095
Ammon's horn1.67e-087
lobe parts of cerebral cortex1.67e-087
hippocampal formation1.67e-087
limbic system1.67e-087
limbic lobe1.67e-087
corpus striatum9.91e-085
striatum9.91e-085
ventral part of telencephalon9.91e-085
future corpus striatum9.91e-085
regional part of midbrain7.84e-074
midbrain7.84e-074
presumptive midbrain7.84e-074
midbrain neural tube7.84e-074
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