Personal tools

FFCP PHASE1:Mm9::chr4:91038637..91038663,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15569
|EntrezGene=15569
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q80UJ0
|UniProt=Q80UJ0
|association_with_transcript=61bp_to_ENSMUST00000107110_5end
|association_with_transcript=61bp_to_ENSMUST00000107110_5end
|cluster_id=chr4:91038637..91038663,-
|description=CAGE_peak_6_at_Elavl2_5end
|description=CAGE_peak_6_at_Elavl2_5end
|id=chr4:91038637..91038663,-
|id=chr4:91038637..91038663,-
|ontology_enrichment_celltype=CL:0000117!9.17e-12!23;CL:0000337!9.17e-12!23;CL:0000540!2.34e-07!33;CL:0000047!2.34e-07!33;CL:0000031!2.34e-07!33;CL:0000404!2.34e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,9.98e-22,23;CL:0000337,9.98e-22,23;CL:0000540,1.25e-13,33;CL:0000047,1.25e-13,33;CL:0000031,1.25e-13,33;CL:0000404,1.25e-13,33;CL:0000393,8.54e-11,39;CL:0000211,8.54e-11,39;CL:0002319,2.34e-09,43;CL:0000221,4.86e-09,44;CL:0000133,4.86e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.19e-21!52;UBERON:0005068!3.19e-21!52;UBERON:0006241!3.19e-21!52;UBERON:0007135!3.19e-21!52;UBERON:0000955!3.98e-20!50;UBERON:0006238!3.98e-20!50;UBERON:0002616!1.27e-19!49;UBERON:0002346!1.92e-19!71;UBERON:0003075!1.92e-19!71;UBERON:0007284!1.92e-19!71;UBERON:0000033!3.62e-19!63;UBERON:0002020!6.45e-19!34;UBERON:0000073!9.00e-18!75;UBERON:0001016!9.00e-18!75;UBERON:0001017!1.64e-17!73;UBERON:0005743!1.64e-17!73;UBERON:0003056!3.84e-17!49;UBERON:0003080!8.76e-17!40;UBERON:0002780!4.59e-16!39;UBERON:0001890!4.59e-16!39;UBERON:0006240!4.59e-16!39;UBERON:0002791!9.93e-16!29;UBERON:0003528!9.93e-16!29;UBERON:0001893!9.93e-16!29;UBERON:0004121!2.32e-14!102;UBERON:0000924!2.32e-14!102;UBERON:0006601!2.32e-14!102;UBERON:0000956!1.14e-10!21;UBERON:0001869!1.14e-10!21;UBERON:0000203!1.14e-10!21;UBERON:0007811!1.11e-09!86;UBERON:0002021!1.41e-09!10;UBERON:0000411!1.41e-09!10;UBERON:0001950!1.41e-09!10;UBERON:0000153!1.63e-08!94;UBERON:0002619!2.49e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.40e-38,54;UBERON:0002020,2.18e-38,34;UBERON:0001049,4.31e-35,52;UBERON:0005068,4.31e-35,52;UBERON:0006241,4.31e-35,52;UBERON:0007135,4.31e-35,52;UBERON:0003528,2.79e-31,29;UBERON:0002791,2.79e-31,29;UBERON:0001893,2.79e-31,29;UBERON:0001017,4.81e-31,73;UBERON:0001016,6.13e-30,75;UBERON:0002346,2.39e-28,64;UBERON:0003075,2.39e-28,64;UBERON:0007284,2.39e-28,64;UBERON:0003080,2.03e-27,40;UBERON:0002616,5.12e-27,46;UBERON:0000955,2.87e-26,47;UBERON:0006238,2.87e-26,47;UBERON:0002780,6.30e-26,39;UBERON:0001890,6.30e-26,39;UBERON:0006240,6.30e-26,39;UBERON:0010371,1.15e-23,73;UBERON:0004121,1.08e-22,95;UBERON:0000924,1.08e-22,95;UBERON:0006601,1.08e-22,95;UBERON:0003056,1.44e-22,49;UBERON:0000956,4.49e-20,21;UBERON:0001869,4.49e-20,21;UBERON:0000203,4.49e-20,21;UBERON:0002021,1.83e-19,10;UBERON:0000411,1.83e-19,10;UBERON:0001950,1.83e-19,10;UBERON:0010314,8.24e-17,92;UBERON:0002619,6.03e-15,17;UBERON:0002420,2.15e-12,8;UBERON:0007245,2.15e-12,8;UBERON:0010009,2.15e-12,8;UBERON:0010011,2.15e-12,8;UBERON:0000454,2.15e-12,8;UBERON:0000025,5.97e-11,114;UBERON:0004111,1.20e-09,122;UBERON:0002240,1.44e-09,6;UBERON:0005174,1.44e-09,6;UBERON:0001137,1.44e-09,6;UBERON:0001948,4.21e-08,5;UBERON:0002315,4.21e-08,5;UBERON:0003076,6.85e-08,12;UBERON:0003057,6.85e-08,12;UBERON:0000369,7.83e-08,5;UBERON:0002435,7.83e-08,5;UBERON:0000204,7.83e-08,5;UBERON:0010082,7.83e-08,5;UBERON:0002950,9.88e-08,4;UBERON:0001891,9.88e-08,4;UBERON:0009616,9.88e-08,4;UBERON:0010286,9.88e-08,4
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0,1.01158230429799,0,1.90149421051854,0,0,0,0,0,0,0,1.45165457231869,1.89008313664367,1.47227472945967,2.28520787523043,1.32521124570968,0.979926393719632,0.575072826109418,0,13.2139057199266,14.8117312178818,13.6709814598057,1.45074916503213,2.28719109006024,1.04182674111352,5.02529398202486,8.4414391504752,12.3766580699216,3.24091444021034,2.70506193518296,3.16879057903011,0.151452386666368,0.377857800533928,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0,0.173485326766136,0.608930956624282,0,0.452167921657868,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,10.7849260371472,3.66000482254901,2.76439574648302,10.6032835317289,12.7857728665165,12.0517065844545,8.76102820565891,0.407357455401265,0,0.252722758433675,0,0.130120442962704,0.689706313300419,0.180062129805349,0.150704817835715,0.340182495756639,1.0249097622788,0.0937017245597288,0.776110112217047,0,0.189106080167819,0,0,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0.710234206755631,0.196764231747404,0.308534225774757,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,12.6173969138476,4.73361216944708,0,0,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.8858587585951,0.159454768657487,0.327726629431476,0,0,0,0,0,0,8.83028244932856,7.03270119553219,0,0,0,0.390438744296638,0,0,0.445597348164788,0,0,0,0,0.963963949265421,0,0,0.325773918707152,0,0,0,0.906970670894253,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,1.05418608574999,0,0.340439605753788,0.36012218806262,0.258717367565509,0.428674070063185,0,0.178368817602071,0.493647061806363,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,5.56275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0.56369293868419,1.94371509857172,1.65458490457098,0.777804753376191,0.387479470433193,0.844780627453891,0.938857909166032,1.43224823328345,2.51662426621706,0.966336483304024,0.864090018773596,0,0,0.102710957164827,0,0,0,0,0,0.201932899896295,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.358855426437903,0,0,0,0,0,0,18.0720589637461,18.8733346967943,17.1868654031819,12.0297227640581,20.5524755931193,18.8848474347425,18.2256075062588,17.1122057225204,17.672553950384,16.5683299760582,0.518936737920883,0.798049746802062,0.512200817262403,0.486213434136588,0.628839487883947,0.183843508450014,1.11123363900808,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,0.377252682772152,0.561849044819294,0.640251524048693,0.574354689556133,2.85776214769844,0.347652977834566,1.15745532278223,0,0.883193520806384,1.37147700954166,0.177475806159338,0.476872379894642,1.30811774969096,0.282328141245992,0.592302255241736,0.365855945745545,1.31534855718921,0.407412341537585,0.561142271657738,0.355905054372522,0.492522411877817,0.409231043169689,0.309873682371932,0.385813221962283,0.999242311751784,0.701794825336225,0.644613162144895,0.57386499620653,0.441182838239031,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85960031981627,0,1.01158230429799,0,1.90149421051854,0,0,0,0,0,0,0,1.45165457231869,1.89008313664367,1.47227472945967,2.28520787523043,1.32521124570968,0.979926393719632,0.575072826109418,0,13.2139057199266,14.8117312178818,13.6709814598057,1.45074916503213,2.28719109006024,1.04182674111352,5.02529398202486,8.4414391504752,12.3766580699216,3.24091444021034,2.70506193518296,3.16879057903011,0.151452386666368,0.377857800533928,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0,0.173485326766136,0.608930956624282,0,0.452167921657868,0.23517741427141,0,0,0.144599356919912,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,10.7849260371472,3.66000482254901,2.76439574648302,10.6032835317289,12.7857728665165,12.0517065844545,8.76102820565891,0.407357455401265,0,0.252722758433675,0,0.130120442962704,0.689706313300419,0.180062129805349,0.150704817835715,0.340182495756639,1.0249097622788,0.0937017245597288,0.776110112217047,0,0.189106080167819,0,0,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0.710234206755631,0.196764231747404,0.308534225774757,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,12.6173969138476,4.73361216944708,0,0,0.426576501070468,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0.8858587585951,0.159454768657487,0.327726629431476,0,0,0,0,0,0,8.83028244932856,7.03270119553219,0,0,0,0.390438744296638,0,0,0.445597348164788,0,0,0,0,0.963963949265421,0,0,0.325773918707152,0,0,0,0.906970670894253,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,1.05418608574999,0,0.340439605753788,0.36012218806262,0.258717367565509,0.428674070063185,0,0.178368817602071,0.493647061806363,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,5.56275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0.56369293868419,1.94371509857172,1.65458490457098,0.777804753376191,0.387479470433193,0.844780627453891,0.938857909166032,1.43224823328345,2.51662426621706,0.966336483304024,0.864090018773596,0,0,0.102710957164827,0,0,0,0,0,0.201932899896295,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.358855426437903,0,0,0,0,0,0,18.0720589637461,18.8733346967943,17.1868654031819,12.0297227640581,20.5524755931193,18.8848474347425,18.2256075062588,17.1122057225204,17.672553950384,16.5683299760582,0.518936737920883,0.798049746802062,0.512200817262403,0.486213434136588,0.628839487883947,0.183843508450014,1.11123363900808,0.412070114477788,0.64183841918363,0.758091635291392,0.50695859978048,0.377252682772152,0.561849044819294,0.640251524048693,0.574354689556133,2.85776214769844,0.347652977834566,1.15745532278223,0,0.883193520806384,1.37147700954166,0.177475806159338,0.476872379894642,1.30811774969096,0.282328141245992,0.592302255241736,0.365855945745545,1.31534855718921,0.407412341537585,0.561142271657738,0.355905054372522,0.492522411877817,0.409231043169689,0.309873682371932,0.385813221962283,0.999242311751784,0.701794825336225,0.644613162144895,0.57386499620653,0.441182838239031,0
|short_description=p6@Elavl2
|short_description=p6@Elavl2
}}
}}

Latest revision as of 07:05, 27 September 2015

Short description:p6@Elavl2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Elavl2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 61bp_to_ENSMUST00000107110_5end
EntrezGene:Elavl2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Elavl2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.78
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D510.60
cortex, neonate N30.CNhs11107.1392-42F212.79
diencephalon, adult.CNhs10482.20-12F212.05
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E812.62
hippocampus, neonate N00.CNhs11228.627-43G14.73
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.83
medulla oblongata, neonate N30.CNhs11200.1396-42A37.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.19
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A420.55
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.67
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.98e-2223
neuroblast (sensu Vertebrata)9.98e-2223
neuron1.25e-1333
neuronal stem cell1.25e-1333
neuroblast1.25e-1333
electrically signaling cell1.25e-1333
electrically responsive cell8.54e-1139
electrically active cell8.54e-1139
neural cell2.34e-0943
ectodermal cell4.86e-0944
neurectodermal cell4.86e-0944

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.40e-3854
gray matter2.18e-3834
neural tube4.31e-3552
neural rod4.31e-3552
future spinal cord4.31e-3552
neural keel4.31e-3552
brain grey matter2.79e-3129
regional part of telencephalon2.79e-3129
telencephalon2.79e-3129
central nervous system4.81e-3173
nervous system6.13e-3075
neurectoderm2.39e-2864
neural plate2.39e-2864
presumptive neural plate2.39e-2864
anterior neural tube2.03e-2740
regional part of brain5.12e-2746
brain2.87e-2647
future brain2.87e-2647
regional part of forebrain6.30e-2639
forebrain6.30e-2639
future forebrain6.30e-2639
ecto-epithelium1.15e-2373
ectoderm-derived structure1.08e-2295
ectoderm1.08e-2295
presumptive ectoderm1.08e-2295
pre-chordal neural plate1.44e-2249
cerebral cortex4.49e-2021
cerebral hemisphere4.49e-2021
pallium4.49e-2021
occipital lobe1.83e-1910
visual cortex1.83e-1910
neocortex1.83e-1910
structure with developmental contribution from neural crest8.24e-1792
regional part of cerebral cortex6.03e-1517
basal ganglion2.15e-128
nuclear complex of neuraxis2.15e-128
aggregate regional part of brain2.15e-128
collection of basal ganglia2.15e-128
cerebral subcortex2.15e-128
tube5.97e-11114
anatomical conduit1.20e-09122
spinal cord1.44e-096
dorsal region element1.44e-096
dorsum1.44e-096
regional part of spinal cord4.21e-085
gray matter of spinal cord4.21e-085
posterior neural tube6.85e-0812
chordal neural plate6.85e-0812
corpus striatum7.83e-085
striatum7.83e-085
ventral part of telencephalon7.83e-085
future corpus striatum7.83e-085
regional part of midbrain9.88e-084
midbrain9.88e-084
presumptive midbrain9.88e-084
midbrain neural tube9.88e-084
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:91038637..91038663,-&oldid=4298350"