FFCP PHASE1:Mm9::chr6:40718586..40718606,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=828 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:40718586..40718606,+ | |||
|description=CAGE_peak_at_chr6:40718586..40718606,+ | |description=CAGE_peak_at_chr6:40718586..40718606,+ | ||
|id=chr6:40718586..40718606,+ | |id=chr6:40718586..40718606,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.65e-10!25;CL:0002563!2.75e-09!9;CL:0002251!2.75e-09!9;CL:0000239!6.46e-09!6;CL:0000677!6.46e-09!6;CL:0000212!6.46e-09!6;CL:0000584!6.46e-09!6;CL:0000223!6.65e-08!20;CL:0000075!1.70e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,8.39e-11,3;CL:0000066,2.92e-09,25;CL:0000239,8.00e-09,6;CL:0000677,8.00e-09,6;CL:0000584,8.00e-09,6;CL:0000075,1.40e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.33e-21!43;UBERON:0000344!1.40e-17!15;UBERON:0005409!1.50e-16!59;UBERON:0001242!8.16e-15!13;UBERON:0000060!8.16e-15!13;UBERON:0001262!8.16e-15!13;UBERON:0004786!8.16e-15!13;UBERON:0004923!2.80e-12!24;UBERON:0004119!8.20e-12!130;UBERON:0000925!8.20e-12!130;UBERON:0006595!8.20e-12!130;UBERON:0001007!2.03e-11!128;UBERON:0001555!2.03e-11!128;UBERON:0007026!2.03e-11!128;UBERON:0004921!5.37e-10!126;UBERON:0004185!5.37e-10!126;UBERON:0003350!2.75e-09!9;UBERON:0004808!2.75e-09!9;UBERON:0001277!2.75e-09!9;UBERON:0000485!2.70e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.58e-26,31;UBERON:0000344,5.07e-21,15;UBERON:0005409,3.39e-16,47;UBERON:0001242,1.37e-15,13;UBERON:0001262,1.37e-15,13;UBERON:0004786,1.37e-15,13;UBERON:0002108,1.04e-14,4;UBERON:0004923,1.66e-12,24;UBERON:0000331,3.54e-11,3;UBERON:0002116,3.54e-11,3;UBERON:0001204,3.54e-11,3;UBERON:0001168,3.54e-11,3;UBERON:0001007,1.25e-10,116;UBERON:0001555,1.25e-10,116;UBERON:0007026,1.25e-10,116;UBERON:0004119,2.23e-10,118;UBERON:0000925,2.23e-10,118;UBERON:0006595,2.23e-10,118;UBERON:0004921,1.60e-08,114;UBERON:0001962,7.01e-08,2;UBERON:0001961,7.01e-08,2;UBERON:0001744,7.01e-08,2 | |||
|phase1_expression=0,1.04692622291808,1.81999695755814,1.51232105653415,1.50268718983904,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83981814704176,3.44113921600755,4.01962374880514,1.29228598847722,3.44753972297422,8.93110071444957,3.78045194639896,2.21730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0.418531630736908,0,0,0.588231488031014,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,1.07940638327563,0.649776417447669,1.79210754838934,0,0,0,0,0,0,0,0,0,0,0,3.76806803072898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,5.28901133327089,0,0.232236671860439,0,0,0.667134131534611,0.570676878337677,9.49058123089023,0.494096864172033,1.25667604400135,0.994782360205754,0.58489226135736,10.7858329038507,18.8040103390984,10.7536287557358,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.738050739898011,0.31399745568275,0,0,0,0,0,0,0.241177159752417,0,0,0,0.549122826376163,12.9391385874619,0,0.312037673114561,0,1.07638448113147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,13.699599321603,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.648074866458964,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.192075457214608,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0,0,0,0.135804113845862,0,0,0.29551344712669,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,1.81999695755814,1.51232105653415,1.50268718983904,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83981814704176,3.44113921600755,4.01962374880514,1.29228598847722,3.44753972297422,8.93110071444957,3.78045194639896,2.21730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0.418531630736908,0,0,0.588231488031014,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,1.07940638327563,0.649776417447669,1.79210754838934,0,0,0,0,0,0,0,0,0,0,0,3.76806803072898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95628174475697,5.28901133327089,0,0.232236671860439,0,0,0.667134131534611,0.570676878337677,9.49058123089023,0.494096864172033,1.25667604400135,0.994782360205754,0.58489226135736,10.7858329038507,18.8040103390984,10.7536287557358,0,0,0,0,0,0.0701358198903186,0.126473074248515,0.738050739898011,0.31399745568275,0,0,0,0,0,0,0.241177159752417,0,0,0,0.549122826376163,12.9391385874619,0,0.312037673114561,0,1.07638448113147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,13.699599321603,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0.648074866458964,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0,0,0.192075457214608,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0,0,0,0,0,0,0.135804113845862,0,0,0.29551344712669,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:40718586..40718606,+ | |short_description=p@chr6:40718586..40718606,+ | ||
}} | }} |
Latest revision as of 16:56, 5 August 2015
Short description: | p@chr6:40718586..40718606, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:40718586..40718606, + |
Coexpression cluster: | MCL_coexpression_mm9:828 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 8.39e-11 | 3 |
epithelial cell | 2.92e-09 | 25 |
brush border epithelial cell | 8.00e-09 | 6 |
gut absorptive cell | 8.00e-09 | 6 |
enterocyte | 8.00e-09 | 6 |
columnar/cuboidal epithelial cell | 1.40e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.58e-26 | 31 |
mucosa | 5.07e-21 | 15 |
gastrointestinal system | 3.39e-16 | 47 |
intestinal mucosa | 1.37e-15 | 13 |
wall of intestine | 1.37e-15 | 13 |
gastrointestinal system mucosa | 1.37e-15 | 13 |
small intestine | 1.04e-14 | 4 |
organ component layer | 1.66e-12 | 24 |
ileal mucosa | 3.54e-11 | 3 |
ileum | 3.54e-11 | 3 |
mucosa of small intestine | 3.54e-11 | 3 |
wall of small intestine | 3.54e-11 | 3 |
digestive system | 1.25e-10 | 116 |
digestive tract | 1.25e-10 | 116 |
primitive gut | 1.25e-10 | 116 |
endoderm-derived structure | 2.23e-10 | 118 |
endoderm | 2.23e-10 | 118 |
presumptive endoderm | 2.23e-10 | 118 |
subdivision of digestive tract | 1.60e-08 | 114 |
gut-associated lymphoid tissue | 7.01e-08 | 2 |
mucosa-associated lymphoid tissue | 7.01e-08 | 2 |
lymphoid tissue | 7.01e-08 | 2 |