FFCP PHASE1:Mm9::chr11:109583662..109583674,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=208659 | |EntrezGene=208659 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=157 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CID3 | |UniProt=Q8CID3 | ||
|association_with_transcript=-69bp_to_ENSMUST00000155559_5end | |association_with_transcript=-69bp_to_ENSMUST00000155559_5end | ||
|cluster_id=chr11:109583662..109583674,- | |||
|description=CAGE_peak_7_at_Fam20a_5end | |description=CAGE_peak_7_at_Fam20a_5end | ||
|id=chr11:109583662..109583674,- | |id=chr11:109583662..109583674,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002092,2.58e-08,3;CL:0002540,2.58e-08,3;CL:0000213,3.59e-07,1;CL:0002078,3.59e-07,1;CL:0000115,3.59e-07,1;CL:0002262,3.59e-07,1;CL:1000398,3.59e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.72e-13,25;UBERON:0002330,1.72e-13,25;UBERON:0001911,7.08e-13,2;UBERON:0000076,7.08e-13,2;UBERON:0005333,7.08e-13,2;UBERON:0008425,7.08e-13,2;UBERON:0005311,7.08e-13,2;UBERON:0002107,1.24e-08,22;UBERON:0007499,1.24e-08,22;UBERON:0006925,1.24e-08,22;UBERON:0009497,1.24e-08,22;UBERON:0000015,1.24e-08,22;UBERON:0002423,1.24e-08,22;UBERON:0006235,1.24e-08,22;UBERON:0008835,1.24e-08,22;UBERON:0003894,1.24e-08,22;UBERON:0004161,1.24e-08,22;UBERON:0008836,1.24e-08,22;UBERON:0009854,3.07e-08,23;UBERON:0009856,3.07e-08,23;UBERON:0002394,3.59e-07,1;UBERON:0001281,3.59e-07,1;UBERON:0000353,3.59e-07,1;UBERON:0003497,3.59e-07,1;UBERON:0003909,3.59e-07,1;UBERON:0003928,3.59e-07,1;UBERON:0003835,3.59e-07,1;UBERON:0003513,3.59e-07,1;UBERON:0001280,3.59e-07,1;UBERON:0004647,3.59e-07,1;UBERON:0002294,3.59e-07,1;UBERON:0001173,3.59e-07,1;UBERON:0004912,3.59e-07,1;UBERON:0005171,3.59e-07,1 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,1.02903774414379,0.286533439938757,0,0.202316460859598,0,0,0,0,1.3498495759221,1.97773272513395,0.7104801149461,0.898800331555214,0,0,0.135005938331691,0,0.571301968807607,1.10434270475807,0.122490799214954,0,0,0,0.127687338085188,0,0.131886287730194,0.182975287204819,0,0,0,0.30559649555362,0,0.569486723196412,0.186399445825301,0,0.226714680320357,3.18850937571846,0,0,0.539703191637817,0,0,0,2.21559419351475,0.779358013808606,1.41335829804136,0.563373679106722,0,2.54805239706646,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0.251333182659351,0,0.144599356919912,0,0,0.441683036920787,0,0,0.292780797011547,0.41889341362691,0.766371165625774,0,0,0,0.748953197024114,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0.438599962275997,0.219550115291051,0,0.210289948564127,0.205809224758569,1.65209391491899,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0.398282546508734,0.189667900953082,0,0,0,0,0.210407459670956,0.316182685621286,0,0,0.123397163921801,0,0,0.393117990226406,0.449724224769707,0,1.20588579876208,1.01850340712568,1.43848068725405,2.43202840162553,1.09824565275233,0,0.744281895337007,0.624075346229121,0.252578877947112,0.358794827043824,0.482443521363367,0.369506380333209,0.189491411770485,0,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0,0.172684981865896,0.433947175744535,0,0,16.2282210096282,25.3861806600354,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0.906921534460845,0,0,0,0,0.375364950902364,0.36630324853453,0.857473516316263,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0.476872379894642,0.290692833264657,0.376437521661322,0.338458431566706,0,0.789209134313529,0,0,0,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0,0.463735671240843 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,1.02903774414379,0.286533439938757,0,0.202316460859598,0,0,0,0,1.3498495759221,1.97773272513395,0.7104801149461,0.898800331555214,0,0,0.135005938331691,0,0.571301968807607,1.10434270475807,0.122490799214954,0,0,0,0.127687338085188,0,0.131886287730194,0.182975287204819,0,0,0,0.30559649555362,0,0.569486723196412,0.186399445825301,0,0.226714680320357,3.18850937571846,0,0,0.539703191637817,0,0,0,2.21559419351475,0.779358013808606,1.41335829804136,0.563373679106722,0,2.54805239706646,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0.251333182659351,0,0.144599356919912,0,0,0.441683036920787,0,0,0.292780797011547,0.41889341362691,0.766371165625774,0,0,0,0.748953197024114,0,0.125654352112864,0,0.255715457330331,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0.438599962275997,0.219550115291051,0,0.210289948564127,0.205809224758569,1.65209391491899,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0.398282546508734,0.189667900953082,0,0,0,0,0.210407459670956,0.316182685621286,0,0,0.123397163921801,0,0,0.393117990226406,0.449724224769707,0,1.20588579876208,1.01850340712568,1.43848068725405,2.43202840162553,1.09824565275233,0,0.744281895337007,0.624075346229121,0.252578877947112,0.358794827043824,0.482443521363367,0.369506380333209,0.189491411770485,0,0,0,0,0,0.390267295715598,0,0,0.159454768657487,0,0.172684981865896,0.433947175744535,0,0,16.2282210096282,25.3861806600354,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0.291480836629851,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0.906921534460845,0,0,0,0,0.375364950902364,0.36630324853453,0.857473516316263,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0.476872379894642,0.290692833264657,0.376437521661322,0.338458431566706,0,0.789209134313529,0,0,0,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.233931608445408,0.429742108096597,0.57386499620653,0,0.463735671240843 | ||
|short_description=p7@Fam20a | |short_description=p7@Fam20a | ||
}} | }} |
Latest revision as of 21:48, 26 September 2015
Short description: | p7@Fam20a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Fam20a_5end |
Coexpression cluster: | MCL_coexpression_mm9:157 |
Association with transcript: | -69bp_to_ENSMUST00000155559_5end |
EntrezGene: | Fam20a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 2.58e-08 | 3 |
mesenchymal stem cell of the bone marrow | 2.58e-08 | 3 |
lining cell | 3.59e-07 | 1 |
meso-epithelial cell | 3.59e-07 | 1 |
endothelial cell | 3.59e-07 | 1 |
endothelial cell of sinusoid | 3.59e-07 | 1 |
endothelial cell of hepatic sinusoid | 3.59e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.72e-13 | 25 |
exocrine system | 1.72e-13 | 25 |
mammary gland | 7.08e-13 | 2 |
external ectoderm | 7.08e-13 | 2 |
mammary bud | 7.08e-13 | 2 |
mammary ridge | 7.08e-13 | 2 |
mammary placode | 7.08e-13 | 2 |
liver | 1.24e-08 | 22 |
epithelial sac | 1.24e-08 | 22 |
digestive gland | 1.24e-08 | 22 |
epithelium of foregut-midgut junction | 1.24e-08 | 22 |
anatomical boundary | 1.24e-08 | 22 |
hepatobiliary system | 1.24e-08 | 22 |
foregut-midgut junction | 1.24e-08 | 22 |
hepatic diverticulum | 1.24e-08 | 22 |
liver primordium | 1.24e-08 | 22 |
septum transversum | 1.24e-08 | 22 |
liver bud | 1.24e-08 | 22 |
digestive tract diverticulum | 3.07e-08 | 23 |
sac | 3.07e-08 | 23 |
bile duct | 3.59e-07 | 1 |
hepatic sinusoid | 3.59e-07 | 1 |
parenchyma | 3.59e-07 | 1 |
abdomen blood vessel | 3.59e-07 | 1 |
sinusoid | 3.59e-07 | 1 |
digestive system duct | 3.59e-07 | 1 |
abdominal segment blood vessel | 3.59e-07 | 1 |
trunk blood vessel | 3.59e-07 | 1 |
liver parenchyma | 3.59e-07 | 1 |
liver lobule | 3.59e-07 | 1 |
biliary system | 3.59e-07 | 1 |
biliary tree | 3.59e-07 | 1 |
biliary bud | 3.59e-07 | 1 |
hepatic duct | 3.59e-07 | 1 |