FFCP PHASE1:Mm9::chr10:115614739..115614756,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19279 | |EntrezGene=19279 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q62132 | |UniProt=Q62132 | ||
|association_with_transcript=272bp_to_ENSMUST00000128399_5end | |association_with_transcript=272bp_to_ENSMUST00000128399_5end | ||
|cluster_id=chr10:115614739..115614756,+ | |||
|description=CAGE_peak_7_at_Ptprr_5end | |description=CAGE_peak_7_at_Ptprr_5end | ||
|id=chr10:115614739..115614756,+ | |id=chr10:115614739..115614756,+ | ||
|ontology_enrichment_celltype=CL:0000239!3.18e-12!6;CL:0000677!3.18e-12!6;CL:0000212!3.18e-12!6;CL:0000584!3.18e-12!6;CL:0000075!2.39e-10!7;CL:0002563!3.12e-10!9;CL:0002251!3.12e-10!9;CL:0000473!2.03e-07!3;CL:0000627!2.03e-07!3;CL:0000682!2.03e-07!3 | |ontology_enrichment_celltype=CL:0000239!3.18e-12!6;CL:0000677!3.18e-12!6;CL:0000212!3.18e-12!6;CL:0000584!3.18e-12!6;CL:0000075!2.39e-10!7;CL:0002563!3.12e-10!9;CL:0002251!3.12e-10!9;CL:0000473!2.03e-07!3;CL:0000627!2.03e-07!3;CL:0000682!2.03e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.03e-16,6;CL:0000677,2.03e-16,6;CL:0000584,2.03e-16,6;CL:0000075,4.75e-14,7;CL:0000682,4.54e-13,3;CL:0002563,6.96e-11,9;CL:0002251,6.96e-11,9;CL:0000066,3.09e-09,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.94e-23!43;UBERON:0005409!2.50e-21!59;UBERON:0000344!3.34e-21!15;UBERON:0001242!1.62e-17!13;UBERON:0000060!1.62e-17!13;UBERON:0001262!1.62e-17!13;UBERON:0004786!1.62e-17!13;UBERON:0004923!5.96e-14!24;UBERON:0003350!3.12e-10!9;UBERON:0004808!3.12e-10!9;UBERON:0001277!3.12e-10!9;UBERON:0001007!3.36e-08!128;UBERON:0001555!3.36e-08!128;UBERON:0007026!3.36e-08!128;UBERON:0000485!3.78e-08!11;UBERON:0004119!5.92e-08!130;UBERON:0000925!5.92e-08!130;UBERON:0006595!5.92e-08!130;UBERON:0000331!2.57e-07!3;UBERON:0002116!2.57e-07!3;UBERON:0001204!2.57e-07!3;UBERON:0001168!2.57e-07!3;UBERON:0004921!7.87e-07!126;UBERON:0004185!7.87e-07!126 | |ontology_enrichment_uberon=UBERON:0000160!4.94e-23!43;UBERON:0005409!2.50e-21!59;UBERON:0000344!3.34e-21!15;UBERON:0001242!1.62e-17!13;UBERON:0000060!1.62e-17!13;UBERON:0001262!1.62e-17!13;UBERON:0004786!1.62e-17!13;UBERON:0004923!5.96e-14!24;UBERON:0003350!3.12e-10!9;UBERON:0004808!3.12e-10!9;UBERON:0001277!3.12e-10!9;UBERON:0001007!3.36e-08!128;UBERON:0001555!3.36e-08!128;UBERON:0007026!3.36e-08!128;UBERON:0000485!3.78e-08!11;UBERON:0004119!5.92e-08!130;UBERON:0000925!5.92e-08!130;UBERON:0006595!5.92e-08!130;UBERON:0000331!2.57e-07!3;UBERON:0002116!2.57e-07!3;UBERON:0001204!2.57e-07!3;UBERON:0001168!2.57e-07!3;UBERON:0004921!7.87e-07!126;UBERON:0004185!7.87e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.54e-30,15;UBERON:0001242,1.02e-23,13;UBERON:0001262,1.02e-23,13;UBERON:0004786,1.02e-23,13;UBERON:0000160,1.65e-22,31;UBERON:0005409,1.78e-18,47;UBERON:0004923,2.16e-18,24;UBERON:0000331,7.18e-13,3;UBERON:0002116,7.18e-13,3;UBERON:0001204,7.18e-13,3;UBERON:0001168,7.18e-13,3;UBERON:0003350,6.96e-11,9;UBERON:0004808,6.96e-11,9;UBERON:0001277,6.96e-11,9;UBERON:0002108,9.04e-10,4;UBERON:0001962,6.02e-09,2;UBERON:0001961,6.02e-09,2;UBERON:0001744,6.02e-09,2;UBERON:0001007,6.88e-09,116;UBERON:0001555,6.88e-09,116;UBERON:0007026,6.88e-09,116;UBERON:0000485,7.29e-09,11;UBERON:0004119,1.11e-08,118;UBERON:0000925,1.11e-08,118;UBERON:0006595,1.11e-08,118;UBERON:0004921,7.61e-07,114 | |||
|phase1_expression=0,6.97950815278722,8.18998630901165,0.30246421130683,1.50268718983904,4.02910252588535,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,4.12936705920906,10.3361753540704,3.87685796543167,5.60225204983311,5.13063232532209,2.77233142735924,7.09537634096975,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,0.793351699990633,0,0,0,0.403367049246685,0.667134131534611,0.380451252225118,1.89811624617805,0.658795818896044,0.251335208800269,0.397912944082302,0.19496408711912,2.69645822596266,2.59365659849633,4.58024928485045,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.874442509889552,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,1.34864346384821,0.495920734352016,0.26175594198403,2.20345454596048,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54551675225752,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,6.97950815278722,8.18998630901165,0.30246421130683,1.50268718983904,4.02910252588535,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99981056983517,4.12936705920906,10.3361753540704,3.87685796543167,5.60225204983311,5.13063232532209,2.77233142735924,7.09537634096975,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,0.793351699990633,0,0,0,0.403367049246685,0.667134131534611,0.380451252225118,1.89811624617805,0.658795818896044,0.251335208800269,0.397912944082302,0.19496408711912,2.69645822596266,2.59365659849633,4.58024928485045,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0.874442509889552,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0,0,0,0,1.34864346384821,0.495920734352016,0.26175594198403,2.20345454596048,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54551675225752,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@Ptprr | |short_description=p7@Ptprr | ||
}} | }} |
Latest revision as of 15:08, 25 September 2015
Short description: | p7@Ptprr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ptprr_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 272bp_to_ENSMUST00000128399_5end |
EntrezGene: | Ptprr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.03e-16 | 6 |
gut absorptive cell | 2.03e-16 | 6 |
enterocyte | 2.03e-16 | 6 |
columnar/cuboidal epithelial cell | 4.75e-14 | 7 |
M cell of gut | 4.54e-13 | 3 |
intestinal epithelial cell | 6.96e-11 | 9 |
epithelial cell of alimentary canal | 6.96e-11 | 9 |
epithelial cell | 3.09e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.54e-30 | 15 |
intestinal mucosa | 1.02e-23 | 13 |
wall of intestine | 1.02e-23 | 13 |
gastrointestinal system mucosa | 1.02e-23 | 13 |
intestine | 1.65e-22 | 31 |
gastrointestinal system | 1.78e-18 | 47 |
organ component layer | 2.16e-18 | 24 |
ileal mucosa | 7.18e-13 | 3 |
ileum | 7.18e-13 | 3 |
mucosa of small intestine | 7.18e-13 | 3 |
wall of small intestine | 7.18e-13 | 3 |
epithelium of mucosa | 6.96e-11 | 9 |
gastrointestinal system epithelium | 6.96e-11 | 9 |
intestinal epithelium | 6.96e-11 | 9 |
small intestine | 9.04e-10 | 4 |
gut-associated lymphoid tissue | 6.02e-09 | 2 |
mucosa-associated lymphoid tissue | 6.02e-09 | 2 |
lymphoid tissue | 6.02e-09 | 2 |
digestive system | 6.88e-09 | 116 |
digestive tract | 6.88e-09 | 116 |
primitive gut | 6.88e-09 | 116 |
simple columnar epithelium | 7.29e-09 | 11 |
endoderm-derived structure | 1.11e-08 | 118 |
endoderm | 1.11e-08 | 118 |
presumptive endoderm | 1.11e-08 | 118 |
subdivision of digestive tract | 7.61e-07 | 114 |