FFCP PHASE1:Mm9::chr6:48720822..48720829,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=83408 | |EntrezGene=83408 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=21 | |||
|TSSclassifier=NA | |||
|UniProt=Q99MI6 | |UniProt=Q99MI6 | ||
|association_with_transcript=20bp_to_NM_031247,uc009bvt.1_5end | |association_with_transcript=20bp_to_NM_031247,uc009bvt.1_5end | ||
|cluster_id=chr6:48720822..48720829,- | |||
|description=CAGE_peak_4_at_Gimap3_5end | |description=CAGE_peak_4_at_Gimap3_5end | ||
|id=chr6:48720822..48720829,- | |id=chr6:48720822..48720829,- | ||
|ontology_enrichment_celltype=CL:0000791!1.53e-17!9;CL:0000789!1.53e-17!9;CL:0002420!1.53e-17!9;CL:0002419!1.53e-17!9;CL:0000790!1.53e-17!9;CL:0000624!8.70e-16!8;CL:0000838!1.53e-15!12;CL:0000542!3.85e-14!13;CL:0000051!3.85e-14!13;CL:0000084!6.26e-14!11;CL:0000827!6.26e-14!11;CL:0002031!1.43e-12!25;CL:0000893!3.95e-12!6;CL:0002489!3.95e-12!6;CL:0000898!3.95e-12!6;CL:0000809!3.95e-12!6;CL:0000810!3.95e-12!6;CL:0000895!3.95e-12!6;CL:0000808!3.95e-12!6;CL:0000894!3.95e-12!6;CL:0000806!3.95e-12!6;CL:0000807!3.95e-12!6;CL:0000805!3.95e-12!6;CL:0002425!3.95e-12!6;CL:0002436!3.95e-12!6;CL:0002427!3.95e-12!6;CL:0002428!3.95e-12!6;CL:0002429!3.95e-12!6;CL:0002433!3.95e-12!6;CL:0002431!3.95e-12!6;CL:0002432!3.95e-12!6;CL:0000738!3.38e-10!17;CL:0002087!3.38e-10!17;CL:0000988!5.59e-09!32;CL:0002032!5.59e-09!32;CL:0000037!5.59e-09!32;CL:0000566!5.59e-09!32;CL:0000837!5.59e-09!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.71e-57,9;CL:0000789,6.71e-57,9;CL:0002420,6.71e-57,9;CL:0002419,6.71e-57,9;CL:0000790,6.71e-57,9;CL:0000838,4.33e-52,12;CL:0000624,8.86e-51,8;CL:0000542,5.07e-48,13;CL:0000051,5.07e-48,13;CL:0000084,1.96e-46,11;CL:0000827,1.96e-46,11;CL:0000893,4.77e-38,6;CL:0002489,4.77e-38,6;CL:0000898,4.77e-38,6;CL:0000809,4.77e-38,6;CL:0000810,4.77e-38,6;CL:0000895,4.77e-38,6;CL:0000808,4.77e-38,6;CL:0000894,4.77e-38,6;CL:0000806,4.77e-38,6;CL:0000807,4.77e-38,6;CL:0000805,4.77e-38,6;CL:0002425,4.77e-38,6;CL:0002436,4.77e-38,6;CL:0002427,4.77e-38,6;CL:0002428,4.77e-38,6;CL:0002429,4.77e-38,6;CL:0002433,4.77e-38,6;CL:0002431,4.77e-38,6;CL:0002432,4.77e-38,6;CL:0000738,1.60e-36,17;CL:0002087,1.60e-36,17;CL:0002031,2.77e-35,25;CL:0000988,2.54e-27,32;CL:0002032,2.54e-27,32;CL:0000037,2.54e-27,32;CL:0000837,2.54e-27,32;CL:0002320,1.22e-18,46;CL:0000134,1.22e-18,46;CL:0000219,1.08e-15,54;CL:0000723,9.37e-09,91;CL:0000048,9.37e-09,91;CL:0000034,4.01e-08,97;CL:0000815,4.65e-08,1;CL:0000792,4.65e-08,1;CL:0000625,1.14e-07,1;CL:0000945,2.74e-07,1;CL:0000236,2.74e-07,1;CL:0000826,2.74e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.87e-16!48;UBERON:0004177!1.06e-13!29;UBERON:0002390!2.15e-12!45;UBERON:0003061!2.15e-12!45;UBERON:0002370!3.32e-10!23;UBERON:0000974!3.32e-10!23;UBERON:0004807!3.32e-10!23;UBERON:0005058!3.32e-10!23;UBERON:0003351!3.32e-10!23;UBERON:0009113!3.32e-10!23;UBERON:0003295!3.32e-10!23;UBERON:0009722!3.32e-10!23;UBERON:0005562!3.32e-10!23;UBERON:0007690!3.32e-10!23;UBERON:0006562!1.20e-09!24;UBERON:0003408!1.20e-09!24;UBERON:0001557!1.20e-09!24;UBERON:0001042!1.20e-09!24;UBERON:0008814!1.20e-09!24;UBERON:0009145!1.20e-09!24;UBERON:0002405!8.53e-09!70;UBERON:0000072!3.19e-08!27;UBERON:0000065!4.49e-08!41;UBERON:0001004!8.77e-08!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.22e-18,46;UBERON:0002193,9.04e-10,48;UBERON:0002405,9.04e-10,48;UBERON:0002370,9.59e-10,23;UBERON:0000974,9.59e-10,23;UBERON:0004807,9.59e-10,23;UBERON:0005058,9.59e-10,23;UBERON:0003351,9.59e-10,23;UBERON:0009113,9.59e-10,23;UBERON:0003295,9.59e-10,23;UBERON:0009722,9.59e-10,23;UBERON:0005562,9.59e-10,23;UBERON:0007690,9.59e-10,23;UBERON:0006562,2.52e-09,24;UBERON:0003408,2.52e-09,24;UBERON:0001557,2.52e-09,24;UBERON:0001042,2.52e-09,24;UBERON:0008814,2.52e-09,24;UBERON:0009145,2.52e-09,24;UBERON:0002390,2.84e-08,45;UBERON:0003061,2.84e-08,45;UBERON:0000072,3.00e-08,27;UBERON:0004177,1.18e-07,29;UBERON:0005057,1.18e-07,29;UBERON:0000029,1.33e-07,1;UBERON:0001097,1.33e-07,1;UBERON:0003968,1.33e-07,1;UBERON:0001467,1.33e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,26.9867745992894,8.4473233291,6.55380673701582,1.71217968225505,2.15384829287408,10.9568467155972,16.7847172644475,0,0.404950534779652,0,2.36596624018678,1.50825876966313,0.84877930359606,0.255129870453209,0,0,0.47997726838022,0.91763712426868,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,10.1550699881588,5.04140698713696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.58937883647172,0.445326417194474,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.683483523191411,0,0,0.376736914009382,0.410082683163076,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.487289403698762,0.577271049841977,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,26.9867745992894,8.4473233291,6.55380673701582,1.71217968225505,2.15384829287408,10.9568467155972,16.7847172644475,0,0.404950534779652,0,2.36596624018678,1.50825876966313,0.84877930359606,0.255129870453209,0,0,0.47997726838022,0.91763712426868,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,10.1550699881588,5.04140698713696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.58937883647172,0.445326417194474,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0.210289948564127,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,1.32745138339963,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.683483523191411,0,0,0.376736914009382,0.410082683163076,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.487289403698762,0.577271049841977,0.701261413089414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@Gimap3 | |short_description=p4@Gimap3 | ||
}} | }} |
Latest revision as of 07:54, 27 September 2015
Short description: | p4@Gimap3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gimap3_5end |
Coexpression cluster: | MCL_coexpression_mm9:21 |
Association with transcript: | 20bp_to_NM_031247, uc009bvt.1_5end |
EntrezGene: | Gimap3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.22e-18 | 46 |
hemolymphoid system | 9.04e-10 | 48 |
immune system | 9.04e-10 | 48 |
thymus | 9.59e-10 | 23 |
neck | 9.59e-10 | 23 |
respiratory system epithelium | 9.59e-10 | 23 |
hemolymphoid system gland | 9.59e-10 | 23 |
pharyngeal epithelium | 9.59e-10 | 23 |
thymic region | 9.59e-10 | 23 |
pharyngeal gland | 9.59e-10 | 23 |
entire pharyngeal arch endoderm | 9.59e-10 | 23 |
thymus primordium | 9.59e-10 | 23 |
early pharyngeal endoderm | 9.59e-10 | 23 |
pharynx | 2.52e-09 | 24 |
gland of gut | 2.52e-09 | 24 |
upper respiratory tract | 2.52e-09 | 24 |
chordate pharynx | 2.52e-09 | 24 |
pharyngeal arch system | 2.52e-09 | 24 |
pharyngeal region of foregut | 2.52e-09 | 24 |
hematopoietic system | 2.84e-08 | 45 |
blood island | 2.84e-08 | 45 |
segment of respiratory tract | 3.00e-08 | 27 |
hemopoietic organ | 1.18e-07 | 29 |
immune organ | 1.18e-07 | 29 |
lymph node | 1.33e-07 | 1 |
axillary lymph node | 1.33e-07 | 1 |
peripheral lymph node | 1.33e-07 | 1 |
shoulder | 1.33e-07 | 1 |