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FFCP PHASE1:Mm9::chr4:98590506..98590533,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=230484
|EntrezGene=230484
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q8BJQ2
|UniProt=Q8BJQ2
|association_with_transcript=5bp_to_ENSMUST00000030289,NM_146144,uc008tum.1,uc008tun.1_5end
|association_with_transcript=5bp_to_ENSMUST00000030289,NM_146144,uc008tum.1,uc008tun.1_5end
|cluster_id=chr4:98590506..98590533,+
|description=CAGE_peak_5_at_Usp1_5end
|description=CAGE_peak_5_at_Usp1_5end
|id=chr4:98590506..98590533,+
|id=chr4:98590506..98590533,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000349,4.68e-07,3;CL:0000351,4.68e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.14e-07,23;UBERON:0000974,2.14e-07,23;UBERON:0004807,2.14e-07,23;UBERON:0005058,2.14e-07,23;UBERON:0003351,2.14e-07,23;UBERON:0009113,2.14e-07,23;UBERON:0003295,2.14e-07,23;UBERON:0009722,2.14e-07,23;UBERON:0005562,2.14e-07,23;UBERON:0007690,2.14e-07,23;UBERON:0003929,3.32e-07,55;UBERON:0000358,4.68e-07,3;UBERON:0000307,4.68e-07,3;UBERON:0007010,4.68e-07,3;UBERON:0006562,5.39e-07,24;UBERON:0003408,5.39e-07,24;UBERON:0001557,5.39e-07,24;UBERON:0001042,5.39e-07,24;UBERON:0008814,5.39e-07,24;UBERON:0009145,5.39e-07,24
|phase1_expression=0.320297694209588,0.697950815278722,0,0,0,0.33575854382378,1.40167584357315,0.129123323441576,5.77233760821834,5.61754863172784,1.54096171402954,1.43589886191606,0,0.437102012094987,0.999329285446988,0.809901069559304,0,0.315462165358238,0.274228867211478,0.42438965179803,43.2870346868945,0.794327609607082,1.82839852397255,0.319984845586813,0,0,0.86152399231815,0,0.760093677825496,0.756090389279792,0.221730510655305,0.635030673459631,2.46025915033828,0,0.866554859253824,0.498703936075477,1.63335485009895,0.837063261473815,0,1.0470474879476,0,0,0.971020706062307,0.251793635951155,0.202753862439029,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0.335565212115473,0.725362142011344,0,0.514518872071894,0,0,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0.311068836925433,0,0,0,0,0.122490799214954,0,0,1.10115880999389,0,0,0.131886287730194,0,0,0,0,0.15279824777681,0.589257170947335,0.142371680799103,0.186399445825301,0.151452386666368,0.377857800533928,0,0,0,0.539703191637817,0,0,4.91555470461132,0.511290967734173,0.519572009205738,0,0,0,0,0,0.432982082022428,0.760079596425296,0.505524445014783,6.62266502370548,0.776813650941515,0.445326417194474,0,0,0.230615497256059,0,0.470354828542819,0.376999773989026,0.247194967734374,0,0,0.808834249737046,0.441683036920787,1.93950101254089,3.72783522436244,0,0,0,5.03223522924865,2.39961092397363,2.1601938602421,0,0.457500602818626,0.125654352112864,0.173824320192276,0,0,0,0.305518091550949,0.995255764880744,0.505445516867349,0,0.390361328888111,0,0.360124259610698,0.30140963567143,0.408218994907967,1.15302348256365,0.655912071918102,0.258703370739016,0.862271971731369,0.189106080167819,0.175951124163949,0,0.556094498451196,0.348252166522167,0,0.199034266818493,4.21327912387941,4.37491442095016,4.26245249093389,0.414251545071004,0.234526059981096,0.180062061461015,0.473489471170421,0.393528463494808,0.462801338662135,0.465067889500816,0.536546802799238,0,0.16455984991348,0.492502392237286,0,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0.793351699990633,0,0.696710015581316,0.644337306610467,0.605050573870028,0.667134131534611,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0.685491075658373,0,0.203651327845314,0.193952487167626,0.350679099451593,0.316182685621286,0.147610147979602,0,0.246794327843601,0.296452627087149,0.500535317148282,2.16214894624523,1.34917267430912,1.01430060694251,1.4470629585145,1.01850340712568,0,0.648540907100142,0,1.43768206527355,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,0.369506380333209,0.189491411770485,0.325929952884052,0.678980343100753,0.234690248288502,0.502518772325447,0,0.195133647857799,0.472905432318573,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0.551873492609465,0.160550589987792,0,0.655739781506702,0.504941854408746,0.315508219416257,0.780877488593277,0.646270193198397,0,0.445597348164788,0.849229592366497,0.404810701674894,0.292255857911312,0.790575555893047,0,0,0.35613120733451,0.162886959353576,0,0,0.485561272309963,0,0.943025398779491,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.493647061806363,0,2.58138878870081,0.63549621259146,0,0.65954501176592,0.484393280087717,0.844380948994182,1.43246812803764,0.656563598980245,0,0.18542530201051,0,0.412773735926445,0.370389054739423,0.376736914009382,1.0935538217682,0.686334519619568,2.20971958992012,1.25956307091292,1.65839968565309,0,0.158167996790568,0.609958401380546,0.216010681643603,0.627264888043406,0,0.134864346384821,0.41326727862668,0.523511883968059,0.259229946583586,0,347.798543168145,0.598066184175915,0.330916980914195,0,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.419437377702843,91.3187976722303,182.322993961229,1.89606672376907,0.202725215290164,0.821687657318618,1.03936658382236,1.79026695667481,1.19208812868759,1.20195449519969,1.03382669022204,0.605798699688886,1.905170166375,0.907435666231565,0.487289403698762,0.962118416403295,0.584384510907845,0.226730383615211,3.7737612073591,3.22969883794113,5.87596157274275,0,0.187682475451182,0,0.643105137237198,0,0,0.460325236507177,0,0.171853182343688,1.37016503954128,0,0.675022500231806,0.45032120322422,0,0,0.31136204275253,0.399024873401031,0.341467211508268,0.243106717068294,0.838452650511929,0.367687016900028,0.44449345560323,0.824140228955577,0.962757628775446,0,0.50695859978048,0.377252682772152,0.187283014939765,0.384150914429216,0.402048282689293,0,0.463537303779422,0,0,0.294397840268795,0,0.177475806159338,0.476872379894642,0.436039249896986,0.564656282491984,0.0846146078916765,0.182927972872773,0,0,1.12228454331548,0.355905054372522,0.492522411877817,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0.382576664137687,0.661774257358546,0.231867835620421
|phase1_expression=0.320297694209588,0.697950815278722,0,0,0,0.33575854382378,1.40167584357315,0.129123323441576,5.77233760821834,5.61754863172784,1.54096171402954,1.43589886191606,0,0.437102012094987,0.999329285446988,0.809901069559304,0,0.315462165358238,0.274228867211478,0.42438965179803,43.2870346868945,0.794327609607082,1.82839852397255,0.319984845586813,0,0,0.86152399231815,0,0.760093677825496,0.756090389279792,0.221730510655305,0.635030673459631,2.46025915033828,0,0.866554859253824,0.498703936075477,1.63335485009895,0.837063261473815,0,1.0470474879476,0,0,0.971020706062307,0.251793635951155,0.202753862439029,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0.335565212115473,0.725362142011344,0,0.514518872071894,0,0,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0.311068836925433,0,0,0,0,0.122490799214954,0,0,1.10115880999389,0,0,0.131886287730194,0,0,0,0,0.15279824777681,0.589257170947335,0.142371680799103,0.186399445825301,0.151452386666368,0.377857800533928,0,0,0,0.539703191637817,0,0,4.91555470461132,0.511290967734173,0.519572009205738,0,0,0,0,0,0.432982082022428,0.760079596425296,0.505524445014783,6.62266502370548,0.776813650941515,0.445326417194474,0,0,0.230615497256059,0,0.470354828542819,0.376999773989026,0.247194967734374,0,0,0.808834249737046,0.441683036920787,1.93950101254089,3.72783522436244,0,0,0,5.03223522924865,2.39961092397363,2.1601938602421,0,0.457500602818626,0.125654352112864,0.173824320192276,0,0,0,0.305518091550949,0.995255764880744,0.505445516867349,0,0.390361328888111,0,0.360124259610698,0.30140963567143,0.408218994907967,1.15302348256365,0.655912071918102,0.258703370739016,0.862271971731369,0.189106080167819,0.175951124163949,0,0.556094498451196,0.348252166522167,0,0.199034266818493,4.21327912387941,4.37491442095016,4.26245249093389,0.414251545071004,0.234526059981096,0.180062061461015,0.473489471170421,0.393528463494808,0.462801338662135,0.465067889500816,0.536546802799238,0,0.16455984991348,0.492502392237286,0,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0.793351699990633,0,0.696710015581316,0.644337306610467,0.605050573870028,0.667134131534611,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.38992817423824,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0.685491075658373,0,0.203651327845314,0.193952487167626,0.350679099451593,0.316182685621286,0.147610147979602,0,0.246794327843601,0.296452627087149,0.500535317148282,2.16214894624523,1.34917267430912,1.01430060694251,1.4470629585145,1.01850340712568,0,0.648540907100142,0,1.43768206527355,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,0.369506380333209,0.189491411770485,0.325929952884052,0.678980343100753,0.234690248288502,0.502518772325447,0,0.195133647857799,0.472905432318573,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0.491764273019036,0.551873492609465,0.160550589987792,0,0.655739781506702,0.504941854408746,0.315508219416257,0.780877488593277,0.646270193198397,0,0.445597348164788,0.849229592366497,0.404810701674894,0.292255857911312,0.790575555893047,0,0,0.35613120733451,0.162886959353576,0,0,0.485561272309963,0,0.943025398779491,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.493647061806363,0,2.58138878870081,0.63549621259146,0,0.65954501176592,0.484393280087717,0.844380948994182,1.43246812803764,0.656563598980245,0,0.18542530201051,0,0.412773735926445,0.370389054739423,0.376736914009382,1.0935538217682,0.686334519619568,2.20971958992012,1.25956307091292,1.65839968565309,0,0.158167996790568,0.609958401380546,0.216010681643603,0.627264888043406,0,0.134864346384821,0.41326727862668,0.523511883968059,0.259229946583586,0,347.798543168145,0.598066184175915,0.330916980914195,0,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.419437377702843,91.3187976722303,182.322993961229,1.89606672376907,0.202725215290164,0.821687657318618,1.03936658382236,1.79026695667481,1.19208812868759,1.20195449519969,1.03382669022204,0.605798699688886,1.905170166375,0.907435666231565,0.487289403698762,0.962118416403295,0.584384510907845,0.226730383615211,3.7737612073591,3.22969883794113,5.87596157274275,0,0.187682475451182,0,0.643105137237198,0,0,0.460325236507177,0,0.171853182343688,1.37016503954128,0,0.675022500231806,0.45032120322422,0,0,0.31136204275253,0.399024873401031,0.341467211508268,0.243106717068294,0.838452650511929,0.367687016900028,0.44449345560323,0.824140228955577,0.962757628775446,0,0.50695859978048,0.377252682772152,0.187283014939765,0.384150914429216,0.402048282689293,0,0.463537303779422,0,0,0.294397840268795,0,0.177475806159338,0.476872379894642,0.436039249896986,0.564656282491984,0.0846146078916765,0.182927972872773,0,0,1.12228454331548,0.355905054372522,0.492522411877817,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0.382576664137687,0.661774257358546,0.231867835620421
|short_description=p5@Usp1
|short_description=p5@Usp1
}}
}}

Latest revision as of 08:00, 27 September 2015

Short description:p5@Usp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Usp1_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 5bp_to_ENSMUST00000030289, NM_146144, uc008tum.1, uc008tun.1_5end
EntrezGene:Usp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Usp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A343.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.62
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.26
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5347.80
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H391.32
testis, neonate N30.CNhs11130.1391-42E2182.32
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.88
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
extraembryonic cell4.68e-073
trophoblast cell4.68e-073

Uber anatomy
Ontology termp-valuen
thymus2.14e-0723
neck2.14e-0723
respiratory system epithelium2.14e-0723
hemolymphoid system gland2.14e-0723
pharyngeal epithelium2.14e-0723
thymic region2.14e-0723
pharyngeal gland2.14e-0723
entire pharyngeal arch endoderm2.14e-0723
thymus primordium2.14e-0723
early pharyngeal endoderm2.14e-0723
gut epithelium3.32e-0755
blastocyst4.68e-073
blastula4.68e-073
cleaving embryo4.68e-073
pharynx5.39e-0724
gland of gut5.39e-0724
upper respiratory tract5.39e-0724
chordate pharynx5.39e-0724
pharyngeal arch system5.39e-0724
pharyngeal region of foregut5.39e-0724
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