FFCP PHASE1:Mm9::chr3:86350565..86350577,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=673 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:86350565..86350577,- | |||
|description=CAGE_peak_at_chr3:86350565..86350577,- | |description=CAGE_peak_at_chr3:86350565..86350577,- | ||
|id=chr3:86350565..86350577,- | |id=chr3:86350565..86350577,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,5.52e-12,3;CL:0000117,2.17e-09,23;CL:0000337,2.17e-09,23;CL:0002611,2.12e-08,2;CL:0000540,8.16e-08,33;CL:0000047,8.16e-08,33;CL:0000031,8.16e-08,33;CL:0000404,8.16e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.00e-09!9;UBERON:0000019!2.00e-09!9;UBERON:0000047!2.00e-09!9;UBERON:0004088!2.00e-09!9;UBERON:0002104!2.00e-09!9;UBERON:0001456!2.00e-09!9;UBERON:0003072!2.00e-09!9;UBERON:0003071!2.00e-09!9;UBERON:0004128!2.00e-09!9;UBERON:0000020!1.51e-07!12;UBERON:0001032!1.51e-07!12;UBERON:0004456!1.51e-07!12;UBERON:0002240!1.81e-07!6;UBERON:0005174!1.81e-07!6;UBERON:0001137!1.81e-07!6;UBERON:0001444!3.22e-07!11;UBERON:0005085!9.54e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,9.80e-19,5;UBERON:0002315,9.80e-19,5;UBERON:0002240,1.38e-15,6;UBERON:0005174,1.38e-15,6;UBERON:0001137,1.38e-15,6;UBERON:0002257,5.52e-12,3;UBERON:0000970,1.91e-10,9;UBERON:0000019,1.91e-10,9;UBERON:0000047,1.91e-10,9;UBERON:0010312,1.91e-10,9;UBERON:0004088,1.91e-10,9;UBERON:0002104,1.91e-10,9;UBERON:0001456,1.91e-10,9;UBERON:0003072,1.91e-10,9;UBERON:0004128,1.91e-10,9;UBERON:0003071,1.91e-10,9;UBERON:0001444,1.68e-08,11;UBERON:0002256,2.12e-08,2;UBERON:0000020,9.01e-08,12;UBERON:0001032,9.01e-08,12;UBERON:0004456,9.01e-08,12;UBERON:0003076,1.10e-07,12;UBERON:0003057,1.10e-07,12;UBERON:0000033,3.74e-07,13;UBERON:0005085,3.74e-07,13 | |||
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|short_description=p@chr3:86350565..86350577,- | |short_description=p@chr3:86350565..86350577,- | ||
}} | }} |
Latest revision as of 02:41, 4 August 2015
Short description: | p@chr3:86350565..86350577, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:86350565..86350577, - |
Coexpression cluster: | MCL_coexpression_mm9:673 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 5.52e-12 | 3 |
CNS neuron (sensu Vertebrata) | 2.17e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.17e-09 | 23 |
neuron of the dorsal spinal cord | 2.12e-08 | 2 |
neuron | 8.16e-08 | 33 |
neuronal stem cell | 8.16e-08 | 33 |
neuroblast | 8.16e-08 | 33 |
electrically signaling cell | 8.16e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 9.80e-19 | 5 |
gray matter of spinal cord | 9.80e-19 | 5 |
spinal cord | 1.38e-15 | 6 |
dorsal region element | 1.38e-15 | 6 |
dorsum | 1.38e-15 | 6 |
ventral horn of spinal cord | 5.52e-12 | 3 |
eye | 1.91e-10 | 9 |
camera-type eye | 1.91e-10 | 9 |
simple eye | 1.91e-10 | 9 |
immature eye | 1.91e-10 | 9 |
ocular region | 1.91e-10 | 9 |
visual system | 1.91e-10 | 9 |
face | 1.91e-10 | 9 |
optic cup | 1.91e-10 | 9 |
optic vesicle | 1.91e-10 | 9 |
eye primordium | 1.91e-10 | 9 |
subdivision of head | 1.68e-08 | 11 |
dorsal horn of spinal cord | 2.12e-08 | 2 |
sense organ | 9.01e-08 | 12 |
sensory system | 9.01e-08 | 12 |
entire sense organ system | 9.01e-08 | 12 |
posterior neural tube | 1.10e-07 | 12 |
chordal neural plate | 1.10e-07 | 12 |
head | 3.74e-07 | 13 |
ectodermal placode | 3.74e-07 | 13 |