FFCP PHASE1:Mm9::chr13:54802796..54802807,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=268663 | |EntrezGene=268663 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q7P9 | |UniProt=E9Q7P9 | ||
|association_with_transcript=-14bp_to_ENSMUST00000037145_5end | |association_with_transcript=-14bp_to_ENSMUST00000037145_5end | ||
|cluster_id=chr13:54802796..54802807,+ | |||
|description=CAGE_peak_2_at_Cdhr2_5end | |description=CAGE_peak_2_at_Cdhr2_5end | ||
|id=chr13:54802796..54802807,+ | |id=chr13:54802796..54802807,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.26e-08!9;CL:0002251!1.26e-08!9;CL:0000239!9.81e-07!6;CL:0000677!9.81e-07!6;CL:0000212!9.81e-07!6;CL:0000584!9.81e-07!6 | |ontology_enrichment_celltype=CL:0002563!1.26e-08!9;CL:0002251!1.26e-08!9;CL:0000239!9.81e-07!6;CL:0000677!9.81e-07!6;CL:0000212!9.81e-07!6;CL:0000584!9.81e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.70e-10,9;CL:0002251,1.70e-10,9;CL:0000239,4.13e-08,6;CL:0000677,4.13e-08,6;CL:0000584,4.13e-08,6;CL:0000075,9.64e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.85e-21!43;UBERON:0005409!2.38e-20!59;UBERON:0000344!7.77e-14!15;UBERON:0001242!3.59e-12!13;UBERON:0000060!3.59e-12!13;UBERON:0001262!3.59e-12!13;UBERON:0004786!3.59e-12!13;UBERON:0004119!1.02e-11!130;UBERON:0000925!1.02e-11!130;UBERON:0006595!1.02e-11!130;UBERON:0001007!3.69e-11!128;UBERON:0001555!3.69e-11!128;UBERON:0007026!3.69e-11!128;UBERON:0004921!4.28e-10!126;UBERON:0004185!4.28e-10!126;UBERON:0004923!2.53e-09!24;UBERON:0003350!1.26e-08!9;UBERON:0004808!1.26e-08!9;UBERON:0001277!1.26e-08!9 | |ontology_enrichment_uberon=UBERON:0000160!3.85e-21!43;UBERON:0005409!2.38e-20!59;UBERON:0000344!7.77e-14!15;UBERON:0001242!3.59e-12!13;UBERON:0000060!3.59e-12!13;UBERON:0001262!3.59e-12!13;UBERON:0004786!3.59e-12!13;UBERON:0004119!1.02e-11!130;UBERON:0000925!1.02e-11!130;UBERON:0006595!1.02e-11!130;UBERON:0001007!3.69e-11!128;UBERON:0001555!3.69e-11!128;UBERON:0007026!3.69e-11!128;UBERON:0004921!4.28e-10!126;UBERON:0004185!4.28e-10!126;UBERON:0004923!2.53e-09!24;UBERON:0003350!1.26e-08!9;UBERON:0004808!1.26e-08!9;UBERON:0001277!1.26e-08!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.36e-29,31;UBERON:0005409,2.05e-19,47;UBERON:0000344,4.40e-17,15;UBERON:0001242,5.62e-15,13;UBERON:0001262,5.62e-15,13;UBERON:0004786,5.62e-15,13;UBERON:0003350,1.70e-10,9;UBERON:0004808,1.70e-10,9;UBERON:0001277,1.70e-10,9;UBERON:0004923,3.52e-10,24;UBERON:0000485,4.19e-08,11;UBERON:0001007,5.01e-08,116;UBERON:0001555,5.01e-08,116;UBERON:0007026,5.01e-08,116;UBERON:0004119,1.11e-07,118;UBERON:0000925,1.11e-07,118;UBERON:0006595,1.11e-07,118;UBERON:0004921,5.20e-07,114 | |||
|phase1_expression=0,48.5075816618712,40.9499315450582,75.3135886154007,62.6119662432934,11.2479112180966,10.7461814673942,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,26.3987497609121,36.0172571275457,29.285830169866,30.1533397311352,24.1327780608196,56.8170024174558,36.7963989449499,17.9601713630797,0,0,0,5.19932915552294,5.98444723290572,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0.539703191637817,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,7.19358442230078,0,0,0.173485326766136,0,0.922461989024234,0.452167921657868,0,0.125666591329675,26.449861547578,0,0,0,0,0,37.2783522436244,0,0,31.4212177906567,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.683388605387,33.3207713996066,0,0,1.15980715189884,5.04208811558356,12.8979265430025,19.5932394895936,31.7934471234823,41.6688355451748,34.9355940232375,34.4194696631191,32.1690743746548,25.1669434423182,45.6051285235605,36.8411355520579,0.189667900953082,0.456994050438915,0,1.22190796707189,1.35766741017338,1.96380295692892,2.97211724484009,5.46157547524528,8.00693511991011,7.65062416315163,0,0.667380422864376,1.37591296579242,4.49724224769707,4.66578279193557,6.27060615356284,5.0925170356284,8.91858026097513,5.0261920300261,6.58947391651396,4.31304619582064,4.09355042435354,0.936113019343682,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,1.32023555829129,2.36241514304618,3.07435147943927,6.97756391554197,0.363533729477506,0,0,0,4.12542172992747,0,0,0,0,0,0,0,0,0.704015124191131,0.847328283455281,0,0,0,0,0,0.164140899745061,40.5158362915492,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.86404272657441,0.627264888043406,4.36725127492355,0.404593039154462,1.32245529160537,0.26175594198403,33.4406631092826,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0.838452650511929,0.551530525350042,2.00022055021454,1.64828045791115,0.64183841918363,1.26348605881899,2.78827229879264,1.88626341386076,1.68554713445788,0.89635213366817,1.14870937911227,1.90517476513229,1.73826488917283,1.73618298417335,1.64834360321323,1.03039244094078,1.02860775715625,0.70990322463735,1.90748951957857,2.0348498328526,1.31753132581463,1.09998990259179,2.0122077016005,1.57841826862706,1.62964936615034,1.68342681497322,1.06771516311757,1.47756723563345,1.22769312950907,1.70430525304563,1.15743966588685,0,1.40358965067245,2.14871054048298,0,0,0.231867835620421 | |phase1_expression=0,48.5075816618712,40.9499315450582,75.3135886154007,62.6119662432934,11.2479112180966,10.7461814673942,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,26.3987497609121,36.0172571275457,29.285830169866,30.1533397311352,24.1327780608196,56.8170024174558,36.7963989449499,17.9601713630797,0,0,0,5.19932915552294,5.98444723290572,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0.539703191637817,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,7.19358442230078,0,0,0.173485326766136,0,0.922461989024234,0.452167921657868,0,0.125666591329675,26.449861547578,0,0,0,0,0,37.2783522436244,0,0,31.4212177906567,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,73.683388605387,33.3207713996066,0,0,1.15980715189884,5.04208811558356,12.8979265430025,19.5932394895936,31.7934471234823,41.6688355451748,34.9355940232375,34.4194696631191,32.1690743746548,25.1669434423182,45.6051285235605,36.8411355520579,0.189667900953082,0.456994050438915,0,1.22190796707189,1.35766741017338,1.96380295692892,2.97211724484009,5.46157547524528,8.00693511991011,7.65062416315163,0,0.667380422864376,1.37591296579242,4.49724224769707,4.66578279193557,6.27060615356284,5.0925170356284,8.91858026097513,5.0261920300261,6.58947391651396,4.31304619582064,4.09355042435354,0.936113019343682,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,1.32023555829129,2.36241514304618,3.07435147943927,6.97756391554197,0.363533729477506,0,0,0,4.12542172992747,0,0,0,0,0,0,0,0,0.704015124191131,0.847328283455281,0,0,0,0,0,0.164140899745061,40.5158362915492,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,0.86404272657441,0.627264888043406,4.36725127492355,0.404593039154462,1.32245529160537,0.26175594198403,33.4406631092826,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0.838452650511929,0.551530525350042,2.00022055021454,1.64828045791115,0.64183841918363,1.26348605881899,2.78827229879264,1.88626341386076,1.68554713445788,0.89635213366817,1.14870937911227,1.90517476513229,1.73826488917283,1.73618298417335,1.64834360321323,1.03039244094078,1.02860775715625,0.70990322463735,1.90748951957857,2.0348498328526,1.31753132581463,1.09998990259179,2.0122077016005,1.57841826862706,1.62964936615034,1.68342681497322,1.06771516311757,1.47756723563345,1.22769312950907,1.70430525304563,1.15743966588685,0,1.40358965067245,2.14871054048298,0,0,0.231867835620421 | ||
|short_description=p2@Cdhr2 | |short_description=p2@Cdhr2 | ||
}} | }} |
Latest revision as of 18:16, 1 October 2015
Short description: | p2@Cdhr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cdhr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -14bp_to_ENSMUST00000037145_5end |
EntrezGene: | Cdhr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.70e-10 | 9 |
epithelial cell of alimentary canal | 1.70e-10 | 9 |
brush border epithelial cell | 4.13e-08 | 6 |
gut absorptive cell | 4.13e-08 | 6 |
enterocyte | 4.13e-08 | 6 |
columnar/cuboidal epithelial cell | 9.64e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.36e-29 | 31 |
gastrointestinal system | 2.05e-19 | 47 |
mucosa | 4.40e-17 | 15 |
intestinal mucosa | 5.62e-15 | 13 |
wall of intestine | 5.62e-15 | 13 |
gastrointestinal system mucosa | 5.62e-15 | 13 |
epithelium of mucosa | 1.70e-10 | 9 |
gastrointestinal system epithelium | 1.70e-10 | 9 |
intestinal epithelium | 1.70e-10 | 9 |
organ component layer | 3.52e-10 | 24 |
simple columnar epithelium | 4.19e-08 | 11 |
digestive system | 5.01e-08 | 116 |
digestive tract | 5.01e-08 | 116 |
primitive gut | 5.01e-08 | 116 |
endoderm-derived structure | 1.11e-07 | 118 |
endoderm | 1.11e-07 | 118 |
presumptive endoderm | 1.11e-07 | 118 |
subdivision of digestive tract | 5.20e-07 | 114 |