FFCP PHASE1:Mm9::chr3:10366967..10366987,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66371 | |EntrezGene=66371 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D7F7 | |UniProt=Q9D7F7 | ||
|association_with_transcript=0bp_to_NM_025519,uc008opu.1,uc012cni.1_5end | |association_with_transcript=0bp_to_NM_025519,uc008opu.1,uc012cni.1_5end | ||
|cluster_id=chr3:10366967..10366987,+ | |||
|description=CAGE_peak_2_at_Chmp4c_5end | |description=CAGE_peak_2_at_Chmp4c_5end | ||
|id=chr3:10366967..10366987,+ | |id=chr3:10366967..10366987,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.74e-07!9;CL:0002251!2.74e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.80e-08,9;CL:0002251,1.80e-08,9;CL:0000066,2.38e-08,25;CL:0002076,5.64e-07,15;CL:0000075,8.98e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.59e-22!43;UBERON:0005409!9.36e-22!59;UBERON:0004119!1.92e-18!130;UBERON:0000925!1.92e-18!130;UBERON:0006595!1.92e-18!130;UBERON:0001007!8.83e-18!128;UBERON:0001555!8.83e-18!128;UBERON:0007026!8.83e-18!128;UBERON:0004921!1.21e-16!126;UBERON:0004185!1.21e-16!126;UBERON:0000344!3.74e-11!15;UBERON:0001242!5.98e-10!13;UBERON:0000060!5.98e-10!13;UBERON:0001262!5.98e-10!13;UBERON:0004786!5.98e-10!13;UBERON:0002108!6.54e-08!16;UBERON:0004923!1.19e-07!24;UBERON:0000485!2.25e-07!11;UBERON:0003350!2.74e-07!9;UBERON:0004808!2.74e-07!9;UBERON:0001277!2.74e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.03e-21,31;UBERON:0005409,2.22e-19,47;UBERON:0000344,3.97e-13,15;UBERON:0004119,8.64e-12,118;UBERON:0000925,8.64e-12,118;UBERON:0006595,8.64e-12,118;UBERON:0001242,1.12e-11,13;UBERON:0001262,1.12e-11,13;UBERON:0004786,1.12e-11,13;UBERON:0001007,3.43e-11,116;UBERON:0001555,3.43e-11,116;UBERON:0007026,3.43e-11,116;UBERON:0004921,3.45e-10,114;UBERON:0000485,1.41e-08,11;UBERON:0004923,1.63e-08,24;UBERON:0003350,1.80e-08,9;UBERON:0004808,1.80e-08,9;UBERON:0001277,1.80e-08,9 | |||
|phase1_expression=1.76163731815273,97.0151633237424,93.2748440748549,137.923680355914,150.268718983904,48.8528681263599,40.4149868230259,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,42.2379996174594,37.1643035328815,76.3728512272977,72.7987773508836,60.5474163847348,69.9286183599456,57.7148997150241,39.0245698753336,0,0,0,35.817600849158,25.9326046759248,33.2796050707662,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,20.0006497204158,0.860423876981386,6.11974200336975,0,0.649776417447669,0,3.7919993435573,0,0,0,5.35204995151386,0,0,0,13.6389355837065,16.2150313904063,15.1657333504435,11.3042040921869,0,0,0,0.608930956624282,0,0.301445281105245,0.587943535678524,0,21.0115722574218,1.15679485535929,0,0.323533699894818,0,0.484875253135222,42.8701050801681,0,0,54.1568957042214,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.497627882440372,4.29628689337247,3.57751155007006,0.130120442962704,0.229902104433473,0.180062129805349,1.80845781402858,0.408218994907967,0.640568601424249,0.562210347358373,2.06962696591213,0.646703978798527,0.378212160335639,0.527853372491847,0.219195732427575,1.39023624612799,7.66154766348766,18.7261744131229,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.983821158737019,0.617068451549513,1.16266972375204,0.536546802799238,1.28441876603886,0.658239399653922,0.656669856316381,0.56748166682099,2.04679982395465,1.3173006917463,0.939444931322602,0.210289948564127,0,89.8739089715931,36.4941781995691,1.06644125267617,1.85789337488351,5.02583099156164,10.0841762311671,10.0070119730192,9.13083005340284,43.1821446005506,16.6345944271251,18.0961350336194,20.4925166202385,12.6726656627428,43.1433316154026,45.8212665734352,55.9586977844772,0,0.342745537829186,0,1.01825663922657,0.775809948670503,0.771494018793504,0.885311519739602,2.65698266363284,1.41298855057237,3.45512058981041,0.889357881261447,0.500535317148282,0.982794975566015,0.899448449539415,2.02860121388503,4.58236603529592,4.07401362850272,5.17853047411459,1.62135226775035,1.92192989231657,2.87536413054709,1.48856379067401,3.12037673114561,1.26289438973556,0.358794827043824,1.92977408545347,2.21703828199926,0,0.325929952884052,0.169745085775188,0.234690248288502,0.670025029767263,2.14239276797412,1.36593553500459,1.26108115284953,0.221464689648775,0.318909537314974,2.78567635016755,1.89953480052485,2.16973587872267,0,0,0.983528546038072,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.325773918707152,0.824850614862677,1.32745138339963,8.49732226542435,8.76738315197778,19.4263232148575,10.6308681437078,11.0676653259814,10.3371317267288,6.90714086007261,9.26893183800275,11.0612865277536,9.48767477174989,7.21948802737308,0.340439605753788,0.900305470156551,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,3.28540391289194,4.02480934641258,10.8058915046931,21.9298716412168,19.2142667768128,13.2688434841943,19.218947384505,28.2322347561505,34.9777003955821,0.18542530201051,0,0.412773735926445,0.925972636848558,0,0.136694227721025,0,0,0,0,20.0480829783174,0.158167996790568,2.03319467126849,3.88819226958485,7.94535524854981,12.8833912610245,12.6772485601731,10.9929096114697,22.7727669526106,44.3283208657932,21.7468759580424,0,0.299033092087958,0.66183396182839,0.388902376688095,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0.948033361884535,0.608175645870493,0.718976700153791,0.25984164595559,0,0,0,0.590758108698309,0.201932899896295,0.0762068066549998,0.201652370273681,0.779663045918019,0.481059208201647,0.467507608726276,37.1837829128947,3.55177525398503,1.97370484540847,4.19711540910196,3.86379188064381,2.62755465631655,1.28206136987086,25.7242054894879,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.972426868273176,1.04806581313991,4.41224420280034,3.77819437262746,3.29656091582231,4.1719497246936,1.76888048234658,3.04175159868288,3.2066478035633,1.31098110457835,2.24088033417042,2.29741875822453,2.85776214769844,1.97003354106254,2.12200142510076,2.88460130562315,2.50238164228475,2.40008476669791,2.48466128623072,1.90748951957857,3.48831399917588,2.35273451038327,2.28459441307527,2.37806364734604,3.41990624869196,2.30866993537965,1.68342681497322,2.84724043498018,3.25064791839359,2.04615521584845,3.09873682371932,8.29498427218908,3.74715866906919,4.21076895201735,6.23126056740065,1.91288332068843,2.8676884485537,0.695603506861264 | |phase1_expression=1.76163731815273,97.0151633237424,93.2748440748549,137.923680355914,150.268718983904,48.8528681263599,40.4149868230259,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,42.2379996174594,37.1643035328815,76.3728512272977,72.7987773508836,60.5474163847348,69.9286183599456,57.7148997150241,39.0245698753336,0,0,0,35.817600849158,25.9326046759248,33.2796050707662,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,20.0006497204158,0.860423876981386,6.11974200336975,0,0.649776417447669,0,3.7919993435573,0,0,0,5.35204995151386,0,0,0,13.6389355837065,16.2150313904063,15.1657333504435,11.3042040921869,0,0,0,0.608930956624282,0,0.301445281105245,0.587943535678524,0,21.0115722574218,1.15679485535929,0,0.323533699894818,0,0.484875253135222,42.8701050801681,0,0,54.1568957042214,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.497627882440372,4.29628689337247,3.57751155007006,0.130120442962704,0.229902104433473,0.180062129805349,1.80845781402858,0.408218994907967,0.640568601424249,0.562210347358373,2.06962696591213,0.646703978798527,0.378212160335639,0.527853372491847,0.219195732427575,1.39023624612799,7.66154766348766,18.7261744131229,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0.983821158737019,0.617068451549513,1.16266972375204,0.536546802799238,1.28441876603886,0.658239399653922,0.656669856316381,0.56748166682099,2.04679982395465,1.3173006917463,0.939444931322602,0.210289948564127,0,89.8739089715931,36.4941781995691,1.06644125267617,1.85789337488351,5.02583099156164,10.0841762311671,10.0070119730192,9.13083005340284,43.1821446005506,16.6345944271251,18.0961350336194,20.4925166202385,12.6726656627428,43.1433316154026,45.8212665734352,55.9586977844772,0,0.342745537829186,0,1.01825663922657,0.775809948670503,0.771494018793504,0.885311519739602,2.65698266363284,1.41298855057237,3.45512058981041,0.889357881261447,0.500535317148282,0.982794975566015,0.899448449539415,2.02860121388503,4.58236603529592,4.07401362850272,5.17853047411459,1.62135226775035,1.92192989231657,2.87536413054709,1.48856379067401,3.12037673114561,1.26289438973556,0.358794827043824,1.92977408545347,2.21703828199926,0,0.325929952884052,0.169745085775188,0.234690248288502,0.670025029767263,2.14239276797412,1.36593553500459,1.26108115284953,0.221464689648775,0.318909537314974,2.78567635016755,1.89953480052485,2.16973587872267,0,0,0.983528546038072,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.325773918707152,0.824850614862677,1.32745138339963,8.49732226542435,8.76738315197778,19.4263232148575,10.6308681437078,11.0676653259814,10.3371317267288,6.90714086007261,9.26893183800275,11.0612865277536,9.48767477174989,7.21948802737308,0.340439605753788,0.900305470156551,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,3.28540391289194,4.02480934641258,10.8058915046931,21.9298716412168,19.2142667768128,13.2688434841943,19.218947384505,28.2322347561505,34.9777003955821,0.18542530201051,0,0.412773735926445,0.925972636848558,0,0.136694227721025,0,0,0,0,20.0480829783174,0.158167996790568,2.03319467126849,3.88819226958485,7.94535524854981,12.8833912610245,12.6772485601731,10.9929096114697,22.7727669526106,44.3283208657932,21.7468759580424,0,0.299033092087958,0.66183396182839,0.388902376688095,0.258319646955462,0.337912250981556,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0.948033361884535,0.608175645870493,0.718976700153791,0.25984164595559,0,0,0,0.590758108698309,0.201932899896295,0.0762068066549998,0.201652370273681,0.779663045918019,0.481059208201647,0.467507608726276,37.1837829128947,3.55177525398503,1.97370484540847,4.19711540910196,3.86379188064381,2.62755465631655,1.28206136987086,25.7242054894879,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.972426868273176,1.04806581313991,4.41224420280034,3.77819437262746,3.29656091582231,4.1719497246936,1.76888048234658,3.04175159868288,3.2066478035633,1.31098110457835,2.24088033417042,2.29741875822453,2.85776214769844,1.97003354106254,2.12200142510076,2.88460130562315,2.50238164228475,2.40008476669791,2.48466128623072,1.90748951957857,3.48831399917588,2.35273451038327,2.28459441307527,2.37806364734604,3.41990624869196,2.30866993537965,1.68342681497322,2.84724043498018,3.25064791839359,2.04615521584845,3.09873682371932,8.29498427218908,3.74715866906919,4.21076895201735,6.23126056740065,1.91288332068843,2.8676884485537,0.695603506861264 | ||
|short_description=p2@Chmp4c | |short_description=p2@Chmp4c | ||
}} | }} |
Latest revision as of 05:38, 27 September 2015
Short description: | p2@Chmp4c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Chmp4c_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_NM_025519, uc008opu.1, uc012cni.1_5end |
EntrezGene: | Chmp4c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.80e-08 | 9 |
epithelial cell of alimentary canal | 1.80e-08 | 9 |
epithelial cell | 2.38e-08 | 25 |
endo-epithelial cell | 5.64e-07 | 15 |
columnar/cuboidal epithelial cell | 8.98e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.03e-21 | 31 |
gastrointestinal system | 2.22e-19 | 47 |
mucosa | 3.97e-13 | 15 |
endoderm-derived structure | 8.64e-12 | 118 |
endoderm | 8.64e-12 | 118 |
presumptive endoderm | 8.64e-12 | 118 |
intestinal mucosa | 1.12e-11 | 13 |
wall of intestine | 1.12e-11 | 13 |
gastrointestinal system mucosa | 1.12e-11 | 13 |
digestive system | 3.43e-11 | 116 |
digestive tract | 3.43e-11 | 116 |
primitive gut | 3.43e-11 | 116 |
subdivision of digestive tract | 3.45e-10 | 114 |
simple columnar epithelium | 1.41e-08 | 11 |
organ component layer | 1.63e-08 | 24 |
epithelium of mucosa | 1.80e-08 | 9 |
gastrointestinal system epithelium | 1.80e-08 | 9 |
intestinal epithelium | 1.80e-08 | 9 |