FFCP PHASE1:Mm9::chr4:135748823..135748835,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=261 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:135748823..135748835,+ | |||
|description=CAGE_peak_at_chr4:135748823..135748835,+ | |description=CAGE_peak_at_chr4:135748823..135748835,+ | ||
|id=chr4:135748823..135748835,+ | |id=chr4:135748823..135748835,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!4.17e-11!51;UBERON:0001041!1.30e-09!92;UBERON:0004177!6.07e-09!29;UBERON:0002405!7.69e-09!70;UBERON:0001048!7.73e-09!147;UBERON:0000077!2.04e-08!97;UBERON:0001007!9.45e-08!128;UBERON:0001555!9.45e-08!128;UBERON:0007026!9.45e-08!128;UBERON:0004921!1.16e-07!126;UBERON:0004185!1.16e-07!126;UBERON:0003104!1.38e-07!131;UBERON:0009142!1.38e-07!131;UBERON:0004119!2.13e-07!130;UBERON:0000925!2.13e-07!130;UBERON:0006595!2.13e-07!130;UBERON:0000926!2.71e-07!193;UBERON:0004120!2.71e-07!193;UBERON:0006603!2.71e-07!193;UBERON:0002106!3.72e-07!6;UBERON:0004457!3.72e-07!6;UBERON:0000042!3.72e-07!6;UBERON:0004854!3.72e-07!6;UBERON:0009034!3.72e-07!6;UBERON:0002095!3.72e-07!6;UBERON:0004782!3.72e-07!6;UBERON:0003281!3.72e-07!6;UBERON:0009664!3.72e-07!6;UBERON:0002296!3.72e-07!6;UBERON:0005602!3.72e-07!6;UBERON:0001179!3.72e-07!6;UBERON:0006293!3.72e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.80e-11,6;UBERON:0004457,1.80e-11,6;UBERON:0000042,1.80e-11,6;UBERON:0004854,1.80e-11,6;UBERON:0009034,1.80e-11,6;UBERON:0002095,1.80e-11,6;UBERON:0004782,1.80e-11,6;UBERON:0003281,1.80e-11,6;UBERON:0009664,1.80e-11,6;UBERON:0002296,1.80e-11,6;UBERON:0005602,1.80e-11,6;UBERON:0001179,1.80e-11,6;UBERON:0006293,1.80e-11,6;UBERON:0003887,2.64e-10,10;UBERON:0004177,1.04e-09,29;UBERON:0005057,1.04e-09,29;UBERON:0001041,2.22e-08,80;UBERON:0004921,5.82e-08,114;UBERON:0000077,8.32e-08,35;UBERON:0001007,9.09e-08,116;UBERON:0001555,9.09e-08,116;UBERON:0007026,9.09e-08,116;UBERON:0004119,1.40e-07,118;UBERON:0000925,1.40e-07,118;UBERON:0006595,1.40e-07,118;UBERON:0002390,3.29e-07,45;UBERON:0003061,3.29e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,2.79824751251259,0.315462165358238,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0,0,0,0,0,5.30766331169925,0.161766849947409,1.10420759230197,0.969750506270444,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,1.7416975885413,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,1.42358718463353,0,0,0.198956472041151,0,0.898819408654221,0.432276099749388,0.199141273254367,0.379335801906163,0.228497025219458,0,0,0,0.140271639780637,0,0,0.156998727841375,0,0,0.166845105716094,1.17935397067922,1.34917267430912,0.811440485554012,1.4470629585145,0.763877555344259,0.575392274901621,22.3746612949549,0.823684239564244,0,1.86070473834252,0,0,0,0.482443521363367,0.369506380333209,0,0,0,0,0,0,1.17080188714679,0.157635144106191,0.664394068946325,0.159454768657487,0.327726629431476,0.172684981865896,0.723245292907558,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241251699712623,0.358117032009409,0,1.45740418314925,0,6.32222258952055,0.619160603889667,0.555583582109135,3.39063222608444,3.00727300986255,4.57556346413045,0,0,0,0,0.158167996790568,0,0,0,0,0,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0.209718688851422,0,0,1.58005560314089,0,0.308132871494482,0.129920822977795,0.895133478337407,1.19208812868759,0.841368146639782,1.32920574457119,0.807731599585181,1.143102099825,0.504130925684203,0.974578807397524,0.865906574762965,1.28564592399726,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.419226325255965,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0,0.661774257358546,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,2.79824751251259,0.315462165358238,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0.230615497256059,0,0,0,0,0,5.30766331169925,0.161766849947409,1.10420759230197,0.969750506270444,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,1.7416975885413,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,1.42358718463353,0,0,0.198956472041151,0,0.898819408654221,0.432276099749388,0.199141273254367,0.379335801906163,0.228497025219458,0,0,0,0.140271639780637,0,0,0.156998727841375,0,0,0.166845105716094,1.17935397067922,1.34917267430912,0.811440485554012,1.4470629585145,0.763877555344259,0.575392274901621,22.3746612949549,0.823684239564244,0,1.86070473834252,0,0,0,0.482443521363367,0.369506380333209,0,0,0,0,0,0,1.17080188714679,0.157635144106191,0.664394068946325,0.159454768657487,0.327726629431476,0.172684981865896,0.723245292907558,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241251699712623,0.358117032009409,0,1.45740418314925,0,6.32222258952055,0.619160603889667,0.555583582109135,3.39063222608444,3.00727300986255,4.57556346413045,0,0,0,0,0.158167996790568,0,0,0,0,0,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0.168956125490778,0.234714477291508,0,0.209718688851422,0,0,1.58005560314089,0,0.308132871494482,0.129920822977795,0.895133478337407,1.19208812868759,0.841368146639782,1.32920574457119,0.807731599585181,1.143102099825,0.504130925684203,0.974578807397524,0.865906574762965,1.28564592399726,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.419226325255965,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0,0.661774257358546,0.463735671240843 | ||
|short_description=p@chr4:135748823..135748835,+ | |short_description=p@chr4:135748823..135748835,+ | ||
}} | }} |
Latest revision as of 23:35, 4 August 2015
Short description: | p@chr4:135748823..135748835, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:135748823..135748835, + |
Coexpression cluster: | MCL_coexpression_mm9:261 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 1.80e-11 | 6 |
cavity lining | 1.80e-11 | 6 |
serous membrane | 1.80e-11 | 6 |
gastrointestinal system mesentery | 1.80e-11 | 6 |
stomach region | 1.80e-11 | 6 |
mesentery | 1.80e-11 | 6 |
gastrointestinal system serosa | 1.80e-11 | 6 |
mesentery of stomach | 1.80e-11 | 6 |
gut mesentery | 1.80e-11 | 6 |
dorsal mesentery | 1.80e-11 | 6 |
dorsal mesogastrium | 1.80e-11 | 6 |
peritoneal cavity | 1.80e-11 | 6 |
spleen primordium | 1.80e-11 | 6 |
intraembryonic coelom | 2.64e-10 | 10 |
hemopoietic organ | 1.04e-09 | 29 |
immune organ | 1.04e-09 | 29 |
foregut | 2.22e-08 | 80 |
subdivision of digestive tract | 5.82e-08 | 114 |
mixed endoderm/mesoderm-derived structure | 8.32e-08 | 35 |
digestive system | 9.09e-08 | 116 |
digestive tract | 9.09e-08 | 116 |
primitive gut | 9.09e-08 | 116 |
endoderm-derived structure | 1.40e-07 | 118 |
endoderm | 1.40e-07 | 118 |
presumptive endoderm | 1.40e-07 | 118 |
hematopoietic system | 3.29e-07 | 45 |
blood island | 3.29e-07 | 45 |