FFCP PHASE1:Mm9::chr4:80480267..80480280,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22178 | |EntrezGene=22178 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=P07147 | |UniProt=P07147 | ||
|association_with_transcript=56bp_to_ENSMUST00000102831,uc008tjs.1_5end | |association_with_transcript=56bp_to_ENSMUST00000102831,uc008tjs.1_5end | ||
|cluster_id=chr4:80480267..80480280,+ | |||
|description=CAGE_peak_4_at_Tyrp1_5end | |description=CAGE_peak_4_at_Tyrp1_5end | ||
|id=chr4:80480267..80480280,+ | |id=chr4:80480267..80480280,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.13e-24!9;UBERON:0000019!1.13e-24!9;UBERON:0000047!1.13e-24!9;UBERON:0004088!1.13e-24!9;UBERON:0002104!1.13e-24!9;UBERON:0001456!1.13e-24!9;UBERON:0003072!1.13e-24!9;UBERON:0003071!1.13e-24!9;UBERON:0004128!1.13e-24!9;UBERON:0001444!7.51e-20!11;UBERON:0000020!4.84e-18!12;UBERON:0001032!4.84e-18!12;UBERON:0004456!4.84e-18!12;UBERON:0005085!1.64e-16!13;UBERON:0000014!4.19e-13!5;UBERON:0001003!4.19e-13!5;UBERON:0002097!4.19e-13!5;UBERON:0002199!4.19e-13!5;UBERON:0007029!4.19e-13!5;UBERON:0007376!4.19e-13!5;UBERON:0002416!4.19e-13!5;UBERON:0007383!4.19e-13!5;UBERON:0003056!4.80e-09!49;UBERON:0004121!1.25e-07!102;UBERON:0000924!1.25e-07!102;UBERON:0006601!1.25e-07!102;UBERON:0000033!3.06e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.86e-71,9;UBERON:0000019,1.86e-71,9;UBERON:0000047,1.86e-71,9;UBERON:0010312,1.86e-71,9;UBERON:0004088,1.86e-71,9;UBERON:0002104,1.86e-71,9;UBERON:0001456,1.86e-71,9;UBERON:0003072,1.86e-71,9;UBERON:0004128,1.86e-71,9;UBERON:0003071,1.86e-71,9;UBERON:0001444,2.02e-58,11;UBERON:0000020,1.57e-53,12;UBERON:0001032,1.57e-53,12;UBERON:0004456,1.57e-53,12;UBERON:0000033,2.17e-49,13;UBERON:0005085,2.17e-49,13;UBERON:0007811,1.48e-17,36;UBERON:0000153,1.32e-14,43;UBERON:0003056,9.62e-13,49;UBERON:0010371,1.39e-12,73;UBERON:0002346,1.33e-09,64;UBERON:0003075,1.33e-09,64;UBERON:0007284,1.33e-09,64;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0000014,4.01e-07,5;UBERON:0001003,4.01e-07,5;UBERON:0002097,4.01e-07,5;UBERON:0002199,4.01e-07,5;UBERON:0007029,4.01e-07,5;UBERON:0007376,4.01e-07,5;UBERON:0002416,4.01e-07,5;UBERON:0007383,4.01e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78634866779954,1.30120442962704,1.60931473103431,3.06105620669094,2.86339153887859,4.01415344992834,4.35586648968489,5.43470002446427,16.298312356558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.49465875882444,0.161464426695906,0.844380948994182,2.14870219205646,1.14898629821543,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.701794825336225,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0.226714680320357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78634866779954,1.30120442962704,1.60931473103431,3.06105620669094,2.86339153887859,4.01415344992834,4.35586648968489,5.43470002446427,16.298312356558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0.49465875882444,0.161464426695906,0.844380948994182,2.14870219205646,1.14898629821543,0,0,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.701794825336225,0,0.191288332068843,0,0 | ||
|short_description=p4@Tyrp1 | |short_description=p4@Tyrp1 | ||
}} | }} |
Latest revision as of 05:35, 27 September 2015
Short description: | p4@Tyrp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tyrp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 56bp_to_ENSMUST00000102831, uc008tjs.1_5end |
EntrezGene: | Tyrp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.86e-71 | 9 |
camera-type eye | 1.86e-71 | 9 |
simple eye | 1.86e-71 | 9 |
immature eye | 1.86e-71 | 9 |
ocular region | 1.86e-71 | 9 |
visual system | 1.86e-71 | 9 |
face | 1.86e-71 | 9 |
optic cup | 1.86e-71 | 9 |
optic vesicle | 1.86e-71 | 9 |
eye primordium | 1.86e-71 | 9 |
subdivision of head | 2.02e-58 | 11 |
sense organ | 1.57e-53 | 12 |
sensory system | 1.57e-53 | 12 |
entire sense organ system | 1.57e-53 | 12 |
head | 2.17e-49 | 13 |
ectodermal placode | 2.17e-49 | 13 |
craniocervical region | 1.48e-17 | 36 |
anterior region of body | 1.32e-14 | 43 |
pre-chordal neural plate | 9.62e-13 | 49 |
ecto-epithelium | 1.39e-12 | 73 |
neurectoderm | 1.33e-09 | 64 |
neural plate | 1.33e-09 | 64 |
presumptive neural plate | 1.33e-09 | 64 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
zone of skin | 4.01e-07 | 5 |
skin epidermis | 4.01e-07 | 5 |
skin of body | 4.01e-07 | 5 |
integument | 4.01e-07 | 5 |
surface | 4.01e-07 | 5 |
outer epithelium | 4.01e-07 | 5 |
integumental system | 4.01e-07 | 5 |
enveloping layer of ectoderm | 4.01e-07 | 5 |