FFCP PHASE1:Mm9::chr4:133899408..133899421,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=230810 | |EntrezGene=230810 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=219 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z5N1 | |UniProt=D3Z5N1 | ||
|association_with_transcript=27bp_to_ENSMUST00000105872_5end | |association_with_transcript=27bp_to_ENSMUST00000105872_5end | ||
|cluster_id=chr4:133899408..133899421,+ | |||
|description=CAGE_peak_9_at_Slc30a2_5end | |description=CAGE_peak_9_at_Slc30a2_5end | ||
|id=chr4:133899408..133899421,+ | |id=chr4:133899408..133899421,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.36e-10!9;CL:0002251!2.36e-10!9;CL:0000239!5.26e-10!6;CL:0000677!5.26e-10!6;CL:0000212!5.26e-10!6;CL:0000584!5.26e-10!6;CL:0000075!2.03e-08!7 | |ontology_enrichment_celltype=CL:0002563!2.36e-10!9;CL:0002251!2.36e-10!9;CL:0000239!5.26e-10!6;CL:0000677!5.26e-10!6;CL:0000212!5.26e-10!6;CL:0000584!5.26e-10!6;CL:0000075!2.03e-08!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.18e-19,3;CL:0000239,3.91e-16,6;CL:0000677,3.91e-16,6;CL:0000584,3.91e-16,6;CL:0000075,7.19e-14,7;CL:0000066,3.07e-11,25;CL:0002563,7.66e-11,9;CL:0002251,7.66e-11,9;CL:0000473,1.83e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.41e-19!15;UBERON:0001242!5.50e-16!13;UBERON:0000060!5.50e-16!13;UBERON:0001262!5.50e-16!13;UBERON:0004786!5.50e-16!13;UBERON:0000160!2.14e-15!43;UBERON:0004923!5.31e-14!24;UBERON:0003350!2.36e-10!9;UBERON:0004808!2.36e-10!9;UBERON:0001277!2.36e-10!9;UBERON:0005409!2.29e-09!59;UBERON:0000485!3.76e-08!11;UBERON:0003064!7.54e-08!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.90e-31,15;UBERON:0002108,9.70e-24,4;UBERON:0004923,1.72e-23,24;UBERON:0001242,7.63e-22,13;UBERON:0001262,7.63e-22,13;UBERON:0004786,7.63e-22,13;UBERON:0000331,1.78e-18,3;UBERON:0002116,1.78e-18,3;UBERON:0001204,1.78e-18,3;UBERON:0001168,1.78e-18,3;UBERON:0000160,2.45e-14,31;UBERON:0001962,5.55e-13,2;UBERON:0001961,5.55e-13,2;UBERON:0001744,5.55e-13,2;UBERON:0003350,7.66e-11,9;UBERON:0004808,7.66e-11,9;UBERON:0001277,7.66e-11,9;UBERON:0005409,4.13e-09,47;UBERON:0002465,5.92e-09,3;UBERON:0000485,6.58e-09,11;UBERON:0003199,2.11e-07,1;UBERON:0000305,7.23e-07,1 | |||
|phase1_expression=0,4.53668029931169,7.73498706962211,0.30246421130683,0.500895729946347,1.84667199103079,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,5.50582274561208,6.89078356938024,7.32295393470427,4.74036711908956,2.85035129184561,1.76421090831952,9.09095093686749,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.452167921657868,0.117588707135705,0.502666365318702,1.73036477414062,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.58670339998127,0,0,0,0,0,0.760902504450237,0.474529061544512,0.494096864172033,0.754005626400808,0.994782360205754,0.38992817423824,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.42366414172764,0.882113592219848,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.330916980914195,0,0,0,0,0.39061315453185,0.209718688851422,0,0.576060012515731,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0.116876902181569,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,4.53668029931169,7.73498706962211,0.30246421130683,0.500895729946347,1.84667199103079,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67982572424835,5.50582274561208,6.89078356938024,7.32295393470427,4.74036711908956,2.85035129184561,1.76421090831952,9.09095093686749,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0.230615497256059,0.452167921657868,0.117588707135705,0.502666365318702,1.73036477414062,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.58670339998127,0,0,0,0,0,0.760902504450237,0.474529061544512,0.494096864172033,0.754005626400808,0.994782360205754,0.38992817423824,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0.983528546038072,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.42366414172764,0.882113592219848,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.330916980914195,0,0,0,0,0.39061315453185,0.209718688851422,0,0.576060012515731,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0.116876902181569,0,0.221985953374065,0,0.167884616364078,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0.476293691283074,0,0,0,0,0,0.177475806159338,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p9@Slc30a2 | |short_description=p9@Slc30a2 | ||
}} | }} |
Latest revision as of 12:10, 26 September 2015
Short description: | p9@Slc30a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Slc30a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:219 |
Association with transcript: | 27bp_to_ENSMUST00000105872_5end |
EntrezGene: | Slc30a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 5.18e-19 | 3 |
brush border epithelial cell | 3.91e-16 | 6 |
gut absorptive cell | 3.91e-16 | 6 |
enterocyte | 3.91e-16 | 6 |
columnar/cuboidal epithelial cell | 7.19e-14 | 7 |
epithelial cell | 3.07e-11 | 25 |
intestinal epithelial cell | 7.66e-11 | 9 |
epithelial cell of alimentary canal | 7.66e-11 | 9 |
defensive cell | 1.83e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.90e-31 | 15 |
small intestine | 9.70e-24 | 4 |
organ component layer | 1.72e-23 | 24 |
intestinal mucosa | 7.63e-22 | 13 |
wall of intestine | 7.63e-22 | 13 |
gastrointestinal system mucosa | 7.63e-22 | 13 |
ileal mucosa | 1.78e-18 | 3 |
ileum | 1.78e-18 | 3 |
mucosa of small intestine | 1.78e-18 | 3 |
wall of small intestine | 1.78e-18 | 3 |
intestine | 2.45e-14 | 31 |
gut-associated lymphoid tissue | 5.55e-13 | 2 |
mucosa-associated lymphoid tissue | 5.55e-13 | 2 |
lymphoid tissue | 5.55e-13 | 2 |
epithelium of mucosa | 7.66e-11 | 9 |
gastrointestinal system epithelium | 7.66e-11 | 9 |
intestinal epithelium | 7.66e-11 | 9 |
gastrointestinal system | 4.13e-09 | 47 |
lymphoid system | 5.92e-09 | 3 |
simple columnar epithelium | 6.58e-09 | 11 |
egg chamber | 2.11e-07 | 1 |
amnion | 7.23e-07 | 1 |