Personal tools

FFCP PHASE1:Mm9::chr1:127332009..127332021,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74117
|EntrezGene=74117
|HGNC=
|HGNC=
|MCL_coexpression_id=1175
|TSSclassifier=NA
|UniProt=Q99JY9,Q641P0
|UniProt=Q99JY9,Q641P0
|association_with_transcript=45bp_to_ENSMUST00000027579,uc007cke.1_5end
|association_with_transcript=45bp_to_ENSMUST00000027579,uc007cke.1_5end
|cluster_id=chr1:127332009..127332021,-
|description=CAGE_peak_4_at_Actr3_5end
|description=CAGE_peak_4_at_Actr3_5end
|id=chr1:127332009..127332021,-
|id=chr1:127332009..127332021,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!1.50e-12!59;UBERON:0004923!2.14e-10!24;UBERON:0000160!8.17e-10!43;UBERON:0000344!4.83e-09!15;UBERON:0001242!7.50e-08!13;UBERON:0000060!7.50e-08!13;UBERON:0001262!7.50e-08!13;UBERON:0004786!7.50e-08!13;UBERON:0004872!3.04e-07!33;UBERON:0004119!9.40e-07!130;UBERON:0000925!9.40e-07!130;UBERON:0006595!9.40e-07!130
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.14e-13,47;UBERON:0000160,2.63e-11,31;UBERON:0004923,2.13e-10,24;UBERON:0000344,4.82e-09,15;UBERON:0001242,7.49e-08,13;UBERON:0001262,7.49e-08,13;UBERON:0004786,7.49e-08,13;UBERON:0004872,3.04e-07,33
|phase1_expression=2.5623815536767,39.4342210632478,36.3999391511629,16.6355316218757,19.5349334679075,20.8170297170743,17.0537227634734,2.7115897922731,1.97104211012333,2.34064526321993,1.02730780935303,1.03703806693937,3.93761678841773,2.44777126773193,3.99731714178795,2.83465374345756,2.79824751251259,11.5143690355757,8.22686601634433,9.76096199135469,2.29616883407888,7.04965753526286,4.4403964153619,24.1588558418044,21.3350631392468,32.7312219545562,24.9841957772263,32.5361561355692,24.7030445293286,28.983464922392,23.5034341294623,0,0,0,7.79899373328441,6.64938581433969,7.9626048942324,46.8755426425337,53.9121387721422,57.064088093144,48.2349820185432,48.4962294320496,57.7757320107073,6.54663453473002,6.08261587317087,6.60768307782054,0.782391344348039,2.8343270329458,4.61340983742391,6.41618666945135,4.33957907038624,0,8.05356509077134,5.07753499407941,5.71359458542189,7.20326420900652,8.30946975822394,8.25075347643908,2.83243045203437,1.05798195854407,1.90149421051854,8.13226876965917,3.55717918444456,7.64914759689189,7.9109309005358,11.3676818391376,3.29560121570245,2.68952813725088,1.65903379693564,1.21505344498522,1.68259969081106,3.42781181284564,0.441737081903227,1.10241719293459,1.34183659425531,0,3.30347642998166,3.44755812830007,1.99688493233117,1.84640802822271,2.56165402086747,1.56274011167028,2.23346399201105,0.56276261003168,1.22238598221448,1.47314292736834,2.13557521198654,2.60959224155421,11.510381386644,8.08615693142605,5.2175607966302,2.58127163094416,3.39985666853875,2.15881276655127,4.54843492213368,4.48026887097336,4.63466586434781,10.9075406449957,10.9110121933205,7.0667914902068,2.67602497575693,6.41632387071589,7.64415719119937,0,6.49473123033642,4.81383744402687,6.0662933401774,7.9928715803342,15.018397251536,3.11728492036132,2.25530924795977,3.65358573974569,3.45923245884088,2.56228488939458,2.93971767839262,5.02666365318702,14.3373081285937,6.79616977523585,8.84610551949874,8.25010934731787,6.18356251689102,4.84875253135222,5.59175283654366,4.09893115816166,2.72280718857492,15.5828803677241,12.9400334466394,11.3981518888747,12.0716715719411,1.64769703345305,1.83000241127451,1.13088916901578,1.39059456153821,2.81287003063364,1.87009240103604,2.92034273521964,3.7680564624617,7.96204611904595,3.53811861807145,2.52530227063769,2.21204753036596,3.21862946206862,2.52086981727489,2.86339153887859,2.38127747029647,1.2811372028485,2.62364828767241,2.84573707812917,1.5089759505299,2.45837904218165,1.75951124163949,2.41115305670332,1.66828349535359,5.92028683087683,4.52720700097476,1.39323986772945,16.1509033082044,13.3820911699652,14.4923384691752,7.66365358381357,4.69052119962192,6.84235833551856,8.75955521665278,6.88674811115913,8.79322543458056,9.06882384526591,6.43856163359086,13.077718345123,12.1774288935976,9.19337798842933,7.86367452594801,6.28659945928929,8.12335426576887,5.09984391289413,2.52347938276953,1.9551876352064,28.7464341195904,2.64450566663544,3.83918850963421,4.18026009348789,4.63922860759536,5.84882221407693,8.00560957841533,8.94060442729028,14.2358718463353,9.55253937399263,12.0640900224129,9.94782360205754,10.9179888786707,15.2799299471218,16.4264917904768,16.7278669533668,2.65535061334314,3.42745537829186,4.50830942692322,3.25842124552503,3.49114476901726,5.75113723100612,5.24863258131335,5.01874503130647,9.26292494264111,7.77402132707343,3.85388415213294,2.00214126859313,2.35870794135844,2.02375901146368,5.07150303471257,3.61765739628625,3.05551022137704,5.17853047411459,6.32327384422638,4.94210543738547,5.75072826109418,5.20997326735905,5.92871578917665,5.05157755894223,4.30553792452589,3.85954817090694,6.28160846566456,4.35830247072115,4.4000543639347,3.22515662972857,4.45911471748154,5.86271901046355,5.95109102215034,8.00047956216975,7.40885177299098,7.75126413770712,8.13219320153184,9.01248230936559,10.5337838938196,6.65385669474953,19.6028669121054,25.5635671394793,6.39293554924747,6.34654516500885,0.80275294993896,3.16471553798949,6.06559297893699,2.52470927204373,4.41711507182759,1.95219372148319,4.09304455692318,6.21318874676635,2.89638276307112,3.96307143104365,2.42886421004937,5.55286130031493,3.16230222357219,0.642642632843614,2.98074178937364,3.20518086601059,4.0721739838394,4.94910368917606,6.63725691699814,4.37005145078967,5.74414758233027,5.28094223316515,4.72483028609236,4.91896236710284,9.56184684722418,6.18007340111759,6.06045543254026,3.79244109522979,2.10837217149998,2.06271086496374,2.38307724027652,3.06103859853227,1.16422815404479,2.57204442037911,3.72414490648775,3.21063871683727,2.79733335023606,2.13125464380219,11.2642419870581,8.89694697628045,9.2621927183084,4.45192882941996,3.22928853391811,4.94565984410878,3.81991500810037,4.10352249362653,14.5740418314925,2.03967832211561,8.20180227829693,4.74689796315412,5.92622487583077,5.27431679613135,6.69801715833023,7.54967971581525,9.68877050964975,5.03825228365169,7.73919853304773,11.4560474161814,2.84702394223022,3.86306987541013,5.72428306355547,8.36353184057875,6.76923947613151,9.03591120778299,9.50514740841363,9.6849698534091,17.3684064211002,4.97071450469541,1.69107881605257,2.39226473670366,0.992750942742586,1.75006069509643,2.58319646955462,1.68956125490778,2.46450201156083,2.3436789271911,3.77493639932559,0.966336483304024,0.864090018773596,2.52808896502543,2.43270258348197,2.2596410576262,1.94881234466693,2.50637373934474,1.78813219303138,2.76449533895928,1.47689527174577,1.61546319917036,1.905170166375,2.11734988787365,3.02119430293232,1.53938946624527,1.98690733708667,3.40095575422817,0.887943813496259,3.3194126945506,4.86865387455827,7.53439416725543,10.1348536743638,7.69236821922513,11.5758924702696,4.51414893631827,0.564751842617067,1.38097570952153,0,2.40594455281163,1.37016503954128,2.2661816921691,0.675022500231806,0.45032120322422,0.906284817968409,3.10656187051092,2.38710899443606,2.79317411380722,2.56100408631201,2.18796045361465,3.5634237646757,3.8607136774503,4.4449345560323,4.32673620201678,1.92551525755089,4.80124702351215,4.30914809813408,4.14977951049368,3.65201879132541,4.67383612555546,4.65227298540468,3.81034953026459,4.05595140806994,2.89363830695558,3.29668720642645,4.26876868389752,2.40008476669791,3.90446773550542,3.33810665926249,2.32554266611726,3.76437521661322,3.72304274723377,3.65855945745545,3.41990624869196,4.48153575691344,3.36685362994643,4.86403574309114,4.13718825977367,3.27384834535751,3.87342102964915,3.08650577569826,1.99848462350357,4.21076895201735,4.72716318906256,6.12122662620299,5.07360263974886,6.02856372613096
|phase1_expression=2.5623815536767,39.4342210632478,36.3999391511629,16.6355316218757,19.5349334679075,20.8170297170743,17.0537227634734,2.7115897922731,1.97104211012333,2.34064526321993,1.02730780935303,1.03703806693937,3.93761678841773,2.44777126773193,3.99731714178795,2.83465374345756,2.79824751251259,11.5143690355757,8.22686601634433,9.76096199135469,2.29616883407888,7.04965753526286,4.4403964153619,24.1588558418044,21.3350631392468,32.7312219545562,24.9841957772263,32.5361561355692,24.7030445293286,28.983464922392,23.5034341294623,0,0,0,7.79899373328441,6.64938581433969,7.9626048942324,46.8755426425337,53.9121387721422,57.064088093144,48.2349820185432,48.4962294320496,57.7757320107073,6.54663453473002,6.08261587317087,6.60768307782054,0.782391344348039,2.8343270329458,4.61340983742391,6.41618666945135,4.33957907038624,0,8.05356509077134,5.07753499407941,5.71359458542189,7.20326420900652,8.30946975822394,8.25075347643908,2.83243045203437,1.05798195854407,1.90149421051854,8.13226876965917,3.55717918444456,7.64914759689189,7.9109309005358,11.3676818391376,3.29560121570245,2.68952813725088,1.65903379693564,1.21505344498522,1.68259969081106,3.42781181284564,0.441737081903227,1.10241719293459,1.34183659425531,0,3.30347642998166,3.44755812830007,1.99688493233117,1.84640802822271,2.56165402086747,1.56274011167028,2.23346399201105,0.56276261003168,1.22238598221448,1.47314292736834,2.13557521198654,2.60959224155421,11.510381386644,8.08615693142605,5.2175607966302,2.58127163094416,3.39985666853875,2.15881276655127,4.54843492213368,4.48026887097336,4.63466586434781,10.9075406449957,10.9110121933205,7.0667914902068,2.67602497575693,6.41632387071589,7.64415719119937,0,6.49473123033642,4.81383744402687,6.0662933401774,7.9928715803342,15.018397251536,3.11728492036132,2.25530924795977,3.65358573974569,3.45923245884088,2.56228488939458,2.93971767839262,5.02666365318702,14.3373081285937,6.79616977523585,8.84610551949874,8.25010934731787,6.18356251689102,4.84875253135222,5.59175283654366,4.09893115816166,2.72280718857492,15.5828803677241,12.9400334466394,11.3981518888747,12.0716715719411,1.64769703345305,1.83000241127451,1.13088916901578,1.39059456153821,2.81287003063364,1.87009240103604,2.92034273521964,3.7680564624617,7.96204611904595,3.53811861807145,2.52530227063769,2.21204753036596,3.21862946206862,2.52086981727489,2.86339153887859,2.38127747029647,1.2811372028485,2.62364828767241,2.84573707812917,1.5089759505299,2.45837904218165,1.75951124163949,2.41115305670332,1.66828349535359,5.92028683087683,4.52720700097476,1.39323986772945,16.1509033082044,13.3820911699652,14.4923384691752,7.66365358381357,4.69052119962192,6.84235833551856,8.75955521665278,6.88674811115913,8.79322543458056,9.06882384526591,6.43856163359086,13.077718345123,12.1774288935976,9.19337798842933,7.86367452594801,6.28659945928929,8.12335426576887,5.09984391289413,2.52347938276953,1.9551876352064,28.7464341195904,2.64450566663544,3.83918850963421,4.18026009348789,4.63922860759536,5.84882221407693,8.00560957841533,8.94060442729028,14.2358718463353,9.55253937399263,12.0640900224129,9.94782360205754,10.9179888786707,15.2799299471218,16.4264917904768,16.7278669533668,2.65535061334314,3.42745537829186,4.50830942692322,3.25842124552503,3.49114476901726,5.75113723100612,5.24863258131335,5.01874503130647,9.26292494264111,7.77402132707343,3.85388415213294,2.00214126859313,2.35870794135844,2.02375901146368,5.07150303471257,3.61765739628625,3.05551022137704,5.17853047411459,6.32327384422638,4.94210543738547,5.75072826109418,5.20997326735905,5.92871578917665,5.05157755894223,4.30553792452589,3.85954817090694,6.28160846566456,4.35830247072115,4.4000543639347,3.22515662972857,4.45911471748154,5.86271901046355,5.95109102215034,8.00047956216975,7.40885177299098,7.75126413770712,8.13219320153184,9.01248230936559,10.5337838938196,6.65385669474953,19.6028669121054,25.5635671394793,6.39293554924747,6.34654516500885,0.80275294993896,3.16471553798949,6.06559297893699,2.52470927204373,4.41711507182759,1.95219372148319,4.09304455692318,6.21318874676635,2.89638276307112,3.96307143104365,2.42886421004937,5.55286130031493,3.16230222357219,0.642642632843614,2.98074178937364,3.20518086601059,4.0721739838394,4.94910368917606,6.63725691699814,4.37005145078967,5.74414758233027,5.28094223316515,4.72483028609236,4.91896236710284,9.56184684722418,6.18007340111759,6.06045543254026,3.79244109522979,2.10837217149998,2.06271086496374,2.38307724027652,3.06103859853227,1.16422815404479,2.57204442037911,3.72414490648775,3.21063871683727,2.79733335023606,2.13125464380219,11.2642419870581,8.89694697628045,9.2621927183084,4.45192882941996,3.22928853391811,4.94565984410878,3.81991500810037,4.10352249362653,14.5740418314925,2.03967832211561,8.20180227829693,4.74689796315412,5.92622487583077,5.27431679613135,6.69801715833023,7.54967971581525,9.68877050964975,5.03825228365169,7.73919853304773,11.4560474161814,2.84702394223022,3.86306987541013,5.72428306355547,8.36353184057875,6.76923947613151,9.03591120778299,9.50514740841363,9.6849698534091,17.3684064211002,4.97071450469541,1.69107881605257,2.39226473670366,0.992750942742586,1.75006069509643,2.58319646955462,1.68956125490778,2.46450201156083,2.3436789271911,3.77493639932559,0.966336483304024,0.864090018773596,2.52808896502543,2.43270258348197,2.2596410576262,1.94881234466693,2.50637373934474,1.78813219303138,2.76449533895928,1.47689527174577,1.61546319917036,1.905170166375,2.11734988787365,3.02119430293232,1.53938946624527,1.98690733708667,3.40095575422817,0.887943813496259,3.3194126945506,4.86865387455827,7.53439416725543,10.1348536743638,7.69236821922513,11.5758924702696,4.51414893631827,0.564751842617067,1.38097570952153,0,2.40594455281163,1.37016503954128,2.2661816921691,0.675022500231806,0.45032120322422,0.906284817968409,3.10656187051092,2.38710899443606,2.79317411380722,2.56100408631201,2.18796045361465,3.5634237646757,3.8607136774503,4.4449345560323,4.32673620201678,1.92551525755089,4.80124702351215,4.30914809813408,4.14977951049368,3.65201879132541,4.67383612555546,4.65227298540468,3.81034953026459,4.05595140806994,2.89363830695558,3.29668720642645,4.26876868389752,2.40008476669791,3.90446773550542,3.33810665926249,2.32554266611726,3.76437521661322,3.72304274723377,3.65855945745545,3.41990624869196,4.48153575691344,3.36685362994643,4.86403574309114,4.13718825977367,3.27384834535751,3.87342102964915,3.08650577569826,1.99848462350357,4.21076895201735,4.72716318906256,6.12122662620299,5.07360263974886,6.02856372613096
|short_description=p4@Actr3
|short_description=p4@Actr3
}}
}}

Latest revision as of 07:00, 26 September 2015

Short description:p4@Actr3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Actr3_5end
Coexpression cluster:MCL_coexpression_mm9:1175
Association with transcript: 45bp_to_ENSMUST00000027579, uc007cke.1_5end
EntrezGene:Actr3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Actr3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I539.43
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I636.40
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.64
CD326+ enterocyte, pool2.CNhs13197.11849-124I419.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I720.82
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.05
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.76
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.05
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D124.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D221.34
GP2+ M cell, pool1.CNhs13228.11845-124H932.73
GP2+ M cell, pool2.CNhs13231.11846-124I124.98
GP2+ M cell, pool3.CNhs13240.11847-124I232.54
Ileum epithelium, pool1.CNhs13199.10252-104B924.70
Ileum epithelium, pool2.CNhs13232.10253-104C128.98
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C823.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.96
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G846.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H153.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H357.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G948.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H248.50
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H457.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.55
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.08
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.61
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.05
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.20
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.31
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C58.25
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.13
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D911.51
Mouse Schwann, donor2.CNhs12573.11746-123F98.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.49
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.99
accessory axillary lymph node, adult.CNhs10475.1063-29H915.02
adrenal gland, adult.CNhs10508.49-24D73.12
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C12.94
adrenal gland, neonate N25.CNhs11223.1377-27I35.03
amnion, adult pregnant day17.5.CNhs10488.583-22A814.34
aorta, adult.CNhs10498.46-23H16.80
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F58.25
bone (os femoris), neonate N16.CNhs11225.1525-43A66.18
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H715.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.07
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.96
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B54.53
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.15
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.38
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D514.49
heart, embryo E11.CNhs10586.331-24E97.66
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I96.84
heart, embryo E14.CNhs10597.403-26D48.76
heart, embryo E15.CNhs11017.431-16C86.89
heart, embryo E16.CNhs11021.457-17C68.79
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G36.44
heart, neonate N00.CNhs11213.639-21E313.08
heart, neonate N03.CNhs11221.1349-25I212.18
heart, neonate N10.CNhs11118.749-24G19.19
heart, neonate N16.CNhs11209.782-15G17.86
heart, neonate N20.CNhs11127.821-26I66.29
heart, neonate N25.CNhs11196.1351-25D38.12
heart, neonate N30.CNhs11202.1390-42D25.10
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I328.75
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D84.64
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D38.01
intestine, embryo E18.CNhs10526.1289-20F78.94
intestine, neonate N00.CNhs11126.644-26D114.24
intestine, neonate N01.CNhs11192.1322-23E99.55
intestine, neonate N06.CNhs11102.688-20B812.06
intestine, neonate N07.CNhs11095.720-20F29.95
intestine, neonate N10.CNhs11098.755-23A510.92
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E316.43
intestine, neonate N30.CNhs11131.1384-42G116.73
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G75.75
kidney, neonate N10.CNhs11206.758-6D55.25
kidney, neonate N20.CNhs11113.832-19I15.02
kidney, neonate N25.CNhs11122.1353-25F39.26
kidney, neonate N30.CNhs11203.1385-42H17.77
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D75.07
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F46.32
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H14.31
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B64.46
lung, embryo E17.CNhs10605.480-44A65.86
lung, embryo E18.CNhs10583.1287-20I65.95
lung, neonate N00.CNhs11224.640-42C68.00
lung, neonate N06.CNhs11212.683-20E57.41
lung, neonate N07.CNhs11111.715-19A37.75
lung, neonate N10.CNhs11219.750-23E68.13
lung, neonate N20.CNhs11109.822-18A49.01
lung, neonate N25.CNhs11119.1359-25C710.53
lung, neonate N30.CNhs11133.1394-42H26.65
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A119.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A125.56
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.21
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.96
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G64.95
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I74.92
pancreas, neonate N00.CNhs11105.645-26G99.56
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I711.26
placenta, adult pregnant day17.CNhs10464.577-18G38.90
prostate, adult.CNhs10470.859-1F89.26
skin, adult.CNhs10492.30-1C34.45
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H34.95
skin, neonate N06.CNhs11097.693-20I53.82
skin, neonate N10.CNhs11108.762-6C44.10
small intestine, neonate N16.CNhs11114.790-21I114.57
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G28.20
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F25.93
spleen, neonate N10.CNhs11116.752-24D15.27
spleen, neonate N20.CNhs11112.824-19H16.70
spleen, neonate N25.CNhs11099.1354-25G37.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.74
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D45.72
stomach, embryo E17.CNhs11006.1035-18D58.36
stomach, embryo E18.CNhs10999.1286-20C66.77
stomach, neonate N03.CNhs11193.1340-24B89.04
stomach, neonate N07.CNhs11210.718-18A99.51
stomach, neonate N25.CNhs11104.1355-25E49.68
stomach, neonate N30.CNhs11134.1386-42I117.37
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D93.77
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I22.26
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A23.02
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.32
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.87
urinary bladder, adult.CNhs10481.879-12E47.53
uterus, adult pregnant day19.CNhs10497.590-15F510.13
uterus, adult.CNhs10509.92-27E57.69
vagina, adult.CNhs10502.89-27D511.58
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C66.12
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B46.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system1.14e-1347
intestine2.63e-1131
organ component layer2.13e-1024
mucosa4.82e-0915
intestinal mucosa7.49e-0813
wall of intestine7.49e-0813
gastrointestinal system mucosa7.49e-0813
splanchnic layer of lateral plate mesoderm3.04e-0733
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:127332009..127332021,-&oldid=4239616"