FFCP PHASE1:Mm9::chr15:39029790..39029813,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=116838 | |EntrezGene=116838 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9EQZ7,E9Q2I0,E9Q480,Q0VF51,D9HP81 | |UniProt=Q9EQZ7,E9Q2I0,E9Q480,Q0VF51,D9HP81 | ||
|association_with_transcript=-64bp_to_ENSMUST00000082054,ENSMUST00000110312,ENSMUST00000167407,NM_053271,uc007vod.1,uc007voe.1,uc011zsk.1_5end | |association_with_transcript=-64bp_to_ENSMUST00000082054,ENSMUST00000110312,ENSMUST00000167407,NM_053271,uc007vod.1,uc007voe.1,uc011zsk.1_5end | ||
|cluster_id=chr15:39029790..39029813,+ | |||
|description=CAGE_peak_6_at_Rims2_5end | |description=CAGE_peak_6_at_Rims2_5end | ||
|id=chr15:39029790..39029813,+ | |id=chr15:39029790..39029813,+ | ||
|ontology_enrichment_celltype=CL:0000540!3.89e-14!33;CL:0000047!3.89e-14!33;CL:0000031!3.89e-14!33;CL:0000404!3.89e-14!33;CL:0000117!6.58e-13!23;CL:0000337!6.58e-13!23;CL:0000221!4.51e-11!44;CL:0000133!4.51e-11!44;CL:0002319!1.79e-10!43;CL:0000393!8.83e-10!39;CL:0000211!8.83e-10!39;CL:0000055!4.41e-07!50 | |ontology_enrichment_celltype=CL:0000540!3.89e-14!33;CL:0000047!3.89e-14!33;CL:0000031!3.89e-14!33;CL:0000404!3.89e-14!33;CL:0000117!6.58e-13!23;CL:0000337!6.58e-13!23;CL:0000221!4.51e-11!44;CL:0000133!4.51e-11!44;CL:0002319!1.79e-10!43;CL:0000393!8.83e-10!39;CL:0000211!8.83e-10!39;CL:0000055!4.41e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.14e-15,23;CL:0000337,1.14e-15,23;CL:0000540,4.99e-12,33;CL:0000047,4.99e-12,33;CL:0000031,4.99e-12,33;CL:0000404,4.99e-12,33;CL:0000393,2.61e-09,39;CL:0000211,2.61e-09,39;CL:0000221,9.77e-09,44;CL:0000133,9.77e-09,44;CL:0002319,6.10e-08,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.94e-30!71;UBERON:0003075!2.94e-30!71;UBERON:0007284!2.94e-30!71;UBERON:0004121!4.39e-28!102;UBERON:0000924!4.39e-28!102;UBERON:0006601!4.39e-28!102;UBERON:0000033!1.16e-26!63;UBERON:0001017!2.80e-26!73;UBERON:0005743!2.80e-26!73;UBERON:0000073!5.05e-26!75;UBERON:0001016!5.05e-26!75;UBERON:0003056!3.09e-23!49;UBERON:0001049!2.51e-22!52;UBERON:0005068!2.51e-22!52;UBERON:0006241!2.51e-22!52;UBERON:0007135!2.51e-22!52;UBERON:0000955!4.26e-21!50;UBERON:0006238!4.26e-21!50;UBERON:0002616!2.80e-20!49;UBERON:0003080!1.07e-17!40;UBERON:0002780!4.57e-17!39;UBERON:0001890!4.57e-17!39;UBERON:0006240!4.57e-17!39;UBERON:0002020!7.83e-15!34;UBERON:0007811!1.71e-13!86;UBERON:0002791!5.47e-12!29;UBERON:0003528!5.47e-12!29;UBERON:0001893!5.47e-12!29;UBERON:0000153!8.14e-11!94;UBERON:0000956!8.47e-08!21;UBERON:0001869!8.47e-08!21;UBERON:0000203!8.47e-08!21;UBERON:0000020!8.15e-07!12;UBERON:0001032!8.15e-07!12;UBERON:0004456!8.15e-07!12 | |ontology_enrichment_uberon=UBERON:0002346!2.94e-30!71;UBERON:0003075!2.94e-30!71;UBERON:0007284!2.94e-30!71;UBERON:0004121!4.39e-28!102;UBERON:0000924!4.39e-28!102;UBERON:0006601!4.39e-28!102;UBERON:0000033!1.16e-26!63;UBERON:0001017!2.80e-26!73;UBERON:0005743!2.80e-26!73;UBERON:0000073!5.05e-26!75;UBERON:0001016!5.05e-26!75;UBERON:0003056!3.09e-23!49;UBERON:0001049!2.51e-22!52;UBERON:0005068!2.51e-22!52;UBERON:0006241!2.51e-22!52;UBERON:0007135!2.51e-22!52;UBERON:0000955!4.26e-21!50;UBERON:0006238!4.26e-21!50;UBERON:0002616!2.80e-20!49;UBERON:0003080!1.07e-17!40;UBERON:0002780!4.57e-17!39;UBERON:0001890!4.57e-17!39;UBERON:0006240!4.57e-17!39;UBERON:0002020!7.83e-15!34;UBERON:0007811!1.71e-13!86;UBERON:0002791!5.47e-12!29;UBERON:0003528!5.47e-12!29;UBERON:0001893!5.47e-12!29;UBERON:0000153!8.14e-11!94;UBERON:0000956!8.47e-08!21;UBERON:0001869!8.47e-08!21;UBERON:0000203!8.47e-08!21;UBERON:0000020!8.15e-07!12;UBERON:0001032!8.15e-07!12;UBERON:0004456!8.15e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.60e-36,64;UBERON:0003075,2.60e-36,64;UBERON:0007284,2.60e-36,64;UBERON:0010371,4.65e-34,73;UBERON:0004121,5.52e-33,95;UBERON:0000924,5.52e-33,95;UBERON:0006601,5.52e-33,95;UBERON:0003056,8.31e-33,49;UBERON:0000073,9.87e-32,54;UBERON:0001049,7.60e-30,52;UBERON:0005068,7.60e-30,52;UBERON:0006241,7.60e-30,52;UBERON:0007135,7.60e-30,52;UBERON:0001017,8.03e-30,73;UBERON:0001016,1.15e-28,75;UBERON:0000955,2.34e-26,47;UBERON:0006238,2.34e-26,47;UBERON:0010314,2.33e-25,92;UBERON:0002616,5.54e-25,46;UBERON:0003080,3.15e-24,40;UBERON:0002780,4.05e-23,39;UBERON:0001890,4.05e-23,39;UBERON:0006240,4.05e-23,39;UBERON:0002020,1.28e-19,34;UBERON:0003528,5.65e-16,29;UBERON:0002791,5.65e-16,29;UBERON:0001893,5.65e-16,29;UBERON:0000020,9.63e-11,12;UBERON:0001032,9.63e-11,12;UBERON:0004456,9.63e-11,12;UBERON:0000956,7.15e-10,21;UBERON:0001869,7.15e-10,21;UBERON:0000203,7.15e-10,21;UBERON:0000033,1.03e-09,13;UBERON:0005085,1.03e-09,13;UBERON:0002619,1.57e-09,17;UBERON:0000970,2.94e-09,9;UBERON:0000019,2.94e-09,9;UBERON:0000047,2.94e-09,9;UBERON:0010312,2.94e-09,9;UBERON:0004088,2.94e-09,9;UBERON:0002104,2.94e-09,9;UBERON:0001456,2.94e-09,9;UBERON:0003072,2.94e-09,9;UBERON:0004128,2.94e-09,9;UBERON:0003071,2.94e-09,9;UBERON:0004111,1.15e-08,122;UBERON:0000025,2.37e-08,114;UBERON:0001894,4.12e-08,10;UBERON:0006222,4.12e-08,10;UBERON:0002021,5.09e-08,10;UBERON:0000411,5.09e-08,10;UBERON:0001950,5.09e-08,10;UBERON:0002420,1.06e-07,8;UBERON:0007245,1.06e-07,8;UBERON:0010009,1.06e-07,8;UBERON:0010011,1.06e-07,8;UBERON:0000454,1.06e-07,8;UBERON:0000369,1.19e-07,5;UBERON:0002435,1.19e-07,5;UBERON:0000204,1.19e-07,5;UBERON:0010082,1.19e-07,5;UBERON:0000483,1.30e-07,174;UBERON:0000119,2.21e-07,176;UBERON:0001444,2.99e-07,11 | |||
|phase1_expression=7.52699581392532,0.348975407639361,0.909998478779072,0,0,1.34303417529512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0,0,0,0,0,0,0,0,2.83243045203437,0.528990979272033,3.1691570175309,0,0.889294796111139,0,0,0,0,0.768436610643109,0.933206510776299,1.62007125998029,0.420649922702764,1.71390590642282,0.883474163806454,2.69479758272899,3.35459148563827,2.75765635983006,1.10115880999389,2.17068474744819,1.38245879930619,4.2203612073662,5.03182039813253,4.16730696445408,0.837548997004143,1.12552522006336,1.37518422999129,4.41942878210502,1.99320353118744,4.65998614563251,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,2.95771181531029,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.346970653532272,0.304465478312141,0.922461989024234,0.452167921657868,1.41106448562846,0.125666591329675,0.741584903203122,0,0,0,0,0,0,2.63502717310392,2.09446706813455,0,0,0,0,2.39665023047716,1.83000241127451,1.88481528169297,2.08589184230732,1.79000820131231,1.87009240103604,3.73154905055843,0.101839363850316,0,0.252722758433675,0.631325567659422,1.17108398666433,2.06911893990126,2.16074555766419,2.86339153887859,2.9255694635071,2.562274405697,4.12287588062807,3.3631438196072,0,0,0,0,0.556094498451196,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,1.23485534855141,0,0,0.213288250535234,0,0.257734922644187,0.403367049246685,0,0,0,0.494096864172033,0,0.397912944082302,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.280543279561274,0.379419222745544,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.324270453550071,0,1.43768206527355,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0.481651769963376,1.75817529888305,0,0,0.94652465824877,0.780877488593277,0.861693590931196,0.238968797952552,0,0.566153061577665,0.809621403349789,1.16902343164525,0.395287777946524,5.46246237917072,0.283880170416537,0,0.162886959353576,0,0,0.485561272309963,0.604647113929502,0.565815239267694,0.295301892880773,0.307435147943927,0.775284879504663,0.363533729477506,1.42598951353889,0.632073515871632,0,0,3.74483566329167,1.44048875225048,0.129358683782755,2.57204442037911,1.95074257006501,3.0322698992352,2.79733335023606,0.913394847343798,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0,0,0,0.448549638131936,0.330916980914195,0,0.645799117388655,0.168956125490778,0.234714477291508,0.39061315453185,0.419437377702843,0.724752362478018,0.864090018773596,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.887943813496259,0.0897138566094757,0.167884616364078,0,0,0,0,0,1.6942555278512,2.76195141904306,4.58316410751517,2.06223818812425,2.74033007908257,2.2661816921691,0.675022500231806,0,2.71885445390523,2.07104124700728,0.518936737920883,2.79317411380722,1.87806966329548,0.486213434136588,0.838452650511929,0.183843508450014,0.666740183404846,1.03017528619447,1.60459604795908,0.505394423527595,0.50695859978048,1.13175804831646,1.03005658216871,0.832326981263301,0.918967503289812,1.90517476513229,0.811190281613988,0.77163688185482,1.23625770240992,0.883193520806384,0.685738504770831,0.887379030796687,0.476872379894642,0.581385666529314,0.564656282491984,0.761531471025089,0.914639864363863,1.05227884575137,0.679020569229309,0,0.949080144993393,0.886540341380071,0,0.619747364743864,0,0.749431733813838,1.16965804222704,1.07435527024149,0.382576664137687,0,0 | |phase1_expression=7.52699581392532,0.348975407639361,0.909998478779072,0,0,1.34303417529512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0.252030129759931,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0.194429899074283,0,0,0,0,0,0,0,0,2.83243045203437,0.528990979272033,3.1691570175309,0,0.889294796111139,0,0,0,0,0.768436610643109,0.933206510776299,1.62007125998029,0.420649922702764,1.71390590642282,0.883474163806454,2.69479758272899,3.35459148563827,2.75765635983006,1.10115880999389,2.17068474744819,1.38245879930619,4.2203612073662,5.03182039813253,4.16730696445408,0.837548997004143,1.12552522006336,1.37518422999129,4.41942878210502,1.99320353118744,4.65998614563251,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,2.95771181531029,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0.346970653532272,0.304465478312141,0.922461989024234,0.452167921657868,1.41106448562846,0.125666591329675,0.741584903203122,0,0,0,0,0,0,2.63502717310392,2.09446706813455,0,0,0,0,2.39665023047716,1.83000241127451,1.88481528169297,2.08589184230732,1.79000820131231,1.87009240103604,3.73154905055843,0.101839363850316,0,0.252722758433675,0.631325567659422,1.17108398666433,2.06911893990126,2.16074555766419,2.86339153887859,2.9255694635071,2.562274405697,4.12287588062807,3.3631438196072,0,0,0,0,0.556094498451196,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0.210289948564127,1.23485534855141,0,0,0.213288250535234,0,0.257734922644187,0.403367049246685,0,0,0,0.494096864172033,0,0.397912944082302,0,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.280543279561274,0.379419222745544,0,0,0,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0.324270453550071,0,1.43768206527355,0,0,0,0,0,0,0,0,0.169745085775188,0.234690248288502,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0,0,0,0,0,0.481651769963376,1.75817529888305,0,0,0.94652465824877,0.780877488593277,0.861693590931196,0.238968797952552,0,0.566153061577665,0.809621403349789,1.16902343164525,0.395287777946524,5.46246237917072,0.283880170416537,0,0.162886959353576,0,0,0.485561272309963,0.604647113929502,0.565815239267694,0.295301892880773,0.307435147943927,0.775284879504663,0.363533729477506,1.42598951353889,0.632073515871632,0,0,3.74483566329167,1.44048875225048,0.129358683782755,2.57204442037911,1.95074257006501,3.0322698992352,2.79733335023606,0.913394847343798,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0,0,0,0.448549638131936,0.330916980914195,0,0.645799117388655,0.168956125490778,0.234714477291508,0.39061315453185,0.419437377702843,0.724752362478018,0.864090018773596,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0.887943813496259,0.0897138566094757,0.167884616364078,0,0,0,0,0,1.6942555278512,2.76195141904306,4.58316410751517,2.06223818812425,2.74033007908257,2.2661816921691,0.675022500231806,0,2.71885445390523,2.07104124700728,0.518936737920883,2.79317411380722,1.87806966329548,0.486213434136588,0.838452650511929,0.183843508450014,0.666740183404846,1.03017528619447,1.60459604795908,0.505394423527595,0.50695859978048,1.13175804831646,1.03005658216871,0.832326981263301,0.918967503289812,1.90517476513229,0.811190281613988,0.77163688185482,1.23625770240992,0.883193520806384,0.685738504770831,0.887379030796687,0.476872379894642,0.581385666529314,0.564656282491984,0.761531471025089,0.914639864363863,1.05227884575137,0.679020569229309,0,0.949080144993393,0.886540341380071,0,0.619747364743864,0,0.749431733813838,1.16965804222704,1.07435527024149,0.382576664137687,0,0 | ||
|short_description=p6@Rims2 | |short_description=p6@Rims2 | ||
}} | }} |
Latest revision as of 18:43, 26 September 2015
Short description: | p6@Rims2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rims2_5end |
Coexpression cluster: | NA |
Association with transcript: | -64bp_to_ENSMUST00000082054, ENSMUST00000110312, ENSMUST00000167407, NM_053271, uc007vod.1, uc007voe.1, uc011zsk.1_5end |
EntrezGene: | Rims2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.14e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.14e-15 | 23 |
neuron | 4.99e-12 | 33 |
neuronal stem cell | 4.99e-12 | 33 |
neuroblast | 4.99e-12 | 33 |
electrically signaling cell | 4.99e-12 | 33 |
electrically responsive cell | 2.61e-09 | 39 |
electrically active cell | 2.61e-09 | 39 |
ectodermal cell | 9.77e-09 | 44 |
neurectodermal cell | 9.77e-09 | 44 |
neural cell | 6.10e-08 | 43 |