Personal tools

FFCP PHASE1:Mm9::chr13:97694659..97694685,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=218476
|EntrezGene=218476
|HGNC=
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=E9Q649
|UniProt=E9Q649
|association_with_transcript=15bp_to_ENSMUST00000171324,NM_001166065,uc007rno.2_5end
|association_with_transcript=15bp_to_ENSMUST00000171324,NM_001166065,uc007rno.2_5end
|cluster_id=chr13:97694659..97694685,+
|description=CAGE_peak_1_at_Gcnt4_5end
|description=CAGE_peak_1_at_Gcnt4_5end
|id=chr13:97694659..97694685,+
|id=chr13:97694659..97694685,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,3.47e-08,9;CL:0002251,3.47e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!1.46e-10!15;UBERON:0000160!2.33e-10!43;UBERON:0001242!3.21e-09!13;UBERON:0000060!3.21e-09!13;UBERON:0001262!3.21e-09!13;UBERON:0004786!3.21e-09!13;UBERON:0005409!1.82e-07!59
|ontology_enrichment_uberon=UBERON:0000344!1.46e-10!15;UBERON:0000160!2.33e-10!43;UBERON:0001242!3.21e-09!13;UBERON:0000060!3.21e-09!13;UBERON:0001262!3.21e-09!13;UBERON:0004786!3.21e-09!13;UBERON:0005409!1.82e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.37e-20,31;UBERON:0005409,2.42e-13,47;UBERON:0000344,3.34e-13,15;UBERON:0001242,1.82e-11,13;UBERON:0001262,1.82e-11,13;UBERON:0004786,1.82e-11,13;UBERON:0003350,3.47e-08,9;UBERON:0004808,3.47e-08,9;UBERON:0001277,3.47e-08,9;UBERON:0004923,6.75e-08,24;UBERON:0002021,6.67e-07,10;UBERON:0000411,6.67e-07,10;UBERON:0001950,6.67e-07,10
|phase1_expression=0.320297694209588,77.1235650882988,82.354862329506,48.3942738090928,48.5868858047957,31.8970616632591,26.8654536684855,0,0.281577444303333,0.936258105287974,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,42.5579844630462,57.8111388289268,58.5716603397321,71.9372533585655,43.3097177698637,33.0640749854091,48.6418150436666,30.8205409810874,0,0,0,3.75507105676657,4.82080471539628,4.49172583777212,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.734187008646726,0,1.09012578190223,0.219686182734472,0.388859798148567,0.979904951377538,2.87505128729943,0,0,0,0.771778308107841,2.0057340795713,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,2.03306719241479,1.77858959222228,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0.662605622854841,0,0,0,1.10115880999389,1.65993539510744,1.84327839907492,0,0,0.52091337055676,0.837548997004143,1.12552522006336,0.61119299110724,0.294628585473668,0.427115042397309,0,0.908714319998209,1.43585964202892,0.289864488701678,0.860423876981386,0,3.77792234146472,4.54843492213368,4.03224198387602,1.82577746171277,1.1930122580464,0.519572009205738,0.35333957451034,0.14084341977668,0,0,0,0.865964164044856,0.253359865475099,0,6.50848114398642,0.517875767294343,0,0.520455980298408,0.608930956624282,0.230615497256059,0.301445281105245,0.352766121407114,0.376999773989026,3.95511948374998,0.144599356919912,0.884610551949874,0.161766849947409,0.662524555381181,0.969750506270444,5.59175283654366,0,0.209446706813455,21.7138496927303,0.599075622529601,1.19980546198682,0.127070227073065,1.19832511523858,2.74500361691176,0,4.17178368461463,4.34716277461562,0.41557608911912,1.94689515681309,0.712875546952214,8.8328949133166,34.8757406638471,0.210441855886474,1.56144531555244,2.06911893990126,1.62055916824814,1.9591626318643,1.63287597963187,1.40925092313335,1.68663104207512,1.81092359517311,0.862271971731369,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.796137067273973,0.702213187313235,0.51469581422943,0,0,0.469052119962192,0.36012412292203,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0.0810688095458557,0,0,0.268412837520744,0,0.205809224758569,22.4684772428983,16.6603856998033,0,0,1.67527699718721,6.25218926332362,9.33987784148455,13.6962450801043,14.7104009078799,21.2461651593974,19.1014758688205,9.94782360205754,10.5280607044325,20.6728463990471,18.371734239349,17.922714592893,0.189667900953082,0.913988100877831,3.38123207019241,1.4255592949172,0.969762435838129,2.17421041659988,1.89709611372772,0.442830443938806,1.41298855057237,1.72756029490521,3.85388415213294,0.333690211432188,0.589676985339609,2.02375901146368,1.42002084971952,1.4470629585145,2.29163266603278,2.30156909960649,1.78348749452539,2.74561413188081,2.87536413054709,2.60498663367952,2.80833905803104,3.78868316920668,1.4351793081753,2.8946611281802,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.476087281772027,0.585400943573396,0.157635144106191,0,0,0,0,0,0,0,0,0.275936746304732,1.28440471990234,1.52375192569864,8.19674726883377,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,1.21443210502468,1.75353514746787,0.790575555893047,2.57057053137446,4.40014264145633,0.35613120733451,0.81443479676788,0.659880491890142,0,0.485561272309963,0.604647113929502,1.13163047853539,0,0.307435147943927,5.94385074286909,1.09060118843252,1.06949213515416,0.632073515871632,0,0,0.340439605753788,0.720244376125241,0,0,0.532020700926821,0.178368817602071,0,0.304464949114599,0.938686832254841,4.44847348814022,0,2.14352128823924,0.484393280087717,0.663442174209714,0.954978752025092,1.47726809770555,16.0314460146418,1.66882771809459,0,0.82554747185289,0.555583582109135,0,0,0,0.849892149969277,0.69975726161829,1.38199973804424,0.954670618015114,0,0.406638934253697,2.59212817972323,0.836353184057875,2.18362563746178,1.34864346384821,2.56225712748541,0,2.46268449254406,0,1.12738587736838,0.598066184175915,0.496375471371293,0.388902376688095,1.03327858782185,2.02747350588934,1.17357238645754,1.43224823328345,5.55754525456268,4.1069300540421,1.44015003128933,0.632022241256357,0.810900861160657,0.513554785824136,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.590758108698309,0.302899349844443,0.228620419965,0.201652370273681,0.292373642219257,0.288635524920988,0.350630706544707,0,2.66383144048878,1.43542170575161,0.335769232728157,0.19318959403219,1.50145980360946,0,0,0,2.25900737046827,3.22227665555024,3.43737308063638,4.1244763762485,6.85082519770642,6.0431511791176,4.05013500139084,6.75481804836331,4.53142408984205,8.80192529978094,0.103787347584177,0,0.170733605754134,0.972426868273176,0.419226325255965,0.919217542250071,0.666740183404846,0.412070114477788,1.92551525755089,0.758091635291392,1.01391719956096,1.32038438970253,0.842773567228942,0.960377286073039,1.09127391015665,1.90517476513229,1.39061191133827,0.964546102318525,1.23625770240992,1.03039244094078,0.685738504770831,0.70990322463735,1.1921809497366,1.0174249164263,1.59985946706062,0.676916863133412,0.914639864363863,0.789209134313529,1.49384525230448,0.561142271657738,1.77952527186261,0.591026894253381,1.63692417267876,1.23949472948773,1.54325288784913,0.249810577937946,1.16965804222704,1.93383948643468,0.191288332068843,0.882365676478062,0.231867835620421
|phase1_expression=0.320297694209588,77.1235650882988,82.354862329506,48.3942738090928,48.5868858047957,31.8970616632591,26.8654536684855,0,0.281577444303333,0.936258105287974,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,42.5579844630462,57.8111388289268,58.5716603397321,71.9372533585655,43.3097177698637,33.0640749854091,48.6418150436666,30.8205409810874,0,0,0,3.75507105676657,4.82080471539628,4.49172583777212,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.734187008646726,0,1.09012578190223,0.219686182734472,0.388859798148567,0.979904951377538,2.87505128729943,0,0,0,0.771778308107841,2.0057340795713,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,2.03306719241479,1.77858959222228,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0.662605622854841,0,0,0,1.10115880999389,1.65993539510744,1.84327839907492,0,0,0.52091337055676,0.837548997004143,1.12552522006336,0.61119299110724,0.294628585473668,0.427115042397309,0,0.908714319998209,1.43585964202892,0.289864488701678,0.860423876981386,0,3.77792234146472,4.54843492213368,4.03224198387602,1.82577746171277,1.1930122580464,0.519572009205738,0.35333957451034,0.14084341977668,0,0,0,0.865964164044856,0.253359865475099,0,6.50848114398642,0.517875767294343,0,0.520455980298408,0.608930956624282,0.230615497256059,0.301445281105245,0.352766121407114,0.376999773989026,3.95511948374998,0.144599356919912,0.884610551949874,0.161766849947409,0.662524555381181,0.969750506270444,5.59175283654366,0,0.209446706813455,21.7138496927303,0.599075622529601,1.19980546198682,0.127070227073065,1.19832511523858,2.74500361691176,0,4.17178368461463,4.34716277461562,0.41557608911912,1.94689515681309,0.712875546952214,8.8328949133166,34.8757406638471,0.210441855886474,1.56144531555244,2.06911893990126,1.62055916824814,1.9591626318643,1.63287597963187,1.40925092313335,1.68663104207512,1.81092359517311,0.862271971731369,0,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.796137067273973,0.702213187313235,0.51469581422943,0,0,0.469052119962192,0.36012412292203,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0.0810688095458557,0,0,0.268412837520744,0,0.205809224758569,22.4684772428983,16.6603856998033,0,0,1.67527699718721,6.25218926332362,9.33987784148455,13.6962450801043,14.7104009078799,21.2461651593974,19.1014758688205,9.94782360205754,10.5280607044325,20.6728463990471,18.371734239349,17.922714592893,0.189667900953082,0.913988100877831,3.38123207019241,1.4255592949172,0.969762435838129,2.17421041659988,1.89709611372772,0.442830443938806,1.41298855057237,1.72756029490521,3.85388415213294,0.333690211432188,0.589676985339609,2.02375901146368,1.42002084971952,1.4470629585145,2.29163266603278,2.30156909960649,1.78348749452539,2.74561413188081,2.87536413054709,2.60498663367952,2.80833905803104,3.78868316920668,1.4351793081753,2.8946611281802,0,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.476087281772027,0.585400943573396,0.157635144106191,0,0,0,0,0,0,0,0,0.275936746304732,1.28440471990234,1.52375192569864,8.19674726883377,0.252470927204373,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,1.21443210502468,1.75353514746787,0.790575555893047,2.57057053137446,4.40014264145633,0.35613120733451,0.81443479676788,0.659880491890142,0,0.485561272309963,0.604647113929502,1.13163047853539,0,0.307435147943927,5.94385074286909,1.09060118843252,1.06949213515416,0.632073515871632,0,0,0.340439605753788,0.720244376125241,0,0,0.532020700926821,0.178368817602071,0,0.304464949114599,0.938686832254841,4.44847348814022,0,2.14352128823924,0.484393280087717,0.663442174209714,0.954978752025092,1.47726809770555,16.0314460146418,1.66882771809459,0,0.82554747185289,0.555583582109135,0,0,0,0.849892149969277,0.69975726161829,1.38199973804424,0.954670618015114,0,0.406638934253697,2.59212817972323,0.836353184057875,2.18362563746178,1.34864346384821,2.56225712748541,0,2.46268449254406,0,1.12738587736838,0.598066184175915,0.496375471371293,0.388902376688095,1.03327858782185,2.02747350588934,1.17357238645754,1.43224823328345,5.55754525456268,4.1069300540421,1.44015003128933,0.632022241256357,0.810900861160657,0.513554785824136,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.590758108698309,0.302899349844443,0.228620419965,0.201652370273681,0.292373642219257,0.288635524920988,0.350630706544707,0,2.66383144048878,1.43542170575161,0.335769232728157,0.19318959403219,1.50145980360946,0,0,0,2.25900737046827,3.22227665555024,3.43737308063638,4.1244763762485,6.85082519770642,6.0431511791176,4.05013500139084,6.75481804836331,4.53142408984205,8.80192529978094,0.103787347584177,0,0.170733605754134,0.972426868273176,0.419226325255965,0.919217542250071,0.666740183404846,0.412070114477788,1.92551525755089,0.758091635291392,1.01391719956096,1.32038438970253,0.842773567228942,0.960377286073039,1.09127391015665,1.90517476513229,1.39061191133827,0.964546102318525,1.23625770240992,1.03039244094078,0.685738504770831,0.70990322463735,1.1921809497366,1.0174249164263,1.59985946706062,0.676916863133412,0.914639864363863,0.789209134313529,1.49384525230448,0.561142271657738,1.77952527186261,0.591026894253381,1.63692417267876,1.23949472948773,1.54325288784913,0.249810577937946,1.16965804222704,1.93383948643468,0.191288332068843,0.882365676478062,0.231867835620421
|short_description=p1@Gcnt4
|short_description=p1@Gcnt4
}}
}}

Latest revision as of 14:10, 25 September 2015

Short description:p1@Gcnt4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gcnt4_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 15bp_to_ENSMUST00000171324, NM_001166065, uc007rno.2_5end
EntrezGene:Gcnt4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gcnt4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I577.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I682.35
CD326+ enterocyte, pool1.CNhs13542.11848-124I348.39
CD326+ enterocyte, pool2.CNhs13197.11849-124I448.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I731.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I826.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D142.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D257.81
GP2+ M cell, pool1.CNhs13228.11845-124H958.57
GP2+ M cell, pool2.CNhs13231.11846-124I171.94
GP2+ M cell, pool3.CNhs13240.11847-124I243.31
Ileum epithelium, pool1.CNhs13199.10252-104B933.06
Ileum epithelium, pool2.CNhs13232.10253-104C148.64
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C830.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.91
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.51
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H721.71
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.83
epididymis, adult.CNhs10490.58-23B234.88
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I322.47
intestine, adult.CNhs10496.178-9A316.66
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H46.25
intestine, embryo E17.CNhs10582.482-18D39.34
intestine, embryo E18.CNhs10526.1289-20F713.70
intestine, neonate N00.CNhs11126.644-26D114.71
intestine, neonate N01.CNhs11192.1322-23E921.25
intestine, neonate N06.CNhs11102.688-20B819.10
intestine, neonate N07.CNhs11095.720-20F29.95
intestine, neonate N10.CNhs11098.755-23A510.53
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E318.37
intestine, neonate N30.CNhs11131.1384-42G117.92
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.20
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I74.40
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G95.94
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I116.03
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D42.59
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D95.56
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell3.47e-089
epithelial cell of alimentary canal3.47e-089

Uber anatomy
Ontology termp-valuen
intestine2.37e-2031
gastrointestinal system2.42e-1347
mucosa3.34e-1315
intestinal mucosa1.82e-1113
wall of intestine1.82e-1113
gastrointestinal system mucosa1.82e-1113
epithelium of mucosa3.47e-089
gastrointestinal system epithelium3.47e-089
intestinal epithelium3.47e-089
organ component layer6.75e-0824
occipital lobe6.67e-0710
visual cortex6.67e-0710
neocortex6.67e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:97694659..97694685,%2B&oldid=4195659"