FFCP PHASE1:Mm9::chr12:40949951..40949969,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15982 | |EntrezGene=15982 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=P19182 | |UniProt=P19182 | ||
|association_with_transcript=-175bp_to_ENSMUST00000001672,NM_013562,uc007nky.2_5end | |association_with_transcript=-175bp_to_ENSMUST00000001672,NM_013562,uc007nky.2_5end | ||
|cluster_id=chr12:40949951..40949969,- | |||
|description=CAGE_peak_3_at_Ifrd1_5end | |description=CAGE_peak_3_at_Ifrd1_5end | ||
|id=chr12:40949951..40949969,- | |id=chr12:40949951..40949969,- | ||
|ontology_enrichment_celltype=CL:0002563!2.49e-10!9;CL:0002251!2.49e-10!9;CL:0000066!2.43e-09!25;CL:0002076!1.55e-08!15;CL:0000223!4.87e-08!20;CL:0000063!9.07e-08!66;CL:0000239!1.10e-07!6;CL:0000677!1.10e-07!6;CL:0000212!1.10e-07!6;CL:0000584!1.10e-07!6 | |ontology_enrichment_celltype=CL:0002563!2.49e-10!9;CL:0002251!2.49e-10!9;CL:0000066!2.43e-09!25;CL:0002076!1.55e-08!15;CL:0000223!4.87e-08!20;CL:0000063!9.07e-08!66;CL:0000239!1.10e-07!6;CL:0000677!1.10e-07!6;CL:0000212!1.10e-07!6;CL:0000584!1.10e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.27e-29,9;CL:0002251,5.27e-29,9;CL:0000066,2.01e-26,25;CL:0000239,1.54e-25,6;CL:0000677,1.54e-25,6;CL:0000584,1.54e-25,6;CL:0000075,7.96e-22,7;CL:0000223,1.96e-19,20;CL:0002076,5.53e-17,15;CL:0000682,1.02e-13,3;CL:0000791,4.52e-07,9;CL:0000789,4.52e-07,9;CL:0002420,4.52e-07,9;CL:0002419,4.52e-07,9;CL:0000790,4.52e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!2.49e-10!9;UBERON:0004808!2.49e-10!9;UBERON:0001277!2.49e-10!9;UBERON:0000344!4.32e-10!15;UBERON:0001242!6.10e-09!13;UBERON:0000060!6.10e-09!13;UBERON:0001262!6.10e-09!13;UBERON:0004786!6.10e-09!13;UBERON:0000485!7.31e-08!11 | |ontology_enrichment_uberon=UBERON:0003350!2.49e-10!9;UBERON:0004808!2.49e-10!9;UBERON:0001277!2.49e-10!9;UBERON:0000344!4.32e-10!15;UBERON:0001242!6.10e-09!13;UBERON:0000060!6.10e-09!13;UBERON:0001262!6.10e-09!13;UBERON:0004786!6.10e-09!13;UBERON:0000485!7.31e-08!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,5.27e-29,9;UBERON:0004808,5.27e-29,9;UBERON:0001277,5.27e-29,9;UBERON:0000485,1.52e-23,11;UBERON:0001242,9.23e-20,13;UBERON:0001262,9.23e-20,13;UBERON:0004786,9.23e-20,13;UBERON:0000344,5.53e-17,15;UBERON:0004923,3.35e-10,24;UBERON:0003929,7.74e-09,55;UBERON:0000490,2.54e-08,66;UBERON:0000160,1.21e-07,31 | |||
|phase1_expression=0,15.7038933437712,16.8349718574128,3.0246421130683,6.51164448930251,6.71517087647559,3.73780224952841,0.516493293766305,1.12630977721333,3.04283884218592,0.34243593645101,0,0.684802919724823,0.262261207256992,0,0.202475267389826,0,0,0,0,0.17008658030214,0.198581902401771,0,0.47997726838022,0.22940928106717,5.7423196411502,13.3536218809313,8.83432054012145,0.190023419456374,0,0,0,0,0,2.02196133825892,0.831173226792462,1.63335485009895,1.25559489221072,0.7813353445238,0,0.588231488031014,2.04913645487534,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0,1.43752564364972,0.167782606057736,1.45072428402269,1.00828139742739,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0.227178579999552,0.0755715601067855,4.05810284182349,0,2.03991400112325,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.23517741427141,0.125666591329675,0,0.433798070759735,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0.359445373517761,0,0.254140454146129,0,0.457500602818626,0,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0.257347907114715,0.284163499395593,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0.128867461322093,0,0,0,0.949058123089023,0,0,0,0,0.898819408654221,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0.516856586336442,0.363533729477506,0,0,0,1.03135543248187,0,0,0,0,0.354680467284547,0,0,0,0,0.21183207086382,0,0.32977250588296,2.74489525383039,0.542816324353403,0.477489376012546,0.656563598980245,0.291480836629851,0,0,0,0,0,0,0,0.169978429993855,0.419854356970974,0.138199973804424,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.179427713218951,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | |phase1_expression=0,15.7038933437712,16.8349718574128,3.0246421130683,6.51164448930251,6.71517087647559,3.73780224952841,0.516493293766305,1.12630977721333,3.04283884218592,0.34243593645101,0,0.684802919724823,0.262261207256992,0,0.202475267389826,0,0,0,0,0.17008658030214,0.198581902401771,0,0.47997726838022,0.22940928106717,5.7423196411502,13.3536218809313,8.83432054012145,0.190023419456374,0,0,0,0,0,2.02196133825892,0.831173226792462,1.63335485009895,1.25559489221072,0.7813353445238,0,0.588231488031014,2.04913645487534,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0,1.43752564364972,0.167782606057736,1.45072428402269,1.00828139742739,0.257259436035947,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0.227178579999552,0.0755715601067855,4.05810284182349,0,2.03991400112325,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.23517741427141,0.125666591329675,0,0.433798070759735,0.884610551949874,0,0,0,0,0,0,0.255457055208591,0.359445373517761,0,0.254140454146129,0,0.457500602818626,0,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0.257347907114715,0.284163499395593,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0.128867461322093,0,0,0,0.949058123089023,0,0,0,0,0.898819408654221,0.432276099749388,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.449724224769707,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0.516856586336442,0.363533729477506,0,0,0,1.03135543248187,0,0,0,0,0.354680467284547,0,0,0,0,0.21183207086382,0,0.32977250588296,2.74489525383039,0.542816324353403,0.477489376012546,0.656563598980245,0.291480836629851,0,0,0,0,0,0,0,0.169978429993855,0.419854356970974,0.138199973804424,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.179427713218951,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | ||
|short_description=p3@Ifrd1 | |short_description=p3@Ifrd1 | ||
}} | }} |
Latest revision as of 14:50, 26 September 2015
Short description: | p3@Ifrd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ifrd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -175bp_to_ENSMUST00000001672, NM_013562, uc007nky.2_5end |
EntrezGene: | Ifrd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.27e-29 | 9 |
epithelial cell of alimentary canal | 5.27e-29 | 9 |
epithelial cell | 2.01e-26 | 25 |
brush border epithelial cell | 1.54e-25 | 6 |
gut absorptive cell | 1.54e-25 | 6 |
enterocyte | 1.54e-25 | 6 |
columnar/cuboidal epithelial cell | 7.96e-22 | 7 |
endodermal cell | 1.96e-19 | 20 |
endo-epithelial cell | 5.53e-17 | 15 |
M cell of gut | 1.02e-13 | 3 |
mature alpha-beta T cell | 4.52e-07 | 9 |
alpha-beta T cell | 4.52e-07 | 9 |
immature T cell | 4.52e-07 | 9 |
mature T cell | 4.52e-07 | 9 |
immature alpha-beta T cell | 4.52e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 5.27e-29 | 9 |
gastrointestinal system epithelium | 5.27e-29 | 9 |
intestinal epithelium | 5.27e-29 | 9 |
simple columnar epithelium | 1.52e-23 | 11 |
intestinal mucosa | 9.23e-20 | 13 |
wall of intestine | 9.23e-20 | 13 |
gastrointestinal system mucosa | 9.23e-20 | 13 |
mucosa | 5.53e-17 | 15 |
organ component layer | 3.35e-10 | 24 |
gut epithelium | 7.74e-09 | 55 |
unilaminar epithelium | 2.54e-08 | 66 |
intestine | 1.21e-07 | 31 |