FFCP PHASE1:Mm9::chr4:133157786..133157804,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=55948 | |EntrezGene=55948 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=O70456 | |UniProt=O70456 | ||
|association_with_transcript=278bp_to_ENSMUST00000057311,NM_018754,uc008vdc.1_5end | |association_with_transcript=278bp_to_ENSMUST00000057311,NM_018754,uc008vdc.1_5end | ||
|cluster_id=chr4:133157786..133157804,- | |||
|description=CAGE_peak_3_at_Sfn_5end | |description=CAGE_peak_3_at_Sfn_5end | ||
|id=chr4:133157786..133157804,- | |id=chr4:133157786..133157804,- | ||
|ontology_enrichment_celltype=CL:0002563!3.68e-07!9;CL:0002251!3.68e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.74e-09,9;CL:0002251,3.74e-09,9;CL:0002076,1.01e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.05e-21!59;UBERON:0000160!3.56e-21!43;UBERON:0004119!1.09e-17!130;UBERON:0000925!1.09e-17!130;UBERON:0006595!1.09e-17!130;UBERON:0001007!1.86e-16!128;UBERON:0001555!1.86e-16!128;UBERON:0007026!1.86e-16!128;UBERON:0004921!2.01e-15!126;UBERON:0004185!2.01e-15!126;UBERON:0000344!6.55e-11!15;UBERON:0001242!7.99e-10!13;UBERON:0000060!7.99e-10!13;UBERON:0001262!7.99e-10!13;UBERON:0004786!7.99e-10!13;UBERON:0004923!1.70e-08!24;UBERON:0002108!9.60e-08!16;UBERON:0000464!1.32e-07!57;UBERON:0003350!3.68e-07!9;UBERON:0004808!3.68e-07!9;UBERON:0001277!3.68e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.73e-21,31;UBERON:0005409,1.83e-20,47;UBERON:0000344,3.18e-14,15;UBERON:0001242,9.38e-13,13;UBERON:0001262,9.38e-13,13;UBERON:0004786,9.38e-13,13;UBERON:0004119,1.72e-11,118;UBERON:0000925,1.72e-11,118;UBERON:0006595,1.72e-11,118;UBERON:0004923,9.91e-11,24;UBERON:0001007,2.56e-10,116;UBERON:0001555,2.56e-10,116;UBERON:0007026,2.56e-10,116;UBERON:0004921,2.38e-09,114;UBERON:0003350,3.74e-09,9;UBERON:0004808,3.74e-09,9;UBERON:0001277,3.74e-09,9;UBERON:0001008,3.57e-07,19;UBERON:0000485,6.69e-07,11 | |||
|phase1_expression=0.320297694209588,11.8651638597383,9.09998478779072,4.23449895829562,6.01074875935617,7.21880869221126,5.37309073369709,0,0.703943610758334,0,0.171217968225505,0,0,0,0.333109761815663,0,0,1.10411757875383,0.822686601634433,1.27316895539409,0.595303031057488,0,0,3.67982572424835,5.73523202667925,8.03924749761028,8.18447792702242,8.61884930743556,7.03086651988583,6.30075324399827,6.43018480900384,0,0,0,8.95440021228951,5.15327400611326,5.3084032628216,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,2.18117387875057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,2.59789249213457,3.29367825117628,3.0331466700887,1.37020655662872,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,4.6967043869531,0,0,0,0,0,1.86391761218122,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,1.32391173005411,1.8661045591514,5.55990068554084,1.47309299120532,0.650602214813519,0.229902104433473,0.540186389416048,0.753524089178575,0.204109497453984,0,0.187403449119458,1.03481348295606,0.431135985865684,1.13463648100692,0.527853372491847,1.7535658594206,2.22437799380478,0.696504333044333,1.85203922767149,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,8.26046957459495,4.7601101999438,0.213288250535234,0.928946687441754,2.83508414908605,2.8235693447268,1.33426826306922,2.47293313946327,6.64340686162316,5.10566759644434,5.02670417600539,4.77495532898762,3.50935356814416,2.69645822596266,6.26800344636613,4.97853183135918,1.13800740571849,0.799739588268102,1.1270773567308,1.22190796707189,2.13347735884388,0.98190147846446,1.58091342810643,1.47610147979602,1.255989822731,1.1105744752962,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,1.29327233116623,0.757965647081939,0.651859905768103,0.848725428875941,3.28566347603903,1.67506257441816,1.90434912708811,1.56106918286239,0.630540576424764,0.8858587585951,0.956728611944923,0.983179888294428,0.863424909329478,0.433947175744535,0,0,3.44234991113325,0.551873492609465,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.977321756121456,0.329940245945071,1.32745138339963,1.69946445308487,3.62788268357701,2.82907619633847,1.47650946440386,1.84461088766356,2.32585463851399,1.45413491791002,3.20847640546249,1.26414703174326,5.27093042874994,3.09406629744561,1.02131881726136,1.62054984628179,1.68166288917581,1.28602221018955,0,0.535106452806212,0.329098041204242,1.2178597964584,7.50949465803873,8.04961869282517,2.64634077665954,1.97863503529776,1.45317984026315,1.26657142349127,3.10368094408155,3.77524069413641,6.41257840585672,0,0.683483523191411,0,0,0,0.27338845544205,0.228778173206523,0.169978429993855,0.419854356970974,0.276399947608848,1.90934123603023,0.632671987162271,2.03319467126849,4.10420295122845,3.3454127362315,2.40198820120795,2.69728692769641,2.39695021603474,5.49687478166462,6.99920855775682,2.4853572523477,0,0.598066184175915,1.48912641411388,0.777804753376191,1.80823752868824,0.844780627453891,1.17357238645754,0.5208175393758,0.838874755405687,0.241584120826006,0,0.632022241256357,4.66267995167378,2.97861775777999,2.07873316764472,1.07416017400489,1.19208812868759,0.961563596159751,1.47689527174577,0.403865799792591,0.533447646584999,0.806609481094724,0.487289403698762,0.865906574762965,0.233753804363138,1.58711268530648,6.88156455459601,5.9211145362254,10.744615447301,2.12508553435409,0.93841237725591,2.01466786693992,5.35920947697665,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,0.486213434136588,0.419226325255965,1.10306105070008,0,0.618105171716683,0.320919209591815,0.505394423527595,1.01391719956096,0,0.37456602987953,0.704276676453562,0.459483751644906,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,0,0.436039249896986,0.846984423737976,0.846146078916765,0.548783918618318,1.05227884575137,0.407412341537585,0.561142271657738,0.593175090620871,0.591026894253381,0,1.08455788830176,0.964533054905707,2.24829520144151,1.16965804222704,0.644613162144895,0.382576664137687,0.441182838239031,0.463735671240843 | |phase1_expression=0.320297694209588,11.8651638597383,9.09998478779072,4.23449895829562,6.01074875935617,7.21880869221126,5.37309073369709,0,0.703943610758334,0,0.171217968225505,0,0,0,0.333109761815663,0,0,1.10411757875383,0.822686601634433,1.27316895539409,0.595303031057488,0,0,3.67982572424835,5.73523202667925,8.03924749761028,8.18447792702242,8.61884930743556,7.03086651988583,6.30075324399827,6.43018480900384,0,0,0,8.95440021228951,5.15327400611326,5.3084032628216,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,2.18117387875057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0.845060518660083,0,0,0,2.59789249213457,3.29367825117628,3.0331466700887,1.37020655662872,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,4.6967043869531,0,0,0,0,0,1.86391761218122,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,1.32391173005411,1.8661045591514,5.55990068554084,1.47309299120532,0.650602214813519,0.229902104433473,0.540186389416048,0.753524089178575,0.204109497453984,0,0.187403449119458,1.03481348295606,0.431135985865684,1.13463648100692,0.527853372491847,1.7535658594206,2.22437799380478,0.696504333044333,1.85203922767149,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,8.26046957459495,4.7601101999438,0.213288250535234,0.928946687441754,2.83508414908605,2.8235693447268,1.33426826306922,2.47293313946327,6.64340686162316,5.10566759644434,5.02670417600539,4.77495532898762,3.50935356814416,2.69645822596266,6.26800344636613,4.97853183135918,1.13800740571849,0.799739588268102,1.1270773567308,1.22190796707189,2.13347735884388,0.98190147846446,1.58091342810643,1.47610147979602,1.255989822731,1.1105744752962,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0,0,1.29327233116623,0.757965647081939,0.651859905768103,0.848725428875941,3.28566347603903,1.67506257441816,1.90434912708811,1.56106918286239,0.630540576424764,0.8858587585951,0.956728611944923,0.983179888294428,0.863424909329478,0.433947175744535,0,0,3.44234991113325,0.551873492609465,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.977321756121456,0.329940245945071,1.32745138339963,1.69946445308487,3.62788268357701,2.82907619633847,1.47650946440386,1.84461088766356,2.32585463851399,1.45413491791002,3.20847640546249,1.26414703174326,5.27093042874994,3.09406629744561,1.02131881726136,1.62054984628179,1.68166288917581,1.28602221018955,0,0.535106452806212,0.329098041204242,1.2178597964584,7.50949465803873,8.04961869282517,2.64634077665954,1.97863503529776,1.45317984026315,1.26657142349127,3.10368094408155,3.77524069413641,6.41257840585672,0,0.683483523191411,0,0,0,0.27338845544205,0.228778173206523,0.169978429993855,0.419854356970974,0.276399947608848,1.90934123603023,0.632671987162271,2.03319467126849,4.10420295122845,3.3454127362315,2.40198820120795,2.69728692769641,2.39695021603474,5.49687478166462,6.99920855775682,2.4853572523477,0,0.598066184175915,1.48912641411388,0.777804753376191,1.80823752868824,0.844780627453891,1.17357238645754,0.5208175393758,0.838874755405687,0.241584120826006,0,0.632022241256357,4.66267995167378,2.97861775777999,2.07873316764472,1.07416017400489,1.19208812868759,0.961563596159751,1.47689527174577,0.403865799792591,0.533447646584999,0.806609481094724,0.487289403698762,0.865906574762965,0.233753804363138,1.58711268530648,6.88156455459601,5.9211145362254,10.744615447301,2.12508553435409,0.93841237725591,2.01466786693992,5.35920947697665,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,0.486213434136588,0.419226325255965,1.10306105070008,0,0.618105171716683,0.320919209591815,0.505394423527595,1.01391719956096,0,0.37456602987953,0.704276676453562,0.459483751644906,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,0,0.436039249896986,0.846984423737976,0.846146078916765,0.548783918618318,1.05227884575137,0.407412341537585,0.561142271657738,0.593175090620871,0.591026894253381,0,1.08455788830176,0.964533054905707,2.24829520144151,1.16965804222704,0.644613162144895,0.382576664137687,0.441182838239031,0.463735671240843 | ||
|short_description=p3@Sfn | |short_description=p3@Sfn | ||
}} | }} |
Latest revision as of 11:31, 26 September 2015
Short description: | p3@Sfn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sfn_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 278bp_to_ENSMUST00000057311, NM_018754, uc008vdc.1_5end |
EntrezGene: | Sfn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.74e-09 | 9 |
epithelial cell of alimentary canal | 3.74e-09 | 9 |
endo-epithelial cell | 1.01e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.73e-21 | 31 |
gastrointestinal system | 1.83e-20 | 47 |
mucosa | 3.18e-14 | 15 |
intestinal mucosa | 9.38e-13 | 13 |
wall of intestine | 9.38e-13 | 13 |
gastrointestinal system mucosa | 9.38e-13 | 13 |
endoderm-derived structure | 1.72e-11 | 118 |
endoderm | 1.72e-11 | 118 |
presumptive endoderm | 1.72e-11 | 118 |
organ component layer | 9.91e-11 | 24 |
digestive system | 2.56e-10 | 116 |
digestive tract | 2.56e-10 | 116 |
primitive gut | 2.56e-10 | 116 |
subdivision of digestive tract | 2.38e-09 | 114 |
epithelium of mucosa | 3.74e-09 | 9 |
gastrointestinal system epithelium | 3.74e-09 | 9 |
intestinal epithelium | 3.74e-09 | 9 |
renal system | 3.57e-07 | 19 |
simple columnar epithelium | 6.69e-07 | 11 |