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FFCP PHASE1:Mm9::chr7:104936858..104936900,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18479
|EntrezGene=18479
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=G3XA44,Q9R2B2
|UniProt=G3XA44,Q9R2B2
|association_with_transcript=-150bp_to_ENSMUST00000172423,uc009iju.1_5end
|association_with_transcript=-150bp_to_ENSMUST00000172423,uc009iju.1_5end
|cluster_id=chr7:104936858..104936900,+
|description=CAGE_peak_6_at_Pak1_5end
|description=CAGE_peak_6_at_Pak1_5end
|id=chr7:104936858..104936900,+
|id=chr7:104936858..104936900,+
|ontology_enrichment_celltype=CL:0000117!1.53e-18!23;CL:0000337!1.53e-18!23;CL:0000540!2.61e-13!33;CL:0000047!2.61e-13!33;CL:0000031!2.61e-13!33;CL:0000404!2.61e-13!33;CL:0000393!5.76e-11!39;CL:0000211!5.76e-11!39;CL:0000221!1.32e-10!44;CL:0000133!1.32e-10!44;CL:0002319!1.60e-10!43;CL:0000055!1.42e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.30e-36,23;CL:0000337,1.30e-36,23;CL:0000540,1.19e-23,33;CL:0000047,1.19e-23,33;CL:0000031,1.19e-23,33;CL:0000404,1.19e-23,33;CL:0000393,4.41e-19,39;CL:0000211,4.41e-19,39;CL:0002319,9.45e-17,43;CL:0000221,3.10e-16,44;CL:0000133,3.10e-16,44;CL:0002609,7.85e-09,6;CL:0002321,4.29e-08,70;CL:0002613,1.77e-07,3;CL:0000120,6.95e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.67e-23!75;UBERON:0001016!1.67e-23!75;UBERON:0002020!6.03e-23!34;UBERON:0001017!7.81e-23!73;UBERON:0005743!7.81e-23!73;UBERON:0001049!1.06e-22!52;UBERON:0005068!1.06e-22!52;UBERON:0006241!1.06e-22!52;UBERON:0007135!1.06e-22!52;UBERON:0000955!3.49e-21!50;UBERON:0006238!3.49e-21!50;UBERON:0002616!1.31e-20!49;UBERON:0002791!2.89e-19!29;UBERON:0003528!2.89e-19!29;UBERON:0001893!2.89e-19!29;UBERON:0000033!2.20e-18!63;UBERON:0004121!1.30e-17!102;UBERON:0000924!1.30e-17!102;UBERON:0006601!1.30e-17!102;UBERON:0003080!3.35e-17!40;UBERON:0002780!1.41e-16!39;UBERON:0001890!1.41e-16!39;UBERON:0006240!1.41e-16!39;UBERON:0002346!2.56e-16!71;UBERON:0003075!2.56e-16!71;UBERON:0007284!2.56e-16!71;UBERON:0003056!1.86e-15!49;UBERON:0000956!4.05e-13!21;UBERON:0001869!4.05e-13!21;UBERON:0000203!4.05e-13!21;UBERON:0002619!6.42e-10!17;UBERON:0007811!2.19e-09!86;UBERON:0002021!1.05e-08!10;UBERON:0000411!1.05e-08!10;UBERON:0001950!1.05e-08!10;UBERON:0002420!2.07e-07!8;UBERON:0007245!2.07e-07!8;UBERON:0010009!2.07e-07!8;UBERON:0010011!2.07e-07!8;UBERON:0000454!2.07e-07!8;UBERON:0000153!3.38e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.87e-48,34;UBERON:0000073,1.05e-45,54;UBERON:0001049,2.90e-42,52;UBERON:0005068,2.90e-42,52;UBERON:0006241,2.90e-42,52;UBERON:0007135,2.90e-42,52;UBERON:0003528,3.57e-40,29;UBERON:0002791,3.57e-40,29;UBERON:0001893,3.57e-40,29;UBERON:0001017,7.60e-40,73;UBERON:0001016,1.63e-38,75;UBERON:0003080,3.21e-34,40;UBERON:0002616,3.62e-33,46;UBERON:0002780,7.73e-33,39;UBERON:0001890,7.73e-33,39;UBERON:0006240,7.73e-33,39;UBERON:0002346,1.35e-32,64;UBERON:0003075,1.35e-32,64;UBERON:0007284,1.35e-32,64;UBERON:0000955,2.75e-32,47;UBERON:0006238,2.75e-32,47;UBERON:0004121,2.79e-28,95;UBERON:0000924,2.79e-28,95;UBERON:0006601,2.79e-28,95;UBERON:0010371,1.98e-27,73;UBERON:0003056,1.70e-26,49;UBERON:0000956,2.13e-26,21;UBERON:0001869,2.13e-26,21;UBERON:0000203,2.13e-26,21;UBERON:0010314,7.50e-20,92;UBERON:0002619,2.78e-19,17;UBERON:0002021,1.52e-17,10;UBERON:0000411,1.52e-17,10;UBERON:0001950,1.52e-17,10;UBERON:0002420,1.17e-14,8;UBERON:0007245,1.17e-14,8;UBERON:0010009,1.17e-14,8;UBERON:0010011,1.17e-14,8;UBERON:0000454,1.17e-14,8;UBERON:0000025,3.02e-14,114;UBERON:0004111,1.03e-12,122;UBERON:0000369,1.17e-10,5;UBERON:0002435,1.17e-10,5;UBERON:0000204,1.17e-10,5;UBERON:0010082,1.17e-10,5;UBERON:0002240,3.03e-10,6;UBERON:0005174,3.03e-10,6;UBERON:0001137,3.03e-10,6;UBERON:0001948,4.79e-09,5;UBERON:0002315,4.79e-09,5;UBERON:0011216,1.18e-08,194;UBERON:0003076,3.65e-08,12;UBERON:0003057,3.65e-08,12;UBERON:0002950,6.29e-07,4;UBERON:0001891,6.29e-07,4;UBERON:0009616,6.29e-07,4;UBERON:0010286,6.29e-07,4
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0,0.279972843250725,0,0.167782606057736,0,0,0,0,0,5.86717736492834,5.81890077199236,3.1691570175309,0,0,0,0,0,0,0,6.63613518774257,5.40023753326763,5.25812403378455,3.14216082844184,2.20868540951614,5.51208596467293,5.271500906003,0.919218786610021,1.10115880999389,3.70293280447044,3.68655679814984,8.83638127792299,7.04454855738554,6.25096044668112,2.51264699101243,2.25105044012672,2.13917546887534,2.35702868378934,3.27454865837937,4.65998614563251,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0.359445373517761,0,0,2.09706895166752,1.37250180845588,10.3036568732549,4.51943232499919,3.58001640262463,3.32460871295296,1.78465389374533,0,0,0,0,0.260240885925407,0,0.180062129805349,0.452114453507145,0.340182495756639,0,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0.702213187313235,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,5.35103984372279,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0.667134131534611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,2.72936002979246,1.99259867206745,0,0,0,0,0,0,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0.963963949265421,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0.388076051348264,0.643011105094777,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0.291480836629851,1.29797711407357,0,0,0,0,0,0.228778173206523,0.169978429993855,0.139951452323658,0,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,3.38215763210514,0,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0.943734099831398,1.20792060413003,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,2.76195141904306,4.58316410751517,3.09335728218638,4.7955776383945,3.0215755895588,3.37511250115903,5.85417564191487,5.43770890781046,3.10656187051092,0.415149390336707,0,1.36586884603307,0.729320151204882,0.628839487883947,0.735374033800057,0,1.03017528619447,0.64183841918363,0.505394423527595,0,0.754505365544305,1.03005658216871,0.512201219238954,0.976402972245426,0,0.811190281613988,0.77163688185482,0,0.735994600671987,0.342869252385415,0.354951612318675,0.715308569841963,0.726732083161643,0.470546902076653,0.423073039458382,0.73171189149109,0,0.679020569229309,0,0.711810108745045,0.886540341380071,0,0.929621047115796,0.578719832943424,2.49810577937946,0.701794825336225,0,0.382576664137687,0,0
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0.16787927191189,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0.683045484958446,0,0,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0,0.279972843250725,0,0.167782606057736,0,0,0,0,0,5.86717736492834,5.81890077199236,3.1691570175309,0,0,0,0,0,0,0,6.63613518774257,5.40023753326763,5.25812403378455,3.14216082844184,2.20868540951614,5.51208596467293,5.271500906003,0.919218786610021,1.10115880999389,3.70293280447044,3.68655679814984,8.83638127792299,7.04454855738554,6.25096044668112,2.51264699101243,2.25105044012672,2.13917546887534,2.35702868378934,3.27454865837937,4.65998614563251,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0.494389935468748,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0.359445373517761,0,0,2.09706895166752,1.37250180845588,10.3036568732549,4.51943232499919,3.58001640262463,3.32460871295296,1.78465389374533,0,0,0,0,0.260240885925407,0,0.180062129805349,0.452114453507145,0.340182495756639,0,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0.702213187313235,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,5.35103984372279,0,0,0.426576501070468,0.232236671860439,0,0.201683524623343,0.667134131534611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,2.72936002979246,1.99259867206745,0,0,0,0,0,0,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0.963963949265421,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0.388076051348264,0.643011105094777,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0.291480836629851,1.29797711407357,0,0,0,0,0,0.228778173206523,0.169978429993855,0.139951452323658,0,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0.129614973291793,0,3.38215763210514,0,0.165458490457098,0,0.129159823477731,0,0,0.13020438484395,0.943734099831398,1.20792060413003,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,2.76195141904306,4.58316410751517,3.09335728218638,4.7955776383945,3.0215755895588,3.37511250115903,5.85417564191487,5.43770890781046,3.10656187051092,0.415149390336707,0,1.36586884603307,0.729320151204882,0.628839487883947,0.735374033800057,0,1.03017528619447,0.64183841918363,0.505394423527595,0,0.754505365544305,1.03005658216871,0.512201219238954,0.976402972245426,0,0.811190281613988,0.77163688185482,0,0.735994600671987,0.342869252385415,0.354951612318675,0.715308569841963,0.726732083161643,0.470546902076653,0.423073039458382,0.73171189149109,0,0.679020569229309,0,0.711810108745045,0.886540341380071,0,0.929621047115796,0.578719832943424,2.49810577937946,0.701794825336225,0,0.382576664137687,0,0
|short_description=p6@Pak1
|short_description=p6@Pak1
}}
}}

Latest revision as of 13:44, 25 September 2015

Short description:p6@Pak1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Pak1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -150bp_to_ENSMUST00000172423, uc009iju.1_5end
EntrezGene:Pak1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Pak1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.51
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F110.30
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter1.87e-4834
regional part of nervous system1.05e-4554
neural tube2.90e-4252
neural rod2.90e-4252
future spinal cord2.90e-4252
neural keel2.90e-4252
brain grey matter3.57e-4029
regional part of telencephalon3.57e-4029
telencephalon3.57e-4029
central nervous system7.60e-4073
nervous system1.63e-3875
anterior neural tube3.21e-3440
regional part of brain3.62e-3346
regional part of forebrain7.73e-3339
forebrain7.73e-3339
future forebrain7.73e-3339
neurectoderm1.35e-3264
neural plate1.35e-3264
presumptive neural plate1.35e-3264
brain2.75e-3247
future brain2.75e-3247
ectoderm-derived structure2.79e-2895
ectoderm2.79e-2895
presumptive ectoderm2.79e-2895
ecto-epithelium1.98e-2773
pre-chordal neural plate1.70e-2649
cerebral cortex2.13e-2621
cerebral hemisphere2.13e-2621
pallium2.13e-2621
structure with developmental contribution from neural crest7.50e-2092
regional part of cerebral cortex2.78e-1917
occipital lobe1.52e-1710
visual cortex1.52e-1710
neocortex1.52e-1710
basal ganglion1.17e-148
nuclear complex of neuraxis1.17e-148
aggregate regional part of brain1.17e-148
collection of basal ganglia1.17e-148
cerebral subcortex1.17e-148
tube3.02e-14114
anatomical conduit1.03e-12122
corpus striatum1.17e-105
striatum1.17e-105
ventral part of telencephalon1.17e-105
future corpus striatum1.17e-105
spinal cord3.03e-106
dorsal region element3.03e-106
dorsum3.03e-106
regional part of spinal cord4.79e-095
gray matter of spinal cord4.79e-095
organ system subdivision1.18e-08194
posterior neural tube3.65e-0812
chordal neural plate3.65e-0812
regional part of midbrain6.29e-074
midbrain6.29e-074
presumptive midbrain6.29e-074
midbrain neural tube6.29e-074
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