FFCP PHASE1:Mm9::chr6:78418536..78418572,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:78418536..78418572,- | |||
|description=CAGE_peak_at_chr6:78418536..78418572,- | |description=CAGE_peak_at_chr6:78418536..78418572,- | ||
|id=chr6:78418536..78418572,- | |id=chr6:78418536..78418572,- | ||
|ontology_enrichment_celltype=CL:0002563!9.69e-14!9;CL:0002251!9.69e-14!9;CL:0000239!1.19e-12!6;CL:0000677!1.19e-12!6;CL:0000212!1.19e-12!6;CL:0000584!1.19e-12!6;CL:0000075!1.03e-10!7;CL:0000066!1.22e-09!25;CL:0002076!1.31e-09!15;CL:0000473!1.45e-07!3;CL:0000627!1.45e-07!3;CL:0000682!1.45e-07!3;CL:0000223!9.56e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.85e-22,6;CL:0000677,3.85e-22,6;CL:0000584,3.85e-22,6;CL:0000075,6.52e-19,7;CL:0002563,1.33e-14,9;CL:0002251,1.33e-14,9;CL:0000066,1.44e-13,25;CL:0000682,1.05e-12,3;CL:0002076,2.46e-11,15;CL:0000223,2.70e-08,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.02e-25!15;UBERON:0001242!2.12e-21!13;UBERON:0000060!2.12e-21!13;UBERON:0001262!2.12e-21!13;UBERON:0004786!2.12e-21!13;UBERON:0000160!9.03e-15!43;UBERON:0004923!2.66e-14!24;UBERON:0003350!9.69e-14!9;UBERON:0004808!9.69e-14!9;UBERON:0001277!9.69e-14!9;UBERON:0000485!5.97e-11!11;UBERON:0001007!4.97e-10!128;UBERON:0001555!4.97e-10!128;UBERON:0007026!4.97e-10!128;UBERON:0004119!9.49e-10!130;UBERON:0000925!9.49e-10!130;UBERON:0006595!9.49e-10!130;UBERON:0005409!2.40e-09!59;UBERON:0004921!1.67e-08!126;UBERON:0004185!1.67e-08!126;UBERON:0000331!1.32e-07!3;UBERON:0002116!1.32e-07!3;UBERON:0001204!1.32e-07!3;UBERON:0001168!1.32e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.18e-34,15;UBERON:0000160,2.66e-28,31;UBERON:0001242,9.28e-28,13;UBERON:0001262,9.28e-28,13;UBERON:0004786,9.28e-28,13;UBERON:0004923,1.06e-20,24;UBERON:0005409,1.14e-17,47;UBERON:0003350,1.33e-14,9;UBERON:0004808,1.33e-14,9;UBERON:0001277,1.33e-14,9;UBERON:0000331,8.83e-13,3;UBERON:0002116,8.83e-13,3;UBERON:0001204,8.83e-13,3;UBERON:0001168,8.83e-13,3;UBERON:0000485,7.48e-12,11;UBERON:0002108,1.07e-09,4;UBERON:0001962,2.12e-08,2;UBERON:0001961,2.12e-08,2;UBERON:0001744,2.12e-08,2;UBERON:0001007,2.77e-08,116;UBERON:0001555,2.77e-08,116;UBERON:0007026,2.77e-08,116;UBERON:0004119,4.40e-08,118;UBERON:0000925,4.40e-08,118;UBERON:0006595,4.40e-08,118 | |||
|phase1_expression=0,24.7772539423946,33.2149444754361,8.46899791659124,11.0197060588196,3.52546471014969,15.6520469199002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,15.1992801653736,15.3704218315004,37.8993096315913,28.4302917464989,29.088616412595,39.144824408013,19.1542898617547,66.2974226859361,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,1.08245520505607,0,0,6.62266502370548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1592791406444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,31.2051668662982,0,0,0,0,0,0,22.7773949541366,0,0,0,0,10.7858329038507,1.29682829924817,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476087281772027,0.585400943573396,0.157635144106191,0,0.159454768657487,0.491589944147214,0.345369963731791,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0.194915761479505,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,24.7772539423946,33.2149444754361,8.46899791659124,11.0197060588196,3.52546471014969,15.6520469199002,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,15.1992801653736,15.3704218315004,37.8993096315913,28.4302917464989,29.088616412595,39.144824408013,19.1542898617547,66.2974226859361,0,0,0,0,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,1.08245520505607,0,0,6.62266502370548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.1592791406444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,31.2051668662982,0,0,0,0,0,0,22.7773949541366,0,0,0,0,10.7858329038507,1.29682829924817,1.59313018603494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476087281772027,0.585400943573396,0.157635144106191,0,0.159454768657487,0.491589944147214,0.345369963731791,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0.194915761479505,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:78418536..78418572,- | |short_description=p@chr6:78418536..78418572,- | ||
}} | }} |
Latest revision as of 03:43, 6 August 2015
Short description: | p@chr6:78418536..78418572, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78418536..78418572, - |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.85e-22 | 6 |
gut absorptive cell | 3.85e-22 | 6 |
enterocyte | 3.85e-22 | 6 |
columnar/cuboidal epithelial cell | 6.52e-19 | 7 |
intestinal epithelial cell | 1.33e-14 | 9 |
epithelial cell of alimentary canal | 1.33e-14 | 9 |
epithelial cell | 1.44e-13 | 25 |
M cell of gut | 1.05e-12 | 3 |
endo-epithelial cell | 2.46e-11 | 15 |
endodermal cell | 2.70e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.18e-34 | 15 |
intestine | 2.66e-28 | 31 |
intestinal mucosa | 9.28e-28 | 13 |
wall of intestine | 9.28e-28 | 13 |
gastrointestinal system mucosa | 9.28e-28 | 13 |
organ component layer | 1.06e-20 | 24 |
gastrointestinal system | 1.14e-17 | 47 |
epithelium of mucosa | 1.33e-14 | 9 |
gastrointestinal system epithelium | 1.33e-14 | 9 |
intestinal epithelium | 1.33e-14 | 9 |
ileal mucosa | 8.83e-13 | 3 |
ileum | 8.83e-13 | 3 |
mucosa of small intestine | 8.83e-13 | 3 |
wall of small intestine | 8.83e-13 | 3 |
simple columnar epithelium | 7.48e-12 | 11 |
small intestine | 1.07e-09 | 4 |
gut-associated lymphoid tissue | 2.12e-08 | 2 |
mucosa-associated lymphoid tissue | 2.12e-08 | 2 |
lymphoid tissue | 2.12e-08 | 2 |
digestive system | 2.77e-08 | 116 |
digestive tract | 2.77e-08 | 116 |
primitive gut | 2.77e-08 | 116 |
endoderm-derived structure | 4.40e-08 | 118 |
endoderm | 4.40e-08 | 118 |
presumptive endoderm | 4.40e-08 | 118 |