FFCP PHASE1:Mm9::chr11:29607397..29607416,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=158 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:29607397..29607416,+ | |||
|description=CAGE_peak_at_chr11:29607397..29607416,+ | |description=CAGE_peak_at_chr11:29607397..29607416,+ | ||
|id=chr11:29607397..29607416,+ | |id=chr11:29607397..29607416,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.01e-14!23;CL:0000337!1.01e-14!23;CL:0000540!3.68e-13!33;CL:0000047!3.68e-13!33;CL:0000031!3.68e-13!33;CL:0000404!3.68e-13!33;CL:0000393!6.79e-12!39;CL:0000211!6.79e-12!39;CL:0002319!8.88e-09!43;CL:0000221!1.27e-08!44;CL:0000133!1.27e-08!44;CL:0000055!8.88e-08!50 | |ontology_enrichment_celltype=CL:0000117!1.01e-14!23;CL:0000337!1.01e-14!23;CL:0000540!3.68e-13!33;CL:0000047!3.68e-13!33;CL:0000031!3.68e-13!33;CL:0000404!3.68e-13!33;CL:0000393!6.79e-12!39;CL:0000211!6.79e-12!39;CL:0002319!8.88e-09!43;CL:0000221!1.27e-08!44;CL:0000133!1.27e-08!44;CL:0000055!8.88e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.01e-24,23;CL:0000337,2.01e-24,23;CL:0000540,1.04e-15,33;CL:0000047,1.04e-15,33;CL:0000031,1.04e-15,33;CL:0000404,1.04e-15,33;CL:0000393,2.24e-14,39;CL:0000211,2.24e-14,39;CL:0002319,4.45e-11,43;CL:0000221,9.87e-11,44;CL:0000133,9.87e-11,44;CL:0002609,1.52e-08,6;CL:0002614,1.03e-07,3;CL:0002610,1.79e-07,3;CL:0002613,3.94e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.22e-18!75;UBERON:0001016!7.22e-18!75;UBERON:0001017!1.55e-17!73;UBERON:0005743!1.55e-17!73;UBERON:0002020!1.91e-17!34;UBERON:0001049!1.48e-16!52;UBERON:0005068!1.48e-16!52;UBERON:0006241!1.48e-16!52;UBERON:0007135!1.48e-16!52;UBERON:0002346!2.11e-16!71;UBERON:0003075!2.11e-16!71;UBERON:0007284!2.11e-16!71;UBERON:0004121!1.25e-15!102;UBERON:0000924!1.25e-15!102;UBERON:0006601!1.25e-15!102;UBERON:0000955!1.51e-15!50;UBERON:0006238!1.51e-15!50;UBERON:0002616!3.76e-15!49;UBERON:0000033!4.41e-15!63;UBERON:0002791!1.10e-14!29;UBERON:0003528!1.10e-14!29;UBERON:0001893!1.10e-14!29;UBERON:0003056!6.50e-13!49;UBERON:0003080!1.16e-12!40;UBERON:0002780!3.11e-12!39;UBERON:0001890!3.11e-12!39;UBERON:0006240!3.11e-12!39;UBERON:0000956!5.48e-10!21;UBERON:0001869!5.48e-10!21;UBERON:0000203!5.48e-10!21;UBERON:0000025!3.36e-09!114;UBERON:0004111!1.67e-08!122;UBERON:0007811!3.51e-08!86;UBERON:0002619!6.74e-08!17;UBERON:0000153!6.86e-08!94 | |ontology_enrichment_uberon=UBERON:0000073!7.22e-18!75;UBERON:0001016!7.22e-18!75;UBERON:0001017!1.55e-17!73;UBERON:0005743!1.55e-17!73;UBERON:0002020!1.91e-17!34;UBERON:0001049!1.48e-16!52;UBERON:0005068!1.48e-16!52;UBERON:0006241!1.48e-16!52;UBERON:0007135!1.48e-16!52;UBERON:0002346!2.11e-16!71;UBERON:0003075!2.11e-16!71;UBERON:0007284!2.11e-16!71;UBERON:0004121!1.25e-15!102;UBERON:0000924!1.25e-15!102;UBERON:0006601!1.25e-15!102;UBERON:0000955!1.51e-15!50;UBERON:0006238!1.51e-15!50;UBERON:0002616!3.76e-15!49;UBERON:0000033!4.41e-15!63;UBERON:0002791!1.10e-14!29;UBERON:0003528!1.10e-14!29;UBERON:0001893!1.10e-14!29;UBERON:0003056!6.50e-13!49;UBERON:0003080!1.16e-12!40;UBERON:0002780!3.11e-12!39;UBERON:0001890!3.11e-12!39;UBERON:0006240!3.11e-12!39;UBERON:0000956!5.48e-10!21;UBERON:0001869!5.48e-10!21;UBERON:0000203!5.48e-10!21;UBERON:0000025!3.36e-09!114;UBERON:0004111!1.67e-08!122;UBERON:0007811!3.51e-08!86;UBERON:0002619!6.74e-08!17;UBERON:0000153!6.86e-08!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.27e-35,54;UBERON:0002020,9.52e-35,34;UBERON:0003528,2.66e-34,29;UBERON:0002791,2.66e-34,29;UBERON:0001893,2.66e-34,29;UBERON:0001049,2.80e-31,52;UBERON:0005068,2.80e-31,52;UBERON:0006241,2.80e-31,52;UBERON:0007135,2.80e-31,52;UBERON:0002780,6.46e-29,39;UBERON:0001890,6.46e-29,39;UBERON:0006240,6.46e-29,39;UBERON:0002616,4.58e-28,46;UBERON:0003080,4.90e-28,40;UBERON:0001017,1.28e-27,73;UBERON:0000955,2.51e-27,47;UBERON:0006238,2.51e-27,47;UBERON:0001016,1.14e-26,75;UBERON:0002346,4.75e-24,64;UBERON:0003075,4.75e-24,64;UBERON:0007284,4.75e-24,64;UBERON:0000956,2.02e-22,21;UBERON:0001869,2.02e-22,21;UBERON:0000203,2.02e-22,21;UBERON:0003056,9.70e-22,49;UBERON:0010371,3.44e-20,73;UBERON:0004121,2.18e-19,95;UBERON:0000924,2.18e-19,95;UBERON:0006601,2.18e-19,95;UBERON:0002619,1.10e-18,17;UBERON:0010314,1.47e-18,92;UBERON:0002021,8.15e-16,10;UBERON:0000411,8.15e-16,10;UBERON:0001950,8.15e-16,10;UBERON:0000025,1.28e-14,114;UBERON:0004111,3.81e-13,122;UBERON:0002420,6.35e-13,8;UBERON:0007245,6.35e-13,8;UBERON:0010009,6.35e-13,8;UBERON:0010011,6.35e-13,8;UBERON:0000454,6.35e-13,8;UBERON:0002038,1.03e-07,3;UBERON:0009663,1.03e-07,3;UBERON:0009661,1.03e-07,3;UBERON:0000125,1.03e-07,3;UBERON:0002308,1.03e-07,3;UBERON:0004684,1.79e-07,3;UBERON:0002275,1.79e-07,3;UBERON:0000369,4.67e-07,5;UBERON:0002435,4.67e-07,5;UBERON:0000204,4.67e-07,5;UBERON:0010082,4.67e-07,5;UBERON:0000483,6.98e-07,174 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0,0,0,0,0,0,0,0,0.315462165358238,0.137114433605739,0,0.340173160604279,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0,0.58328969722285,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0,1.54701627683233,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0.988866362566974,0,0,0,1.45165457231869,1.21505344498522,1.47227472945967,0.571301968807607,0.883474163806454,0.734944795289724,1.24599112323707,1.83843757322004,1.10115880999389,2.55374676170375,4.30098293117482,1.18697658957174,2.37867873366265,1.56274011167028,1.67509799400829,1.68828783009504,2.44477196442896,3.24091444021034,3.55929201997757,0.745597783301202,0.302904773332736,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0.506719730950197,0,0,0.517875767294343,0,0,0.304465478312141,0.461230994512117,0.301445281105245,0.587943535678524,0.125666591329675,0.247194967734374,0.144599356919912,0,0.323533699894818,0,0,0,0.878342391034642,0.83778682725382,0,0.11981512450592,0.599902730993408,0,0.748953197024114,0.457500602818626,1.38219787324151,0.695297280769106,0.511430914660661,2.28566849015516,1.1356888414743,0.407357455401265,0.124406970610093,0,0,0.390361328888111,0,0.540186389416048,0.452114453507145,0.408218994907967,0.768682321709099,0.281105173679186,0.517406741478031,0,0.189106080167819,0.175951124163949,1.09597866213787,0.278047249225598,0,0,0.199034266818493,0,0.257347907114715,0,0.414251545071004,0.703578179943289,0.900310307305074,0.473489471170421,1.18058539048442,0.308534225774757,1.62773761325285,0.268273401399619,0.350296027101508,0.493679549740441,0.492502392237286,0.324275238183423,0.146199987425332,0,0.134206418760372,1.47202963994889,2.36680608472354,0,0,0,0.464473343720877,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0.342745537829186,0,0.610953983535943,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0.482443521363367,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0,0.585400943573396,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0.275936746304732,1.9266070798535,1.17211686592203,0,0,0.631016438832513,0,0.861693590931196,0.477937595905104,0.668396022247182,0,0,0.876767573733936,0.395287777946524,0.642642632843614,0,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0,0.484393280087717,0,0,0,0,1.66882771809459,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0.228778173206523,0.169978429993855,0.279902904647316,0.276399947608848,0,0.316335993581135,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,0.539457385539283,0.0826534557253359,0,0,0,0,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0.469428954583016,0.39061315453185,0,0.483168241652012,0.288030006257865,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0,0.0974578807397524,0.192423683280659,0.116876902181569,0.453460767230423,0,0.0897138566094757,0,0,0,0.183151624267265,0.214368379079066,0,2.25900737046827,1.38097570952153,1.14579102687879,1.3748254587495,1.37016503954128,1.5107877947794,0,3.60256962579376,2.71885445390523,1.03552062350364,0.726511433089237,0,0,0.243106717068294,0,0.367687016900028,0.44449345560323,0.824140228955577,0,0.252697211763798,0.50695859978048,0.565879024158229,0.37456602987953,0.256100609619477,0.0574354689556133,0.952587382566147,0.115884325944855,0.578727661391115,0.412085900803307,0.294397840268795,0.685738504770831,1.59728225543404,0.238436189947321,0,0.188218760830661,0.676916863133412,0.548783918618318,1.05227884575137,0.679020569229309,0,0.474540072496697,0.591026894253381,1.22769312950907,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0.765153328275374,0.220591419119515,0 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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0,0,0,0,0,0,0,0,0.315462165358238,0.137114433605739,0,0.340173160604279,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0,0.58328969722285,0,0,0.167782606057736,0,0.336093799142464,0.257259436035947,0,1.54701627683233,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0.988866362566974,0,0,0,1.45165457231869,1.21505344498522,1.47227472945967,0.571301968807607,0.883474163806454,0.734944795289724,1.24599112323707,1.83843757322004,1.10115880999389,2.55374676170375,4.30098293117482,1.18697658957174,2.37867873366265,1.56274011167028,1.67509799400829,1.68828783009504,2.44477196442896,3.24091444021034,3.55929201997757,0.745597783301202,0.302904773332736,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0.506719730950197,0,0,0.517875767294343,0,0,0.304465478312141,0.461230994512117,0.301445281105245,0.587943535678524,0.125666591329675,0.247194967734374,0.144599356919912,0,0.323533699894818,0,0,0,0.878342391034642,0.83778682725382,0,0.11981512450592,0.599902730993408,0,0.748953197024114,0.457500602818626,1.38219787324151,0.695297280769106,0.511430914660661,2.28566849015516,1.1356888414743,0.407357455401265,0.124406970610093,0,0,0.390361328888111,0,0.540186389416048,0.452114453507145,0.408218994907967,0.768682321709099,0.281105173679186,0.517406741478031,0,0.189106080167819,0.175951124163949,1.09597866213787,0.278047249225598,0,0,0.199034266818493,0,0.257347907114715,0,0.414251545071004,0.703578179943289,0.900310307305074,0.473489471170421,1.18058539048442,0.308534225774757,1.62773761325285,0.268273401399619,0.350296027101508,0.493679549740441,0.492502392237286,0.324275238183423,0.146199987425332,0,0.134206418760372,1.47202963994889,2.36680608472354,0,0,0,0.464473343720877,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0.342745537829186,0,0.610953983535943,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0.482443521363367,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0,0.585400943573396,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0.275936746304732,1.9266070798535,1.17211686592203,0,0,0.631016438832513,0,0.861693590931196,0.477937595905104,0.668396022247182,0,0,0.876767573733936,0.395287777946524,0.642642632843614,0,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,0.614870295887855,0,0,0,0,0,0,0,0.540183282093931,0.258717367565509,0.214337035031592,0,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0,0.484393280087717,0,0,0,0,1.66882771809459,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0.228778173206523,0.169978429993855,0.279902904647316,0.276399947608848,0,0.316335993581135,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,0.539457385539283,0.0826534557253359,0,0,0,0,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0.469428954583016,0.39061315453185,0,0.483168241652012,0.288030006257865,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0,0.0974578807397524,0.192423683280659,0.116876902181569,0.453460767230423,0,0.0897138566094757,0,0,0,0.183151624267265,0.214368379079066,0,2.25900737046827,1.38097570952153,1.14579102687879,1.3748254587495,1.37016503954128,1.5107877947794,0,3.60256962579376,2.71885445390523,1.03552062350364,0.726511433089237,0,0,0.243106717068294,0,0.367687016900028,0.44449345560323,0.824140228955577,0,0.252697211763798,0.50695859978048,0.565879024158229,0.37456602987953,0.256100609619477,0.0574354689556133,0.952587382566147,0.115884325944855,0.578727661391115,0.412085900803307,0.294397840268795,0.685738504770831,1.59728225543404,0.238436189947321,0,0.188218760830661,0.676916863133412,0.548783918618318,1.05227884575137,0.679020569229309,0,0.474540072496697,0.591026894253381,1.22769312950907,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0.765153328275374,0.220591419119515,0 | ||
|short_description=p@chr11:29607397..29607416,+ | |short_description=p@chr11:29607397..29607416,+ | ||
}} | }} |
Latest revision as of 18:40, 5 August 2015
Short description: | p@chr11:29607397..29607416, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:29607397..29607416, + |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.01e-24 | 23 |
neuroblast (sensu Vertebrata) | 2.01e-24 | 23 |
neuron | 1.04e-15 | 33 |
neuronal stem cell | 1.04e-15 | 33 |
neuroblast | 1.04e-15 | 33 |
electrically signaling cell | 1.04e-15 | 33 |
electrically responsive cell | 2.24e-14 | 39 |
electrically active cell | 2.24e-14 | 39 |
neural cell | 4.45e-11 | 43 |
ectodermal cell | 9.87e-11 | 44 |
neurectodermal cell | 9.87e-11 | 44 |
neuron of cerebral cortex | 1.52e-08 | 6 |
neuron of the substantia nigra | 1.03e-07 | 3 |
raphe nuclei neuron | 1.79e-07 | 3 |
striatum neuron | 3.94e-07 | 3 |