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FFCP PHASE1:Mm9::chr1:107253057..107253093,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320311
|EntrezGene=320311
|HGNC=
|HGNC=
|MCL_coexpression_id=401
|TSSclassifier=NA
|UniProt=Q8BG47
|UniProt=Q8BG47
|association_with_transcript=193bp_to_ENSMUST00000058688,ENSMUST00000172299,NM_001160368,NM_178779,uc011wpy.1,uc011wpz.1_5end
|association_with_transcript=193bp_to_ENSMUST00000058688,ENSMUST00000172299,NM_001160368,NM_178779,uc011wpy.1,uc011wpz.1_5end
|cluster_id=chr1:107253057..107253093,-
|description=CAGE_peak_2_at_Rnf152_5end
|description=CAGE_peak_2_at_Rnf152_5end
|id=chr1:107253057..107253093,-
|id=chr1:107253057..107253093,-
|ontology_enrichment_celltype=CL:0000117!5.24e-16!23;CL:0000337!5.24e-16!23;CL:0000540!2.01e-15!33;CL:0000047!2.01e-15!33;CL:0000031!2.01e-15!33;CL:0000404!2.01e-15!33;CL:0000393!3.75e-11!39;CL:0000211!3.75e-11!39;CL:0000221!7.24e-10!44;CL:0000133!7.24e-10!44;CL:0002319!1.33e-09!43;CL:0000055!2.31e-07!50
|ontology_enrichment_celltype=CL:0000117!5.24e-16!23;CL:0000337!5.24e-16!23;CL:0000540!2.01e-15!33;CL:0000047!2.01e-15!33;CL:0000031!2.01e-15!33;CL:0000404!2.01e-15!33;CL:0000393!3.75e-11!39;CL:0000211!3.75e-11!39;CL:0000221!7.24e-10!44;CL:0000133!7.24e-10!44;CL:0002319!1.33e-09!43;CL:0000055!2.31e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.51e-29,23;CL:0000337,1.51e-29,23;CL:0000540,4.32e-20,33;CL:0000047,4.32e-20,33;CL:0000031,4.32e-20,33;CL:0000404,4.32e-20,33;CL:0000393,6.64e-16,39;CL:0000211,6.64e-16,39;CL:0002319,8.88e-14,43;CL:0000221,2.61e-13,44;CL:0000133,2.61e-13,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!9.84e-20!73;UBERON:0005743!9.84e-20!73;UBERON:0000073!2.22e-18!75;UBERON:0001016!2.22e-18!75;UBERON:0002020!2.45e-17!34;UBERON:0001049!1.91e-16!52;UBERON:0005068!1.91e-16!52;UBERON:0006241!1.91e-16!52;UBERON:0007135!1.91e-16!52;UBERON:0000955!8.72e-15!50;UBERON:0006238!8.72e-15!50;UBERON:0002616!2.10e-14!49;UBERON:0000033!7.25e-14!63;UBERON:0002791!1.11e-13!29;UBERON:0003528!1.11e-13!29;UBERON:0001893!1.11e-13!29;UBERON:0004121!2.62e-13!102;UBERON:0000924!2.62e-13!102;UBERON:0006601!2.62e-13!102;UBERON:0002346!2.75e-13!71;UBERON:0003075!2.75e-13!71;UBERON:0007284!2.75e-13!71;UBERON:0003080!2.13e-11!40;UBERON:0003056!2.73e-11!49;UBERON:0002780!8.10e-11!39;UBERON:0001890!8.10e-11!39;UBERON:0006240!8.10e-11!39;UBERON:0000956!6.86e-09!21;UBERON:0001869!6.86e-09!21;UBERON:0000203!6.86e-09!21;UBERON:0002619!4.85e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.18e-30,54;UBERON:0001049,1.43e-27,52;UBERON:0005068,1.43e-27,52;UBERON:0006241,1.43e-27,52;UBERON:0007135,1.43e-27,52;UBERON:0001017,1.65e-27,73;UBERON:0001016,1.90e-26,75;UBERON:0002020,1.75e-25,34;UBERON:0002346,6.43e-22,64;UBERON:0003075,6.43e-22,64;UBERON:0007284,6.43e-22,64;UBERON:0002616,7.41e-20,46;UBERON:0004121,1.58e-19,95;UBERON:0000924,1.58e-19,95;UBERON:0006601,1.58e-19,95;UBERON:0000955,2.99e-19,47;UBERON:0006238,2.99e-19,47;UBERON:0003528,1.78e-18,29;UBERON:0002791,1.78e-18,29;UBERON:0001893,1.78e-18,29;UBERON:0010371,6.45e-18,73;UBERON:0003080,2.74e-16,40;UBERON:0002780,3.35e-15,39;UBERON:0001890,3.35e-15,39;UBERON:0006240,3.35e-15,39;UBERON:0003056,3.04e-13,49;UBERON:0003076,8.46e-13,12;UBERON:0003057,8.46e-13,12;UBERON:0010314,4.14e-12,92;UBERON:0000956,6.85e-11,21;UBERON:0001869,6.85e-11,21;UBERON:0000203,6.85e-11,21;UBERON:0002240,3.54e-10,6;UBERON:0005174,3.54e-10,6;UBERON:0001137,3.54e-10,6;UBERON:0002420,2.28e-09,8;UBERON:0007245,2.28e-09,8;UBERON:0010009,2.28e-09,8;UBERON:0010011,2.28e-09,8;UBERON:0000454,2.28e-09,8;UBERON:0001948,5.28e-09,5;UBERON:0002315,5.28e-09,5;UBERON:0000025,1.47e-08,114;UBERON:0002619,1.80e-07,17;UBERON:0004111,2.24e-07,122;UBERON:0002021,2.44e-07,10;UBERON:0000411,2.44e-07,10;UBERON:0001950,2.44e-07,10
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0.430761996159075,0,0,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.972149495371417,0,0,0,0,0,0,0.286533439938757,0,9.1042407386819,10.0508286061686,10.775133859605,0,0,0,0,0,0.299600110518405,0,1.24427534770173,1.4850653216486,1.47227472945967,4.57041575046086,7.50953039235486,1.46988959057945,0.958454710182364,1.83843757322004,6.60695285996332,4.72443150915195,4.76180253094355,9.36392642884376,8.05091263701205,9.89735404057844,4.18774498502071,1.68828783009504,3.81995619442025,16.2045722010517,13.2405663143166,14.911955666024,0,0,0.289864488701678,0.860423876981386,0.679971333707751,0.539703191637817,0.649776417447669,1.34408066129201,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0.86759614151947,0,0,0,0,0,17.5668478206928,21.154117388159,1.02182822083437,0.11981512450592,0,0,3.74476598512057,0.915001205637253,2.89005009859588,1.39059456153821,2.04572365864264,3.94797284663164,2.75810147215188,0.305518091550949,0,0,0.631325567659422,0,0,0.180062129805349,0.60281927134286,0.680364991513279,0.2562274405697,0.655912071918102,1.81092359517311,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0.308534225774757,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0,0.630869845692382,3.08713837137853,1.32167513193519,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0.570676878337677,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.648414149624083,1.39398891278057,0,0,0,0.203651327845314,0.387904974335251,0.280543279561274,0.505892296994058,0.442830443938806,0.470996183524124,0.123397163921801,0.889357881261447,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0.324270453550071,0.274561413188081,0,0,0,0.252578877947112,0.358794827043824,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0.469380496577004,0,0,0,0.157635144106191,1.55025282754142,0.637819074629948,0,0.172684981865896,0,0,0,0,0,3.69266356971921,3.6335622843583,0,0,0.94652465824877,0,0.646270193198397,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,1.16902343164525,0.790575555893047,0.963963949265421,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.900305470156551,0.129358683782755,0.428674070063185,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0,0.120625849856312,0.119372344003136,0.492422699235184,0.291480836629851,2.59595422814714,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.158167996790568,0,0.216010681643603,0,0.436725127492355,0.674321731924103,0.247960367176008,0.26175594198403,1.29614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.58678619322877,0.5208175393758,0.629156066554265,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0,0,2.25900737046827,2.30162618253588,1.14579102687879,1.20297227640581,0.685082519770642,1.5107877947794,1.35004500046361,1.35096360967266,0.453142408984205,3.10656187051092,0.415149390336707,0.798049746802062,0.682934423016537,0,1.04806581313991,1.83843508450014,1.11123363900808,1.23621034343337,0.962757628775446,0,0.760437899670719,1.32038438970253,0.936415074698824,0.832326981263301,0.861532034334199,1.42888107384922,0.927074607558844,0.964546102318525,0.412085900803307,0.735994600671987,0.685738504770831,0.70990322463735,1.43061713968393,0.581385666529314,1.50575008664529,1.4384483341585,0.365855945745545,0.526139422875686,2.03706170768793,1.12228454331548,0.830445126869219,1.28055827088233,0,0.77468420592983,1.15743966588685,2.74791635731741,1.40358965067245,0.429742108096597,1.14772999241306,0.220591419119515,0.695603506861264
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0.430761996159075,0,0,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.664938581433969,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0.972149495371417,0,0,0,0,0,0,0.286533439938757,0,9.1042407386819,10.0508286061686,10.775133859605,0,0,0,0,0,0.299600110518405,0,1.24427534770173,1.4850653216486,1.47227472945967,4.57041575046086,7.50953039235486,1.46988959057945,0.958454710182364,1.83843757322004,6.60695285996332,4.72443150915195,4.76180253094355,9.36392642884376,8.05091263701205,9.89735404057844,4.18774498502071,1.68828783009504,3.81995619442025,16.2045722010517,13.2405663143166,14.911955666024,0,0,0.289864488701678,0.860423876981386,0.679971333707751,0.539703191637817,0.649776417447669,1.34408066129201,0.561777680527007,0,0,0,0.704217098883403,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0.86759614151947,0,0,0,0,0,17.5668478206928,21.154117388159,1.02182822083437,0.11981512450592,0,0,3.74476598512057,0.915001205637253,2.89005009859588,1.39059456153821,2.04572365864264,3.94797284663164,2.75810147215188,0.305518091550949,0,0,0.631325567659422,0,0,0.180062129805349,0.60281927134286,0.680364991513279,0.2562274405697,0.655912071918102,1.81092359517311,0.215567992932842,0.189106080167819,0.527853372491847,0.43839146485515,0.278047249225598,0.348252166522167,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0.308534225774757,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0,0.630869845692382,3.08713837137853,1.32167513193519,0,0.213288250535234,0.232236671860439,0.38660238396628,0.201683524623343,0.22237804384487,0.570676878337677,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0.648414149624083,1.39398891278057,0,0,0,0.203651327845314,0.387904974335251,0.280543279561274,0.505892296994058,0.442830443938806,0.470996183524124,0.123397163921801,0.889357881261447,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0.324270453550071,0.274561413188081,0,0,0,0.252578877947112,0.358794827043824,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0.469380496577004,0,0,0,0.157635144106191,1.55025282754142,0.637819074629948,0,0.172684981865896,0,0,0,0,0,3.69266356971921,3.6335622843583,0,0,0.94652465824877,0,0.646270193198397,0.238968797952552,0.222798674082394,0.566153061577665,0.404810701674894,1.16902343164525,0.790575555893047,0.963963949265421,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.900305470156551,0.129358683782755,0.428674070063185,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0,0.120625849856312,0.119372344003136,0.492422699235184,0.291480836629851,2.59595422814714,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.158167996790568,0,0.216010681643603,0,0.436725127492355,0.674321731924103,0.247960367176008,0.26175594198403,1.29614973291793,0,0,0.149516546043979,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.58678619322877,0.5208175393758,0.629156066554265,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0,0,2.25900737046827,2.30162618253588,1.14579102687879,1.20297227640581,0.685082519770642,1.5107877947794,1.35004500046361,1.35096360967266,0.453142408984205,3.10656187051092,0.415149390336707,0.798049746802062,0.682934423016537,0,1.04806581313991,1.83843508450014,1.11123363900808,1.23621034343337,0.962757628775446,0,0.760437899670719,1.32038438970253,0.936415074698824,0.832326981263301,0.861532034334199,1.42888107384922,0.927074607558844,0.964546102318525,0.412085900803307,0.735994600671987,0.685738504770831,0.70990322463735,1.43061713968393,0.581385666529314,1.50575008664529,1.4384483341585,0.365855945745545,0.526139422875686,2.03706170768793,1.12228454331548,0.830445126869219,1.28055827088233,0,0.77468420592983,1.15743966588685,2.74791635731741,1.40358965067245,0.429742108096597,1.14772999241306,0.220591419119515,0.695603506861264
|short_description=p2@Rnf152
|short_description=p2@Rnf152
}}
}}

Latest revision as of 05:30, 26 September 2015

Short description:p2@Rnf152
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rnf152_5end
Coexpression cluster:MCL_coexpression_mm9:401
Association with transcript: 193bp_to_ENSMUST00000058688, ENSMUST00000172299, NM_001160368, NM_178779, uc011wpy.1, uc011wpz.1_5end
EntrezGene:Rnf152
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Rnf152

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.10
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B217.57
cerebellum, neonate N30.CNhs11135.1395-42I221.15
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.74
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.51e-2923
neuroblast (sensu Vertebrata)1.51e-2923
neuron4.32e-2033
neuronal stem cell4.32e-2033
neuroblast4.32e-2033
electrically signaling cell4.32e-2033
electrically responsive cell6.64e-1639
electrically active cell6.64e-1639
neural cell8.88e-1443
ectodermal cell2.61e-1344
neurectodermal cell2.61e-1344

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.18e-3054
neural tube1.43e-2752
neural rod1.43e-2752
future spinal cord1.43e-2752
neural keel1.43e-2752
central nervous system1.65e-2773
nervous system1.90e-2675
gray matter1.75e-2534
neurectoderm6.43e-2264
neural plate6.43e-2264
presumptive neural plate6.43e-2264
regional part of brain7.41e-2046
ectoderm-derived structure1.58e-1995
ectoderm1.58e-1995
presumptive ectoderm1.58e-1995
brain2.99e-1947
future brain2.99e-1947
brain grey matter1.78e-1829
regional part of telencephalon1.78e-1829
telencephalon1.78e-1829
ecto-epithelium6.45e-1873
anterior neural tube2.74e-1640
regional part of forebrain3.35e-1539
forebrain3.35e-1539
future forebrain3.35e-1539
pre-chordal neural plate3.04e-1349
posterior neural tube8.46e-1312
chordal neural plate8.46e-1312
structure with developmental contribution from neural crest4.14e-1292
cerebral cortex6.85e-1121
cerebral hemisphere6.85e-1121
pallium6.85e-1121
spinal cord3.54e-106
dorsal region element3.54e-106
dorsum3.54e-106
basal ganglion2.28e-098
nuclear complex of neuraxis2.28e-098
aggregate regional part of brain2.28e-098
collection of basal ganglia2.28e-098
cerebral subcortex2.28e-098
regional part of spinal cord5.28e-095
gray matter of spinal cord5.28e-095
tube1.47e-08114
regional part of cerebral cortex1.80e-0717
anatomical conduit2.24e-07122
occipital lobe2.44e-0710
visual cortex2.44e-0710
neocortex2.44e-0710
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