FFCP PHASE1:Hg19::chr12:71551652..71551663,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7103 | |EntrezGene=7103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11855 | |HGNC=11855 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000546561_5end | |association_with_transcript=15bp_to_ENST00000546561_5end | ||
|cluster_id=chr12:71551652..71551663,- | |||
|description=CAGE_peak_10_at_TSPAN8_5end | |description=CAGE_peak_10_at_TSPAN8_5end | ||
|id=chr12:71551652..71551663,- | |id=chr12:71551652..71551663,- | ||
|ontology_enrichment_celltype=CL:1000306!1.35e-14!4;CL:0002547!1.35e-14!4;CL:0000359!1.96e-11!32;CL:0002592!2.05e-11!3;CL:0002150!5.28e-11!3;CL:0000861!5.28e-11!3;CL:0000192!3.64e-08!42;CL:0000514!3.64e-08!42;CL:0002595!1.83e-07!5 | |ontology_enrichment_celltype=CL:1000306!1.35e-14!4;CL:0002547!1.35e-14!4;CL:0000359!1.96e-11!32;CL:0002592!2.05e-11!3;CL:0002150!5.28e-11!3;CL:0000861!5.28e-11!3;CL:0000192!3.64e-08!42;CL:0000514!3.64e-08!42;CL:0002595!1.83e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002595;1.27e-14;5!CL:0000359;1.39e-10;32!CL:0002553;5.31e-09;1!CL:0002591;9.53e-09;1!CL:1000306;1.80e-08;4!CL:0002547;1.80e-08;4!CL:0000192;2.60e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.00e-14,5;CL:0000359,4.96e-11,32;CL:0002553,6.22e-09,1;CL:0002591,9.91e-09,1;CL:1000306,1.70e-08,4;CL:0002547,1.70e-08,4;CL:0000192,5.26e-08,43;CL:0000514,5.26e-08,43 | |||
|ontology_enrichment_development_v019=UBERON:0001045;9.53e-09;1!UBERON:0006242;9.53e-09;1!CL:0000514;2.60e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000160;7.04e-34;17!UBERON:0005409;2.57e-32;22!UBERON:0004921;5.23e-18;33!UBERON:0000059;1.12e-17;11!UBERON:0002108;1.00e-14;4!UBERON:0003834;1.27e-14;5!UBERON:0001533;1.27e-14;5!UBERON:0001155;3.06e-14;9!UBERON:0004573;3.05e-12;33!UBERON:0004571;3.05e-12;33!UBERON:0001637;4.73e-12;42!UBERON:0003509;4.73e-12;42!UBERON:0004572;4.73e-12;42!UBERON:0003513;1.34e-10;7!UBERON:0001154;9.53e-09;1!UBERON:0001153;9.53e-09;1!UBERON:0009854;9.53e-09;1!UBERON:0004797;1.80e-08;4!UBERON:0000415;1.80e-08;4!UBERON:0007240;1.80e-08;4!UBERON:0005742;1.80e-08;4!UBERON:0005734;1.80e-08;4!UBERON:0004664;1.80e-08;4!UBERON:0004663;1.80e-08;4!UBERON:0004907;6.09e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.47e-34,17;UBERON:0005409,2.18e-28,25;UBERON:0000059,1.27e-17,11;UBERON:0002108,9.14e-15,4;UBERON:0003834,1.00e-14,5;UBERON:0001533,1.00e-14,5;UBERON:0001155,3.12e-14,9;UBERON:0004573,7.17e-14,33;UBERON:0004571,7.17e-14,33;UBERON:0001637,1.98e-13,42;UBERON:0003509,1.98e-13,42;UBERON:0004572,1.98e-13,42;UBERON:0003513,1.14e-10,7;UBERON:0007500,3.57e-09,59;UBERON:0001981,3.57e-09,59;UBERON:0004537,3.57e-09,59;UBERON:0006965,3.57e-09,59;UBERON:0001154,9.17e-09,1;UBERON:0001153,9.17e-09,1;UBERON:0001045,9.17e-09,1;UBERON:0004921,1.22e-08,118;UBERON:0000415,1.70e-08,4;UBERON:0007240,1.70e-08,4;UBERON:0005742,1.70e-08,4;UBERON:0005734,1.70e-08,4;UBERON:0004664,1.70e-08,4;UBERON:0004663,1.70e-08,4;UBERON:0001007,8.73e-08,145;UBERON:0001555,8.73e-08,145;UBERON:0007026,8.73e-08,145;UBERON:0000055,8.78e-08,68;UBERON:0003498,4.04e-07,5;UBERON:0005985,4.04e-07,5;UBERON:0004907,6.56e-07,5;UBERON:0004119,7.95e-07,160;UBERON:0000925,7.95e-07,160;UBERON:0006595,7.95e-07,160 | |||
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| ||
|short_description=p10@TSPAN8 | |short_description=p10@TSPAN8 | ||
}} | }} |
Latest revision as of 16:37, 24 September 2015
Short description: | p10@TSPAN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TSPAN8_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000546561_5end |
EntrezGene: | TSPAN8 |
HGNC: | 11855 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.00e-14 | 5 |
vascular associated smooth muscle cell | 4.96e-11 | 32 |
lung fibroblast | 6.22e-09 | 1 |
smooth muscle cell of the pulmonary artery | 9.91e-09 | 1 |
fibroblast of tunica adventitia of artery | 1.70e-08 | 4 |
fibroblast of the aortic adventitia | 1.70e-08 | 4 |
smooth muscle cell | 5.26e-08 | 43 |
smooth muscle myoblast | 5.26e-08 | 43 |