FFCP PHASE1:Mm9::chr10:34018870..34018874,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:34018870..34018874,+ | |||
|description=CAGE_peak_at_chr10:34018870..34018874,+ | |description=CAGE_peak_at_chr10:34018870..34018874,+ | ||
|id=chr10:34018870..34018874,+ | |id=chr10:34018870..34018874,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.27e-13!23;CL:0000337!1.27e-13!23;CL:0000540!1.91e-09!33;CL:0000047!1.91e-09!33;CL:0000031!1.91e-09!33;CL:0000404!1.91e-09!33;CL:0000221!3.92e-08!44;CL:0000133!3.92e-08!44;CL:0002319!9.91e-08!43;CL:0000393!2.38e-07!39;CL:0000211!2.38e-07!39 | |ontology_enrichment_celltype=CL:0000117!1.27e-13!23;CL:0000337!1.27e-13!23;CL:0000540!1.91e-09!33;CL:0000047!1.91e-09!33;CL:0000031!1.91e-09!33;CL:0000404!1.91e-09!33;CL:0000221!3.92e-08!44;CL:0000133!3.92e-08!44;CL:0002319!9.91e-08!43;CL:0000393!2.38e-07!39;CL:0000211!2.38e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.39e-26,23;CL:0000337,8.39e-26,23;CL:0000540,1.08e-16,33;CL:0000047,1.08e-16,33;CL:0000031,1.08e-16,33;CL:0000404,1.08e-16,33;CL:0000393,1.77e-13,39;CL:0000211,1.77e-13,39;CL:0002319,7.68e-12,43;CL:0000221,1.77e-11,44;CL:0000133,1.77e-11,44;CL:0002614,1.54e-08,3;CL:0002612,8.14e-08,3;CL:0000120,8.24e-07,3;CL:0002321,9.75e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.22e-26!52;UBERON:0005068!1.22e-26!52;UBERON:0006241!1.22e-26!52;UBERON:0007135!1.22e-26!52;UBERON:0002346!9.48e-25!71;UBERON:0003075!9.48e-25!71;UBERON:0007284!9.48e-25!71;UBERON:0001017!9.34e-23!73;UBERON:0005743!9.34e-23!73;UBERON:0002616!1.82e-22!49;UBERON:0000033!2.23e-22!63;UBERON:0000955!1.26e-21!50;UBERON:0006238!1.26e-21!50;UBERON:0000073!1.68e-21!75;UBERON:0001016!1.68e-21!75;UBERON:0002020!4.31e-21!34;UBERON:0003056!9.70e-20!49;UBERON:0003080!6.62e-19!40;UBERON:0004121!8.19e-19!102;UBERON:0000924!8.19e-19!102;UBERON:0006601!8.19e-19!102;UBERON:0002780!4.45e-18!39;UBERON:0001890!4.45e-18!39;UBERON:0006240!4.45e-18!39;UBERON:0002791!5.80e-17!29;UBERON:0003528!5.80e-17!29;UBERON:0001893!5.80e-17!29;UBERON:0007811!4.41e-16!86;UBERON:0000153!4.89e-14!94;UBERON:0000956!4.47e-11!21;UBERON:0001869!4.47e-11!21;UBERON:0000203!4.47e-11!21;UBERON:0002619!4.06e-09!17;UBERON:0003076!2.78e-08!12;UBERON:0003057!2.78e-08!12;UBERON:0002021!9.12e-08!10;UBERON:0000411!9.12e-08!10;UBERON:0001950!9.12e-08!10;UBERON:0002420!2.70e-07!8;UBERON:0007245!2.70e-07!8;UBERON:0010009!2.70e-07!8;UBERON:0010011!2.70e-07!8;UBERON:0000454!2.70e-07!8;UBERON:0000025!3.50e-07!114;UBERON:0004111!4.75e-07!122 | |ontology_enrichment_uberon=UBERON:0001049!1.22e-26!52;UBERON:0005068!1.22e-26!52;UBERON:0006241!1.22e-26!52;UBERON:0007135!1.22e-26!52;UBERON:0002346!9.48e-25!71;UBERON:0003075!9.48e-25!71;UBERON:0007284!9.48e-25!71;UBERON:0001017!9.34e-23!73;UBERON:0005743!9.34e-23!73;UBERON:0002616!1.82e-22!49;UBERON:0000033!2.23e-22!63;UBERON:0000955!1.26e-21!50;UBERON:0006238!1.26e-21!50;UBERON:0000073!1.68e-21!75;UBERON:0001016!1.68e-21!75;UBERON:0002020!4.31e-21!34;UBERON:0003056!9.70e-20!49;UBERON:0003080!6.62e-19!40;UBERON:0004121!8.19e-19!102;UBERON:0000924!8.19e-19!102;UBERON:0006601!8.19e-19!102;UBERON:0002780!4.45e-18!39;UBERON:0001890!4.45e-18!39;UBERON:0006240!4.45e-18!39;UBERON:0002791!5.80e-17!29;UBERON:0003528!5.80e-17!29;UBERON:0001893!5.80e-17!29;UBERON:0007811!4.41e-16!86;UBERON:0000153!4.89e-14!94;UBERON:0000956!4.47e-11!21;UBERON:0001869!4.47e-11!21;UBERON:0000203!4.47e-11!21;UBERON:0002619!4.06e-09!17;UBERON:0003076!2.78e-08!12;UBERON:0003057!2.78e-08!12;UBERON:0002021!9.12e-08!10;UBERON:0000411!9.12e-08!10;UBERON:0001950!9.12e-08!10;UBERON:0002420!2.70e-07!8;UBERON:0007245!2.70e-07!8;UBERON:0010009!2.70e-07!8;UBERON:0010011!2.70e-07!8;UBERON:0000454!2.70e-07!8;UBERON:0000025!3.50e-07!114;UBERON:0004111!4.75e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.63e-37,54;UBERON:0001049,9.68e-36,52;UBERON:0005068,9.68e-36,52;UBERON:0006241,9.68e-36,52;UBERON:0007135,9.68e-36,52;UBERON:0001017,2.11e-33,73;UBERON:0001016,2.64e-32,75;UBERON:0002346,1.22e-29,64;UBERON:0003075,1.22e-29,64;UBERON:0007284,1.22e-29,64;UBERON:0002020,1.44e-27,34;UBERON:0004121,2.05e-25,95;UBERON:0000924,2.05e-25,95;UBERON:0006601,2.05e-25,95;UBERON:0002616,4.25e-25,46;UBERON:0010371,4.42e-25,73;UBERON:0000955,1.96e-24,47;UBERON:0006238,1.96e-24,47;UBERON:0003080,3.30e-20,40;UBERON:0002780,1.44e-18,39;UBERON:0001890,1.44e-18,39;UBERON:0006240,1.44e-18,39;UBERON:0003528,1.50e-18,29;UBERON:0002791,1.50e-18,29;UBERON:0001893,1.50e-18,29;UBERON:0010314,2.19e-18,92;UBERON:0003076,2.15e-17,12;UBERON:0003057,2.15e-17,12;UBERON:0003056,3.69e-17,49;UBERON:0002240,8.95e-14,6;UBERON:0005174,8.95e-14,6;UBERON:0001137,8.95e-14,6;UBERON:0002420,9.87e-14,8;UBERON:0007245,9.87e-14,8;UBERON:0010009,9.87e-14,8;UBERON:0010011,9.87e-14,8;UBERON:0000454,9.87e-14,8;UBERON:0000025,2.16e-12,114;UBERON:0001948,5.18e-12,5;UBERON:0002315,5.18e-12,5;UBERON:0004111,4.13e-11,122;UBERON:0002950,1.05e-10,4;UBERON:0001891,1.05e-10,4;UBERON:0009616,1.05e-10,4;UBERON:0010286,1.05e-10,4;UBERON:0002021,6.70e-10,10;UBERON:0000411,6.70e-10,10;UBERON:0001950,6.70e-10,10;UBERON:0002038,1.54e-08,3;UBERON:0009663,1.54e-08,3;UBERON:0009661,1.54e-08,3;UBERON:0000125,1.54e-08,3;UBERON:0002308,1.54e-08,3;UBERON:0011216,1.65e-08,194;UBERON:0000956,1.82e-08,21;UBERON:0001869,1.82e-08,21;UBERON:0000203,1.82e-08,21;UBERON:0002257,8.14e-08,3;UBERON:0000369,3.57e-07,5;UBERON:0002435,3.57e-07,5;UBERON:0000204,3.57e-07,5;UBERON:0010082,3.57e-07,5;UBERON:0000483,4.49e-07,174;UBERON:0002619,5.10e-07,17;UBERON:0000119,6.56e-07,176 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.425216450755349,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,0,0,0.872100625521786,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,1.4850653216486,0.841299845405528,2.57085885963423,3.3130281142742,0.489963196859816,1.62937300731002,0,0,3.70293280447044,2.4577045320999,1.18697658957174,5.58074625974699,0.52091337055676,4.74611098302348,5.06486349028512,4.5839474333043,2.35702868378934,2.56269025438385,3.35519002485541,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0.170430322578058,0.519572009205738,0,0.563373679106722,0,0,7.11066703153331,0,0,0,0.45673551887624,0.258937883647172,0,0,0,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,3.44518470631092,1.83000241127451,1.00523481690292,1.21677024134594,2.04572365864264,3.74018480207208,1.94689515681309,0,0,0,0.631325567659422,0.520481771850815,0.229902104433473,0,0.30140963567143,0,0.2562274405697,0.187403449119458,1.03481348295606,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0.540186184383045,0,0.590292695242212,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,0.420579897128254,0.514523061896422,0,0,0.426576501070468,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0,0.126473074248515,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0.159454768657487,0,0.518054945597687,0.144649058581512,0,0,0.491764273019036,0,3.53211297973142,3.16471553798949,0.327869890753351,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0.214337035031592,0,0.713475270408282,0.987294123612726,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.436725127492355,0.269728692769641,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0,0,0.234714477291508,0.13020438484395,0,0.483168241652012,0,0.632022241256357,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0,0.192423683280659,0,0,0,0.0897138566094757,0,0,0.375364950902364,0,0,0.501572104035363,1.12950368523413,0.920650473014354,1.71868654031819,2.23409137046794,1.37016503954128,4.5323633843382,0.675022500231806,0.45032120322422,2.26571204492102,1.03552062350364,0.207574695168353,0.399024873401031,0.170733605754134,0,0.628839487883947,0.183843508450014,0.44449345560323,0.412070114477788,0,0,0.50695859978048,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0.115884325944855,0.38581844092741,1.23625770240992,0,1.02860775715625,0.532427418478012,0.476872379894642,0.290692833264657,0.376437521661322,0,0.73171189149109,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.425216450755349,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,0,0,0.872100625521786,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,1.21389876515759,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,1.4850653216486,0.841299845405528,2.57085885963423,3.3130281142742,0.489963196859816,1.62937300731002,0,0,3.70293280447044,2.4577045320999,1.18697658957174,5.58074625974699,0.52091337055676,4.74611098302348,5.06486349028512,4.5839474333043,2.35702868378934,2.56269025438385,3.35519002485541,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0.170430322578058,0.519572009205738,0,0.563373679106722,0,0,7.11066703153331,0,0,0,0.45673551887624,0.258937883647172,0,0,0,0.230615497256059,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,3.44518470631092,1.83000241127451,1.00523481690292,1.21677024134594,2.04572365864264,3.74018480207208,1.94689515681309,0,0,0,0.631325567659422,0.520481771850815,0.229902104433473,0,0.30140963567143,0,0.2562274405697,0.187403449119458,1.03481348295606,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0.540186184383045,0,0.590292695242212,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,0.420579897128254,0.514523061896422,0,0,0.426576501070468,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0,0.126473074248515,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0.159454768657487,0,0.518054945597687,0.144649058581512,0,0,0.491764273019036,0,3.53211297973142,3.16471553798949,0.327869890753351,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0.214337035031592,0,0.713475270408282,0.987294123612726,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.436725127492355,0.269728692769641,0.0826534557253359,0,0,0,0.56369293868419,0,0,0,0,0,0.234714477291508,0.13020438484395,0,0.483168241652012,0,0.632022241256357,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.302478555410522,0,0.192423683280659,0,0,0,0.0897138566094757,0,0,0.375364950902364,0,0,0.501572104035363,1.12950368523413,0.920650473014354,1.71868654031819,2.23409137046794,1.37016503954128,4.5323633843382,0.675022500231806,0.45032120322422,2.26571204492102,1.03552062350364,0.207574695168353,0.399024873401031,0.170733605754134,0,0.628839487883947,0.183843508450014,0.44449345560323,0.412070114477788,0,0,0.50695859978048,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0.115884325944855,0.38581844092741,1.23625770240992,0,1.02860775715625,0.532427418478012,0.476872379894642,0.290692833264657,0.376437521661322,0,0.73171189149109,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0.818462086339379,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr10:34018870..34018874,+ | |short_description=p@chr10:34018870..34018874,+ | ||
}} | }} |
Latest revision as of 08:06, 4 August 2015
Short description: | p@chr10:34018870..34018874, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:34018870..34018874, + |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.39e-26 | 23 |
neuroblast (sensu Vertebrata) | 8.39e-26 | 23 |
neuron | 1.08e-16 | 33 |
neuronal stem cell | 1.08e-16 | 33 |
neuroblast | 1.08e-16 | 33 |
electrically signaling cell | 1.08e-16 | 33 |
electrically responsive cell | 1.77e-13 | 39 |
electrically active cell | 1.77e-13 | 39 |
neural cell | 7.68e-12 | 43 |
ectodermal cell | 1.77e-11 | 44 |
neurectodermal cell | 1.77e-11 | 44 |
neuron of the substantia nigra | 1.54e-08 | 3 |
neuron of the ventral spinal cord | 8.14e-08 | 3 |
granule cell | 8.24e-07 | 3 |
embryonic cell | 9.75e-07 | 70 |