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FFCP PHASE1:Mm9::chr11:61267392..61267412,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22671
|EntrezGene=22671
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=Q96DY5,Q8JZT5,Q5NCN2
|UniProt=Q96DY5,Q8JZT5,Q5NCN2
|association_with_transcript=-4bp_to_NM_009548,uc007jhj.1,uc007jhk.1,uc007jhl.1_5end
|association_with_transcript=-4bp_to_NM_009548,uc007jhj.1,uc007jhk.1,uc007jhl.1_5end
|cluster_id=chr11:61267392..61267412,-
|description=CAGE_peak_3_at_Rnf112_5end
|description=CAGE_peak_3_at_Rnf112_5end
|id=chr11:61267392..61267412,-
|id=chr11:61267392..61267412,-
|ontology_enrichment_celltype=CL:0000117!1.45e-11!23;CL:0000337!1.45e-11!23;CL:0000540!2.02e-08!33;CL:0000047!2.02e-08!33;CL:0000031!2.02e-08!33;CL:0000404!2.02e-08!33
|ontology_enrichment_celltype=CL:0000117!1.45e-11!23;CL:0000337!1.45e-11!23;CL:0000540!2.02e-08!33;CL:0000047!2.02e-08!33;CL:0000031!2.02e-08!33;CL:0000404!2.02e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,3.79e-17,23;CL:0000337,3.79e-17,23;CL:0000540,8.09e-11,33;CL:0000047,8.09e-11,33;CL:0000031,8.09e-11,33;CL:0000404,8.09e-11,33;CL:0000393,1.33e-08,39;CL:0000211,1.33e-08,39;CL:0002319,1.77e-07,43;CL:0000221,3.14e-07,44;CL:0000133,3.14e-07,44;CL:0002610,7.47e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.84e-25!52;UBERON:0005068!1.84e-25!52;UBERON:0006241!1.84e-25!52;UBERON:0007135!1.84e-25!52;UBERON:0000955!4.98e-24!50;UBERON:0006238!4.98e-24!50;UBERON:0001017!7.74e-24!73;UBERON:0005743!7.74e-24!73;UBERON:0002616!1.09e-23!49;UBERON:0000073!1.45e-22!75;UBERON:0001016!1.45e-22!75;UBERON:0003080!7.80e-20!40;UBERON:0000033!1.00e-19!63;UBERON:0002780!3.72e-19!39;UBERON:0001890!3.72e-19!39;UBERON:0006240!3.72e-19!39;UBERON:0002346!8.00e-18!71;UBERON:0003075!8.00e-18!71;UBERON:0007284!8.00e-18!71;UBERON:0002020!1.30e-17!34;UBERON:0003056!2.41e-17!49;UBERON:0004121!1.58e-15!102;UBERON:0000924!1.58e-15!102;UBERON:0006601!1.58e-15!102;UBERON:0002791!3.03e-14!29;UBERON:0003528!3.03e-14!29;UBERON:0001893!3.03e-14!29;UBERON:0007811!6.46e-10!86;UBERON:0002021!6.81e-10!10;UBERON:0000411!6.81e-10!10;UBERON:0001950!6.81e-10!10;UBERON:0000956!3.87e-09!21;UBERON:0001869!3.87e-09!21;UBERON:0000203!3.87e-09!21;UBERON:0002619!7.56e-09!17;UBERON:0000153!4.35e-08!94
|ontology_enrichment_uberon=UBERON:0001049!1.84e-25!52;UBERON:0005068!1.84e-25!52;UBERON:0006241!1.84e-25!52;UBERON:0007135!1.84e-25!52;UBERON:0000955!4.98e-24!50;UBERON:0006238!4.98e-24!50;UBERON:0001017!7.74e-24!73;UBERON:0005743!7.74e-24!73;UBERON:0002616!1.09e-23!49;UBERON:0000073!1.45e-22!75;UBERON:0001016!1.45e-22!75;UBERON:0003080!7.80e-20!40;UBERON:0000033!1.00e-19!63;UBERON:0002780!3.72e-19!39;UBERON:0001890!3.72e-19!39;UBERON:0006240!3.72e-19!39;UBERON:0002346!8.00e-18!71;UBERON:0003075!8.00e-18!71;UBERON:0007284!8.00e-18!71;UBERON:0002020!1.30e-17!34;UBERON:0003056!2.41e-17!49;UBERON:0004121!1.58e-15!102;UBERON:0000924!1.58e-15!102;UBERON:0006601!1.58e-15!102;UBERON:0002791!3.03e-14!29;UBERON:0003528!3.03e-14!29;UBERON:0001893!3.03e-14!29;UBERON:0007811!6.46e-10!86;UBERON:0002021!6.81e-10!10;UBERON:0000411!6.81e-10!10;UBERON:0001950!6.81e-10!10;UBERON:0000956!3.87e-09!21;UBERON:0001869!3.87e-09!21;UBERON:0000203!3.87e-09!21;UBERON:0002619!7.56e-09!17;UBERON:0000153!4.35e-08!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.56e-42,54;UBERON:0001049,2.15e-36,52;UBERON:0005068,2.15e-36,52;UBERON:0006241,2.15e-36,52;UBERON:0007135,2.15e-36,52;UBERON:0001017,7.11e-35,73;UBERON:0001016,1.05e-33,75;UBERON:0002020,9.15e-30,34;UBERON:0002616,9.51e-30,46;UBERON:0000955,5.84e-29,47;UBERON:0006238,5.84e-29,47;UBERON:0002346,4.88e-28,64;UBERON:0003075,4.88e-28,64;UBERON:0007284,4.88e-28,64;UBERON:0003080,6.62e-25,40;UBERON:0004121,1.01e-24,95;UBERON:0000924,1.01e-24,95;UBERON:0006601,1.01e-24,95;UBERON:0010371,1.42e-23,73;UBERON:0002780,1.56e-23,39;UBERON:0001890,1.56e-23,39;UBERON:0006240,1.56e-23,39;UBERON:0003528,2.50e-22,29;UBERON:0002791,2.50e-22,29;UBERON:0001893,2.50e-22,29;UBERON:0002021,2.79e-21,10;UBERON:0000411,2.79e-21,10;UBERON:0001950,2.79e-21,10;UBERON:0003056,3.62e-19,49;UBERON:0010314,5.01e-17,92;UBERON:0002619,3.62e-14,17;UBERON:0000025,2.93e-13,114;UBERON:0000956,3.25e-13,21;UBERON:0001869,3.25e-13,21;UBERON:0000203,3.25e-13,21;UBERON:0004111,7.49e-12,122;UBERON:0003076,1.05e-11,12;UBERON:0003057,1.05e-11,12;UBERON:0002420,7.50e-11,8;UBERON:0007245,7.50e-11,8;UBERON:0010009,7.50e-11,8;UBERON:0010011,7.50e-11,8;UBERON:0000454,7.50e-11,8;UBERON:0000369,3.76e-09,5;UBERON:0002435,3.76e-09,5;UBERON:0000204,3.76e-09,5;UBERON:0010082,3.76e-09,5;UBERON:0001948,4.27e-09,5;UBERON:0002315,4.27e-09,5;UBERON:0002240,1.59e-07,6;UBERON:0005174,1.59e-07,6;UBERON:0001137,1.59e-07,6;UBERON:0011216,1.69e-07,194;UBERON:0004684,7.47e-07,3;UBERON:0002275,7.47e-07,3
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0,0.420649922702764,1.71390590642282,2.42955395046775,0.489963196859816,0.575072826109418,0,4.40463523997555,8.81042632787795,8.60196586234964,1.18697658957174,2.28719109006024,1.04182674111352,6.42120897703176,0.56276261003168,3.81995619442025,2.65165726926301,2.42031857358475,1.86399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0.520455980298408,0,0,0,0,0,0,0,0,0,0,0,0,36.3048188294318,31.4170060220183,0,0,0,0,2.09706895166752,11.8950156732843,2.76439574648302,14.0797699355744,18.4115129277838,6.44142938134636,11.6813709408785,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0.134206418760372,20.6084149592845,0.92614151141356,0,0,0,0,0.128867461322093,0.403367049246685,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,2.24770825982909,1.40654023910644,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0.321321316421807,2.2710413633323,0.712262414669021,0.162886959353576,4.45419332025846,0,0.242780636154981,0,1.13163047853539,0.295301892880773,0.922305443831782,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.428674070063185,5.67488747655275,3.56737635204141,0.822745103010605,0.608929898229199,0,0,0.441056796109924,0,0,0,0.119372344003136,0.820704498725306,0,0.741701208042039,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,12.9892923801925,13.8097570952153,16.0410743763031,13.4045482228076,13.7016503954128,23.4172108190807,12.8254275044043,15.3109209096235,13.1411298605419,11.9084871702919,0.207574695168353,0.399024873401031,0.341467211508268,0,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,1.26348605881899,0.25347929989024,0.377252682772152,0.280924522409647,0.640251524048693,0.804096565378586,0,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.177475806159338,1.1921809497366,0.436039249896986,0.564656282491984,0.507687647350059,0.182927972872773,0.526139422875686,0,0.561142271657738,0.830445126869219,0,0.409231043169689,0.619747364743864,0,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,3.1691570175309,0,0,0,0,0,0,0,0.103689612308478,0,0.420649922702764,1.71390590642282,2.42955395046775,0.489963196859816,0.575072826109418,0,4.40463523997555,8.81042632787795,8.60196586234964,1.18697658957174,2.28719109006024,1.04182674111352,6.42120897703176,0.56276261003168,3.81995619442025,2.65165726926301,2.42031857358475,1.86399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0.520455980298408,0,0,0,0,0,0,0,0,0,0,0,0,36.3048188294318,31.4170060220183,0,0,0,0,2.09706895166752,11.8950156732843,2.76439574648302,14.0797699355744,18.4115129277838,6.44142938134636,11.6813709408785,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0.134206418760372,20.6084149592845,0.92614151141356,0,0,0,0,0.128867461322093,0.403367049246685,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,2.24770825982909,1.40654023910644,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0.321321316421807,2.2710413633323,0.712262414669021,0.162886959353576,4.45419332025846,0,0.242780636154981,0,1.13163047853539,0.295301892880773,0.922305443831782,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.428674070063185,5.67488747655275,3.56737635204141,0.822745103010605,0.608929898229199,0,0,0.441056796109924,0,0,0,0.119372344003136,0.820704498725306,0,0.741701208042039,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,12.9892923801925,13.8097570952153,16.0410743763031,13.4045482228076,13.7016503954128,23.4172108190807,12.8254275044043,15.3109209096235,13.1411298605419,11.9084871702919,0.207574695168353,0.399024873401031,0.341467211508268,0,0.419226325255965,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,1.26348605881899,0.25347929989024,0.377252682772152,0.280924522409647,0.640251524048693,0.804096565378586,0,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.177475806159338,1.1921809497366,0.436039249896986,0.564656282491984,0.507687647350059,0.182927972872773,0.526139422875686,0,0.561142271657738,0.830445126869219,0,0.409231043169689,0.619747364743864,0,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p3@Rnf112
|short_description=p3@Rnf112
}}
}}

Latest revision as of 20:30, 1 October 2015

Short description:p3@Rnf112
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rnf112_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: -4bp_to_NM_009548, uc007jhj.1, uc007jhk.1, uc007jhl.1_5end
EntrezGene:Rnf112
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rnf112

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B236.30
cerebellum, neonate N30.CNhs11135.1395-42I231.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D514.08
cortex, neonate N30.CNhs11107.1392-42F218.41
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B211.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E820.61
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.40
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A523.42
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.31
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.56e-4254
neural tube2.15e-3652
neural rod2.15e-3652
future spinal cord2.15e-3652
neural keel2.15e-3652
central nervous system7.11e-3573
nervous system1.05e-3375
gray matter9.15e-3034
regional part of brain9.51e-3046
brain5.84e-2947
future brain5.84e-2947
neurectoderm4.88e-2864
neural plate4.88e-2864
presumptive neural plate4.88e-2864
anterior neural tube6.62e-2540
ectoderm-derived structure1.01e-2495
ectoderm1.01e-2495
presumptive ectoderm1.01e-2495
ecto-epithelium1.42e-2373
regional part of forebrain1.56e-2339
forebrain1.56e-2339
future forebrain1.56e-2339
brain grey matter2.50e-2229
regional part of telencephalon2.50e-2229
telencephalon2.50e-2229
occipital lobe2.79e-2110
visual cortex2.79e-2110
neocortex2.79e-2110
pre-chordal neural plate3.62e-1949
structure with developmental contribution from neural crest5.01e-1792
regional part of cerebral cortex3.62e-1417
tube2.93e-13114
cerebral cortex3.25e-1321
cerebral hemisphere3.25e-1321
pallium3.25e-1321
anatomical conduit7.49e-12122
posterior neural tube1.05e-1112
chordal neural plate1.05e-1112
basal ganglion7.50e-118
nuclear complex of neuraxis7.50e-118
aggregate regional part of brain7.50e-118
collection of basal ganglia7.50e-118
cerebral subcortex7.50e-118
corpus striatum3.76e-095
striatum3.76e-095
ventral part of telencephalon3.76e-095
future corpus striatum3.76e-095
regional part of spinal cord4.27e-095
gray matter of spinal cord4.27e-095
spinal cord1.59e-076
dorsal region element1.59e-076
dorsum1.59e-076
organ system subdivision1.69e-07194
raphe nuclei7.47e-073
reticular formation7.47e-073
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