FFCP PHASE1:Mm9::chr11:115773629..115773649,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68528 | |EntrezGene=68528 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=306 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U0I6 | |UniProt=Q3U0I6 | ||
|association_with_transcript=298bp_to_ENSMUST00000132961,NM_001162998,uc011yhr.1_5end | |association_with_transcript=298bp_to_ENSMUST00000132961,NM_001162998,uc011yhr.1_5end | ||
|cluster_id=chr11:115773629..115773649,+ | |||
|description=CAGE_peak_1_at_1110017F19Rik_5end | |description=CAGE_peak_1_at_1110017F19Rik_5end | ||
|id=chr11:115773629..115773649,+ | |id=chr11:115773629..115773649,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.51e-07,9;CL:0002251,2.51e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.82e-27!59;UBERON:0000160!1.59e-20!43;UBERON:0001007!4.01e-19!128;UBERON:0001555!4.01e-19!128;UBERON:0007026!4.01e-19!128;UBERON:0004119!8.29e-19!130;UBERON:0000925!8.29e-19!130;UBERON:0006595!8.29e-19!130;UBERON:0004921!7.28e-18!126;UBERON:0004185!7.28e-18!126;UBERON:0000344!2.34e-10!15;UBERON:0001242!5.24e-09!13;UBERON:0000060!5.24e-09!13;UBERON:0001262!5.24e-09!13;UBERON:0004786!5.24e-09!13;UBERON:0005178!3.04e-08!17;UBERON:0005181!3.04e-08!17;UBERON:0002224!3.04e-08!17;UBERON:0000915!3.04e-08!17;UBERON:0008947!3.04e-08!17;UBERON:0003258!3.04e-08!17;UBERON:0002048!7.69e-08!14;UBERON:0000117!7.69e-08!14;UBERON:0000171!7.69e-08!14;UBERON:0000170!7.69e-08!14;UBERON:0005597!7.69e-08!14;UBERON:0000118!7.69e-08!14;UBERON:0004923!1.30e-07!24;UBERON:0000945!3.69e-07!16;UBERON:0010039!3.69e-07!16 | |ontology_enrichment_uberon=UBERON:0005409!1.82e-27!59;UBERON:0000160!1.59e-20!43;UBERON:0001007!4.01e-19!128;UBERON:0001555!4.01e-19!128;UBERON:0007026!4.01e-19!128;UBERON:0004119!8.29e-19!130;UBERON:0000925!8.29e-19!130;UBERON:0006595!8.29e-19!130;UBERON:0004921!7.28e-18!126;UBERON:0004185!7.28e-18!126;UBERON:0000344!2.34e-10!15;UBERON:0001242!5.24e-09!13;UBERON:0000060!5.24e-09!13;UBERON:0001262!5.24e-09!13;UBERON:0004786!5.24e-09!13;UBERON:0005178!3.04e-08!17;UBERON:0005181!3.04e-08!17;UBERON:0002224!3.04e-08!17;UBERON:0000915!3.04e-08!17;UBERON:0008947!3.04e-08!17;UBERON:0003258!3.04e-08!17;UBERON:0002048!7.69e-08!14;UBERON:0000117!7.69e-08!14;UBERON:0000171!7.69e-08!14;UBERON:0000170!7.69e-08!14;UBERON:0005597!7.69e-08!14;UBERON:0000118!7.69e-08!14;UBERON:0004923!1.30e-07!24;UBERON:0000945!3.69e-07!16;UBERON:0010039!3.69e-07!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.59e-30,47;UBERON:0000160,5.06e-25,31;UBERON:0001007,5.11e-18,116;UBERON:0001555,5.11e-18,116;UBERON:0007026,5.11e-18,116;UBERON:0004119,2.02e-17,118;UBERON:0000925,2.02e-17,118;UBERON:0006595,2.02e-17,118;UBERON:0004921,1.85e-16,114;UBERON:0000344,1.08e-13,15;UBERON:0001242,1.20e-11,13;UBERON:0001262,1.20e-11,13;UBERON:0004786,1.20e-11,13;UBERON:0002048,2.09e-09,14;UBERON:0000117,2.09e-09,14;UBERON:0000171,2.09e-09,14;UBERON:0000170,2.09e-09,14;UBERON:0005597,2.09e-09,14;UBERON:0000118,2.09e-09,14;UBERON:0005178,2.82e-08,17;UBERON:0005181,2.82e-08,17;UBERON:0002224,2.82e-08,17;UBERON:0000915,2.82e-08,17;UBERON:0008947,2.82e-08,17;UBERON:0003258,2.82e-08,17;UBERON:0003350,2.51e-07,9;UBERON:0004808,2.51e-07,9;UBERON:0001277,2.51e-07,9;UBERON:0005153,3.57e-07,17;UBERON:0004923,5.89e-07,24 | |||
|phase1_expression=0,2.09385244583617,1.36499771816861,0.60492842261366,1.00179145989269,19.9776333575149,21.2587502941928,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0.699561878128147,0,0,0,0.680346321208558,5.06383851124515,3.91799683708403,8.79958325363737,6.8822784320151,4.01962374880514,13.7843838770904,11.2045040996662,18.6222951067246,21.674591159354,26.6076612786366,0,0,0,6.35473563452804,16.4572298904907,10.8209758819056,1.67412652294763,3.1253413780952,1.0470474879476,1.17646297606203,0,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18850937571846,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,1.08245520505607,0.506719730950197,0.505524445014783,3.31133251185274,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,14.9113408974498,0,0,7.40825460104915,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.420883711772948,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,3.96502539580558,5.02456076660734,0.426576501070468,1.16118335930219,1.67527699718721,1.4117846723634,2.66853652613844,2.47293313946327,6.16887780007865,3.95277491337626,4.77536896720512,4.97391180102877,3.31438948102504,2.69645822596266,15.1296634912286,9.55878111620963,0.189667900953082,1.25673363870702,0,0.407302655690628,1.16371492300575,0.280543279561274,1.70738650235495,1.91893192373483,0.627994911365499,0.863780147452604,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0.252578877947112,0,0,8.12914036733061,0.189491411770485,0.488894929326078,2.54617628662782,5.39787571063555,4.52266895092903,5.2369600994923,3.31727201358258,2.83743259391144,1.99318220683897,2.07291199254733,6.22680595919804,4.83517949224508,5.93061140184197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.488660878060728,0.494910368917606,0,0.242780636154981,0.906970670894253,2.45186603682668,0.885905678642318,0.307435147943927,1.55056975900933,2.18120237686503,1.78248689192361,0.948110273807448,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,2.91480836629851,0,0,0.619160603889667,0.370389054739423,0.188368457004691,0.546776910884101,0.228778173206523,0.339956859987711,0.419854356970974,0.276399947608848,110.741791689753,1.42351197111511,3.86306987541013,8.96444328820951,20.2815647134035,18.1240927909327,20.6342449968776,17.6878395252219,52.0894324548219,23.8491550856899,0,2.81846469342095,0,0,0,0,0,0,0,0,0,1.15212002503146,0,0,0.205421914329655,0,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0.453460767230423,0,0,0,4.63655025677257,3.56596703357246,0.915758121336325,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.551530525350042,0.666740183404846,0.824140228955577,0.962757628775446,0.758091635291392,0.25347929989024,0.754505365544305,1.12369808963859,1.02440243847791,0.459483751644906,0,0.927074607558844,0.964546102318525,1.23625770240992,0.883193520806384,1.02860775715625,0.70990322463735,1.43061713968393,0.581385666529314,1.31753132581463,1.18460451048347,0.548783918618318,0.789209134313529,0.679020569229309,0,0.355905054372522,0.985044823755635,0.818462086339379,0.464810523557898,0.385813221962283,0,0,0.644613162144895,0,0,0.231867835620421 | |phase1_expression=0,2.09385244583617,1.36499771816861,0.60492842261366,1.00179145989269,19.9776333575149,21.2587502941928,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0.699561878128147,0,0,0,0.680346321208558,5.06383851124515,3.91799683708403,8.79958325363737,6.8822784320151,4.01962374880514,13.7843838770904,11.2045040996662,18.6222951067246,21.674591159354,26.6076612786366,0,0,0,6.35473563452804,16.4572298904907,10.8209758819056,1.67412652294763,3.1253413780952,1.0470474879476,1.17646297606203,0,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18850937571846,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,1.08245520505607,0.506719730950197,0.505524445014783,3.31133251185274,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,14.9113408974498,0,0,7.40825460104915,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.420883711772948,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,3.96502539580558,5.02456076660734,0.426576501070468,1.16118335930219,1.67527699718721,1.4117846723634,2.66853652613844,2.47293313946327,6.16887780007865,3.95277491337626,4.77536896720512,4.97391180102877,3.31438948102504,2.69645822596266,15.1296634912286,9.55878111620963,0.189667900953082,1.25673363870702,0,0.407302655690628,1.16371492300575,0.280543279561274,1.70738650235495,1.91893192373483,0.627994911365499,0.863780147452604,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0.252578877947112,0,0,8.12914036733061,0.189491411770485,0.488894929326078,2.54617628662782,5.39787571063555,4.52266895092903,5.2369600994923,3.31727201358258,2.83743259391144,1.99318220683897,2.07291199254733,6.22680595919804,4.83517949224508,5.93061140184197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534196811001766,0.488660878060728,0.494910368917606,0,0.242780636154981,0.906970670894253,2.45186603682668,0.885905678642318,0.307435147943927,1.55056975900933,2.18120237686503,1.78248689192361,0.948110273807448,1.05418608574999,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,2.91480836629851,0,0,0.619160603889667,0.370389054739423,0.188368457004691,0.546776910884101,0.228778173206523,0.339956859987711,0.419854356970974,0.276399947608848,110.741791689753,1.42351197111511,3.86306987541013,8.96444328820951,20.2815647134035,18.1240927909327,20.6342449968776,17.6878395252219,52.0894324548219,23.8491550856899,0,2.81846469342095,0,0,0,0,0,0,0,0,0,1.15212002503146,0,0,0.205421914329655,0,0.358053391334963,0.198681354781265,0,0,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0.233753804363138,0.453460767230423,0,0,0,4.63655025677257,3.56596703357246,0.915758121336325,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.551530525350042,0.666740183404846,0.824140228955577,0.962757628775446,0.758091635291392,0.25347929989024,0.754505365544305,1.12369808963859,1.02440243847791,0.459483751644906,0,0.927074607558844,0.964546102318525,1.23625770240992,0.883193520806384,1.02860775715625,0.70990322463735,1.43061713968393,0.581385666529314,1.31753132581463,1.18460451048347,0.548783918618318,0.789209134313529,0.679020569229309,0,0.355905054372522,0.985044823755635,0.818462086339379,0.464810523557898,0.385813221962283,0,0,0.644613162144895,0,0,0.231867835620421 | ||
|short_description=p1@1110017F19Rik | |short_description=p1@1110017F19Rik | ||
}} | }} |
Latest revision as of 23:34, 26 September 2015
Short description: | p1@1110017F19Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1110017F19Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:306 |
Association with transcript: | 298bp_to_ENSMUST00000132961, NM_001162998, uc011yhr.1_5end |
EntrezGene: | 1110017F19Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.51e-07 | 9 |
epithelial cell of alimentary canal | 2.51e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.59e-30 | 47 |
intestine | 5.06e-25 | 31 |
digestive system | 5.11e-18 | 116 |
digestive tract | 5.11e-18 | 116 |
primitive gut | 5.11e-18 | 116 |
endoderm-derived structure | 2.02e-17 | 118 |
endoderm | 2.02e-17 | 118 |
presumptive endoderm | 2.02e-17 | 118 |
subdivision of digestive tract | 1.85e-16 | 114 |
mucosa | 1.08e-13 | 15 |
intestinal mucosa | 1.20e-11 | 13 |
wall of intestine | 1.20e-11 | 13 |
gastrointestinal system mucosa | 1.20e-11 | 13 |
lung | 2.09e-09 | 14 |
respiratory tube | 2.09e-09 | 14 |
respiration organ | 2.09e-09 | 14 |
pair of lungs | 2.09e-09 | 14 |
lung primordium | 2.09e-09 | 14 |
lung bud | 2.09e-09 | 14 |
thoracic cavity element | 2.82e-08 | 17 |
thoracic segment organ | 2.82e-08 | 17 |
thoracic cavity | 2.82e-08 | 17 |
thoracic segment of trunk | 2.82e-08 | 17 |
respiratory primordium | 2.82e-08 | 17 |
endoderm of foregut | 2.82e-08 | 17 |
epithelium of mucosa | 2.51e-07 | 9 |
gastrointestinal system epithelium | 2.51e-07 | 9 |
intestinal epithelium | 2.51e-07 | 9 |
epithelial bud | 3.57e-07 | 17 |
organ component layer | 5.89e-07 | 24 |