FFCP PHASE1:Mm9::chr4:153674116..153674137,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=230972 | |EntrezGene=230972 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U5C8 | |UniProt=Q3U5C8 | ||
|association_with_transcript=25bp_to_ENSMUST00000030898_5end | |association_with_transcript=25bp_to_ENSMUST00000030898_5end | ||
|cluster_id=chr4:153674116..153674137,- | |||
|description=CAGE_peak_3_at_Arhgef16_5end | |description=CAGE_peak_3_at_Arhgef16_5end | ||
|id=chr4:153674116..153674137,- | |id=chr4:153674116..153674137,- | ||
|ontology_enrichment_celltype=CL:0000066!4.95e-08!25;CL:0002563!1.70e-07!9;CL:0002251!1.70e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.74e-11,6;CL:0000677,1.74e-11,6;CL:0000584,1.74e-11,6;CL:0000075,1.09e-09,7;CL:0002076,1.76e-09,15;CL:0002563,2.33e-09,9;CL:0002251,2.33e-09,9;CL:0000066,6.01e-09,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.36e-24!59;UBERON:0000160!1.37e-24!43;UBERON:0004119!1.77e-19!130;UBERON:0000925!1.77e-19!130;UBERON:0006595!1.77e-19!130;UBERON:0001007!1.29e-18!128;UBERON:0001555!1.29e-18!128;UBERON:0007026!1.29e-18!128;UBERON:0004921!1.91e-17!126;UBERON:0004185!1.91e-17!126;UBERON:0000344!1.13e-11!15;UBERON:0001242!1.85e-10!13;UBERON:0000060!1.85e-10!13;UBERON:0001262!1.85e-10!13;UBERON:0004786!1.85e-10!13;UBERON:0002108!3.42e-09!16;UBERON:0004923!1.16e-07!24;UBERON:0003350!1.70e-07!9;UBERON:0004808!1.70e-07!9;UBERON:0001277!1.70e-07!9;UBERON:0000485!1.97e-07!11;UBERON:0001045!3.57e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.54e-33,31;UBERON:0005409,2.04e-28,47;UBERON:0000344,1.01e-17,15;UBERON:0001242,3.17e-15,13;UBERON:0001262,3.17e-15,13;UBERON:0004786,3.17e-15,13;UBERON:0004923,4.80e-13,24;UBERON:0004119,2.42e-11,118;UBERON:0000925,2.42e-11,118;UBERON:0006595,2.42e-11,118;UBERON:0001007,7.82e-11,116;UBERON:0001555,7.82e-11,116;UBERON:0007026,7.82e-11,116;UBERON:0004921,1.63e-09,114;UBERON:0003350,2.33e-09,9;UBERON:0004808,2.33e-09,9;UBERON:0001277,2.33e-09,9;UBERON:0002108,1.65e-07,4;UBERON:0000485,2.08e-07,11 | |||
|phase1_expression=0.160148847104794,14.6569671208532,10.9199817453489,8.46899791659124,12.0214975187123,5.54001597309236,3.50418960893289,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,1.43993180514066,3.89995777814189,8.6134794617253,6.8921919385452,5.17130958446134,4.18051522804023,5.04060259519861,3.32595765982957,0,0,0,1.1554064790051,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,0.421333260395256,0,0,0,0.281686839553361,0,0,0,1.08245520505607,2.02687892380079,1.01104889002957,1.25602267690966,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,9.31958806090611,0,0,5.62005521458901,0,0,0,0,0,0.125654352112864,0,0,0,0,0.305518091550949,0.373220911830279,1.51633655060205,2.52530227063769,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1992640172547,3.70230793328962,0,0,0.257734922644187,1.00841762311671,1.77902435075896,1.90225626112559,5.21981967698963,3.62337700392824,3.2673577144035,4.57599885694647,4.28920991662064,4.49409704327111,4.97117514711797,5.97423819763102,0.569003702859245,0.114248512609729,0,0.610953983535943,0.581857461502877,0.631222379012867,0.189709611372772,2.06654207171443,1.09899109488962,1.1105744752962,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0,0,0,0.670025029767263,0.476087281772027,0,0,0.44292937929755,0,0.655453258862952,0.345369963731791,0.289298117163023,0,0,2.95058563811422,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,5.30980553359851,0,0.604647113929502,1.13163047853539,1.77181135728464,0.922305443831782,3.35956781118687,0.727067458955011,0.712994756769443,2.84433082142234,4.21674434299995,3.09406629744561,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0.304464949114599,0.23467170806371,2.54198485036584,1.32317038832977,0.16488625294148,0,0.0603129249281559,0,0.328281799490123,7.28702091574627,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0.474503990371703,0.203319467126849,0.86404272657441,1.46361807210128,1.09181281873089,0.944050424693745,0.909188012978695,2.6175594198403,4.92536898508813,0.621339313086926,0,0,0,0.194451188344048,0.904118764344118,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0.632022241256357,0.405450430580328,0.205421914329655,0,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.0897138566094757,0.335769232728157,0.386379188064381,0.375364950902364,0.915758121336325,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.666740183404846,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.384150914429216,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0,0.342869252385415,0,0.715308569841963,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0,0 | |phase1_expression=0.160148847104794,14.6569671208532,10.9199817453489,8.46899791659124,12.0214975187123,5.54001597309236,3.50418960893289,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,1.43993180514066,3.89995777814189,8.6134794617253,6.8921919385452,5.17130958446134,4.18051522804023,5.04060259519861,3.32595765982957,0,0,0,1.1554064790051,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0.679971333707751,0,0,0.448026887097336,0.421333260395256,0,0,0,0.281686839553361,0,0,0,1.08245520505607,2.02687892380079,1.01104889002957,1.25602267690966,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,9.31958806090611,0,0,5.62005521458901,0,0,0,0,0,0.125654352112864,0,0,0,0,0.305518091550949,0.373220911830279,1.51633655060205,2.52530227063769,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1992640172547,3.70230793328962,0,0,0.257734922644187,1.00841762311671,1.77902435075896,1.90225626112559,5.21981967698963,3.62337700392824,3.2673577144035,4.57599885694647,4.28920991662064,4.49409704327111,4.97117514711797,5.97423819763102,0.569003702859245,0.114248512609729,0,0.610953983535943,0.581857461502877,0.631222379012867,0.189709611372772,2.06654207171443,1.09899109488962,1.1105744752962,0,0.166845105716094,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0,0,0,0.670025029767263,0.476087281772027,0,0,0.44292937929755,0,0.655453258862952,0.345369963731791,0.289298117163023,0,0,2.95058563811422,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,5.30980553359851,0,0.604647113929502,1.13163047853539,1.77181135728464,0.922305443831782,3.35956781118687,0.727067458955011,0.712994756769443,2.84433082142234,4.21674434299995,3.09406629744561,0,0.18006109403131,0.129358683782755,0,0.354680467284547,0,0.164549020602121,0.304464949114599,0.23467170806371,2.54198485036584,1.32317038832977,0.16488625294148,0,0.0603129249281559,0,0.328281799490123,7.28702091574627,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0.474503990371703,0.203319467126849,0.86404272657441,1.46361807210128,1.09181281873089,0.944050424693745,0.909188012978695,2.6175594198403,4.92536898508813,0.621339313086926,0,0,0,0.194451188344048,0.904118764344118,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0.632022241256357,0.405450430580328,0.205421914329655,0,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.0897138566094757,0.335769232728157,0.386379188064381,0.375364950902364,0.915758121336325,0,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.666740183404846,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.384150914429216,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0,0.342869252385415,0,0.715308569841963,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0,0 | ||
|short_description=p3@Arhgef16 | |short_description=p3@Arhgef16 | ||
}} | }} |
Latest revision as of 19:23, 26 September 2015
Short description: | p3@Arhgef16 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Arhgef16_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 25bp_to_ENSMUST00000030898_5end |
EntrezGene: | Arhgef16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.74e-11 | 6 |
gut absorptive cell | 1.74e-11 | 6 |
enterocyte | 1.74e-11 | 6 |
columnar/cuboidal epithelial cell | 1.09e-09 | 7 |
endo-epithelial cell | 1.76e-09 | 15 |
intestinal epithelial cell | 2.33e-09 | 9 |
epithelial cell of alimentary canal | 2.33e-09 | 9 |
epithelial cell | 6.01e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.54e-33 | 31 |
gastrointestinal system | 2.04e-28 | 47 |
mucosa | 1.01e-17 | 15 |
intestinal mucosa | 3.17e-15 | 13 |
wall of intestine | 3.17e-15 | 13 |
gastrointestinal system mucosa | 3.17e-15 | 13 |
organ component layer | 4.80e-13 | 24 |
endoderm-derived structure | 2.42e-11 | 118 |
endoderm | 2.42e-11 | 118 |
presumptive endoderm | 2.42e-11 | 118 |
digestive system | 7.82e-11 | 116 |
digestive tract | 7.82e-11 | 116 |
primitive gut | 7.82e-11 | 116 |
subdivision of digestive tract | 1.63e-09 | 114 |
epithelium of mucosa | 2.33e-09 | 9 |
gastrointestinal system epithelium | 2.33e-09 | 9 |
intestinal epithelium | 2.33e-09 | 9 |
small intestine | 1.65e-07 | 4 |
simple columnar epithelium | 2.08e-07 | 11 |