FFCP PHASE1:Hg19::chr12:70093092..70093110,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144453 | |EntrezGene=144453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17105 | |HGNC=17105 | ||
|TSSclassifier=strong | |||
|UniProt=F8VR37 | |UniProt=F8VR37 | ||
|association_with_transcript=4bp_to_ENST00000548658_5end | |association_with_transcript=4bp_to_ENST00000548658_5end | ||
|cluster_id=chr12:70093092..70093110,- | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_3_at_BEST3_5end | |description=CAGE_peak_3_at_BEST3_5end | ||
|id=chr12:70093092..70093110,- | |id=chr12:70093092..70093110,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.82e-13;2!CL:0000242;1.82e-13;2!CL:0000817;2.16e-07;1!CL:0000785;2.16e-07;1!CL:0000819;2.16e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.77e-13,2;CL:0000817,4.99e-09,3;CL:0000819,2.37e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.19e-18;3!UBERON:0006241;1.62e-08;3!UBERON:0003057;1.62e-08;3!UBERON:0004874;3.21e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.43e-09;10!DOID:0060073;2.16e-07;1!DOID:8675;2.16e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.43e-09,10;DOID:0060073,2.37e-07,1;DOID:8675,2.37e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.35e-48!57;UBERON:0005068!2.35e-48!57;UBERON:0006241!2.35e-48!57;UBERON:0007135!2.35e-48!57;UBERON:0002616!6.59e-41!59;UBERON:0007023!2.50e-40!115;UBERON:0001017!2.46e-37!82;UBERON:0005743!7.47e-37!86;UBERON:0002780!9.86e-37!41;UBERON:0001890!9.86e-37!41;UBERON:0006240!9.86e-37!41;UBERON:0003080!1.13e-35!42;UBERON:0000955!7.84e-35!69;UBERON:0006238!7.84e-35!69;UBERON:0003075!2.05e-33!86;UBERON:0007284!2.05e-33!86;UBERON:0000073!3.09e-32!94;UBERON:0001016!3.09e-32!94;UBERON:0002346!2.10e-31!90;UBERON:0001893!4.12e-28!34;UBERON:0002020!4.35e-28!34;UBERON:0003528!4.35e-28!34;UBERON:0000153!2.42e-27!129;UBERON:0007811!2.42e-27!129;UBERON:0002791!1.64e-26!33;UBERON:0003056!1.41e-25!61;UBERON:0001869!7.19e-25!32;UBERON:0000033!1.88e-23!123;UBERON:0002619!8.18e-22!22;UBERON:0004121!4.44e-21!169;UBERON:0000924!2.81e-20!173;UBERON:0006601!2.81e-20!173;UBERON:0000956!9.01e-19!25;UBERON:0000203!9.01e-19!25;UBERON:0001950!1.16e-18!20;UBERON:0003076!2.07e-13!15;UBERON:0003057!2.07e-13!15;UBERON:0000475!1.98e-12!365;UBERON:0000025!1.34e-11!194;UBERON:0000483!1.56e-11!309;UBERON:0000119!2.82e-11!312;UBERON:0002308!5.11e-11!9;UBERON:0000125!5.11e-11!9;UBERON:0004733!6.35e-11!12;UBERON:0002028!6.35e-11!12;UBERON:0007277!6.35e-11!12;UBERON:0001894!2.71e-10!7;UBERON:0006222!2.71e-10!7;UBERON:0004732!5.81e-10!13;UBERON:0002298!2.80e-09!8;UBERON:0004111!4.62e-09!241;UBERON:0002680!8.49e-09!9;UBERON:0001895!8.49e-09!9;UBERON:0010092!8.49e-09!9;UBERON:0001871!9.46e-09!7;UBERON:0000200!1.06e-08!6;UBERON:0000064!1.51e-08!219;UBERON:0000481!1.70e-08!347;UBERON:0002420!4.10e-08!9;UBERON:0007245!4.10e-08!9;UBERON:0010009!4.10e-08!9;UBERON:0010011!4.10e-08!9;UBERON:0000454!4.10e-08!9;UBERON:0000477!8.46e-08!286;UBERON:0009663!1.14e-07!7;UBERON:0001042!2.05e-07!10;UBERON:0009145!2.05e-07!10;UBERON:0000988!3.06e-07!3;UBERON:0002771!4.14e-07!3;UBERON:0001872!4.29e-07!5;UBERON:0006331!4.51e-07!3;UBERON:0000349!6.49e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;1.93e-13;2!UBERON:0001630;1.93e-13;2!UBERON:0000341;5.12e-13;2!UBERON:0002037;2.25e-09;6!UBERON:0001134;2.33e-09;16!UBERON:0002036;2.33e-09;16!UBERON:0001723;2.84e-09;3!UBERON:0001033;2.84e-09;3!UBERON:0002240;1.62e-08;3!UBERON:0005174;1.62e-08;3!UBERON:0001137;1.62e-08;3!UBERON:0001389;9.90e-08;1!UBERON:0000026;9.90e-08;1!UBERON:0008784;9.90e-08;1!UBERON:0006058;9.90e-08;1!UBERON:0003663;9.90e-08;1!UBERON:0004256;9.90e-08;1!UBERON:0004708;9.90e-08;1!UBERON:0002101;9.90e-08;1!UBERON:0004709;9.90e-08;1!UBERON:0002529;9.90e-08;1!UBERON:0010538;9.90e-08;1!UBERON:0003661;9.90e-08;1!UBERON:0010890;9.90e-08;1!UBERON:0002471;9.90e-08;1!UBERON:0001383;9.90e-08;1!UBERON:0010758;9.90e-08;1!UBERON:0010707;9.90e-08;1!UBERON:0000978;9.90e-08;1!UBERON:0002103;9.90e-08;1!UBERON:0001665;9.90e-08;1!UBERON:0003823;9.90e-08;1!UBERON:0000154;9.90e-08;1!UBERON:0010709;9.90e-08;1!UBERON:0002426;2.16e-07;1!UBERON:0003831;2.16e-07;1!UBERON:0003898;2.16e-07;1!UBERON:0004830;2.16e-07;1!UBERON:0003830;2.16e-07;1!UBERON:0005175;2.16e-07;1!UBERON:0001774;2.16e-07;1!UBERON:0001103;2.16e-07;1!UBERON:0000989;3.21e-07;1!UBERON:0008811;3.21e-07;1!UBERON:0001301;5.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,2.26e-13,2;UBERON:0001630,2.26e-13,2;UBERON:0000341,4.97e-13,2;UBERON:0003076,1.67e-09,15;UBERON:0003057,1.67e-09,15;UBERON:0002037,2.25e-09,6;UBERON:0006215,2.25e-09,6;UBERON:0001723,2.62e-09,3;UBERON:0001033,2.62e-09,3;UBERON:0010056,2.62e-09,3;UBERON:0002240,1.50e-08,3;UBERON:0005174,1.50e-08,3;UBERON:0001137,1.50e-08,3;UBERON:0005418,9.91e-08,1;UBERON:0001389,9.91e-08,1;UBERON:0000026,9.91e-08,1;UBERON:0008784,9.91e-08,1;UBERON:0006058,9.91e-08,1;UBERON:0003663,9.91e-08,1;UBERON:0004256,9.91e-08,1;UBERON:0004708,9.91e-08,1;UBERON:0002101,9.91e-08,1;UBERON:0004709,9.91e-08,1;UBERON:0002529,9.91e-08,1;UBERON:0010538,9.91e-08,1;UBERON:0003661,9.91e-08,1;UBERON:0010890,9.91e-08,1;UBERON:0002471,9.91e-08,1;UBERON:0001383,9.91e-08,1;UBERON:0004357,9.91e-08,1;UBERON:0004347,9.91e-08,1;UBERON:0005420,9.91e-08,1;UBERON:0005732,9.91e-08,1;UBERON:0010758,9.91e-08,1;UBERON:0010707,9.91e-08,1;UBERON:0000978,9.91e-08,1;UBERON:0002103,9.91e-08,1;UBERON:0001665,9.91e-08,1;UBERON:0003823,9.91e-08,1;UBERON:0000154,9.91e-08,1;UBERON:0010709,9.91e-08,1;UBERON:0005733,9.91e-08,1;UBERON:0005730,9.91e-08,1;UBERON:0002426,2.52e-07,1;UBERON:0003831,2.52e-07,1;UBERON:0003898,2.52e-07,1;UBERON:0004830,2.52e-07,1;UBERON:0003830,2.52e-07,1;UBERON:0005175,2.52e-07,1;UBERON:0001774,2.52e-07,1;UBERON:0001103,2.52e-07,1;UBERON:0010084,2.52e-07,1;UBERON:0000989,2.84e-07,1;UBERON:0008811,2.84e-07,1;UBERON:0006258,2.84e-07,1;UBERON:0005876,2.84e-07,1;UBERON:0004874,2.84e-07,1;UBERON:0001301,5.84e-07,1 | |||
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|short_description=p3@BEST3 | |short_description=p3@BEST3 | ||
}} | }} |
Latest revision as of 06:41, 20 September 2015
Short description: | p3@BEST3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BEST3_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 4bp_to_ENST00000548658_5end |
EntrezGene: | BEST3 |
HGNC: | 17105 |
UniProt: | F8VR37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.77e-13 | 2 |
precursor B cell | 4.99e-09 | 3 |
B-1 B cell | 2.37e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.43e-09 | 10 |
lymphatic system cancer | 2.37e-07 | 1 |
lymphosarcoma | 2.37e-07 | 1 |