Personal tools

FFCP PHASE1:Mm9::chr10:115254555..115254570,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=216350
|EntrezGene=216350
|HGNC=
|HGNC=
|MCL_coexpression_id=410
|TSSclassifier=NA
|UniProt=Q8R3G9
|UniProt=Q8R3G9
|association_with_transcript=215bp_to_ENSMUST00000035563,NM_146010,uc007hbo.2_5end
|association_with_transcript=215bp_to_ENSMUST00000035563,NM_146010,uc007hbo.2_5end
|cluster_id=chr10:115254555..115254570,+
|description=CAGE_peak_3_at_Tspan8_5end
|description=CAGE_peak_3_at_Tspan8_5end
|id=chr10:115254555..115254570,+
|id=chr10:115254555..115254570,+
|ontology_enrichment_celltype=CL:0002563!1.21e-07!9;CL:0002251!1.21e-07!9
|ontology_enrichment_celltype=CL:0002563!1.21e-07!9;CL:0002251!1.21e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002563,2.44e-09,9;CL:0002251,2.44e-09,9;CL:0000066,4.73e-08,25;CL:0002076,7.80e-08,15;CL:0000075,5.37e-07,7
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005409!8.79e-18!59;UBERON:0004119!1.67e-16!130;UBERON:0000925!1.67e-16!130;UBERON:0006595!1.67e-16!130;UBERON:0001007!6.37e-16!128;UBERON:0001555!6.37e-16!128;UBERON:0007026!6.37e-16!128;UBERON:0004921!1.19e-14!126;UBERON:0004185!1.19e-14!126;UBERON:0000344!2.54e-12!15;UBERON:0000160!3.20e-12!43;UBERON:0004923!1.96e-11!24;UBERON:0001242!1.07e-10!13;UBERON:0000060!1.07e-10!13;UBERON:0001262!1.07e-10!13;UBERON:0004786!1.07e-10!13;UBERON:0005178!9.22e-09!17;UBERON:0005181!9.22e-09!17;UBERON:0002224!9.22e-09!17;UBERON:0000915!9.22e-09!17;UBERON:0008947!9.22e-09!17;UBERON:0003258!9.22e-09!17;UBERON:0000485!6.42e-08!11;UBERON:0003350!1.21e-07!9;UBERON:0004808!1.21e-07!9;UBERON:0001277!1.21e-07!9;UBERON:0002048!1.74e-07!14;UBERON:0000117!1.74e-07!14;UBERON:0000171!1.74e-07!14;UBERON:0000170!1.74e-07!14;UBERON:0005597!1.74e-07!14;UBERON:0000118!1.74e-07!14;UBERON:0005153!6.00e-07!17
|ontology_enrichment_uberon=UBERON:0005409!8.79e-18!59;UBERON:0004119!1.67e-16!130;UBERON:0000925!1.67e-16!130;UBERON:0006595!1.67e-16!130;UBERON:0001007!6.37e-16!128;UBERON:0001555!6.37e-16!128;UBERON:0007026!6.37e-16!128;UBERON:0004921!1.19e-14!126;UBERON:0004185!1.19e-14!126;UBERON:0000344!2.54e-12!15;UBERON:0000160!3.20e-12!43;UBERON:0004923!1.96e-11!24;UBERON:0001242!1.07e-10!13;UBERON:0000060!1.07e-10!13;UBERON:0001262!1.07e-10!13;UBERON:0004786!1.07e-10!13;UBERON:0005178!9.22e-09!17;UBERON:0005181!9.22e-09!17;UBERON:0002224!9.22e-09!17;UBERON:0000915!9.22e-09!17;UBERON:0008947!9.22e-09!17;UBERON:0003258!9.22e-09!17;UBERON:0000485!6.42e-08!11;UBERON:0003350!1.21e-07!9;UBERON:0004808!1.21e-07!9;UBERON:0001277!1.21e-07!9;UBERON:0002048!1.74e-07!14;UBERON:0000117!1.74e-07!14;UBERON:0000171!1.74e-07!14;UBERON:0000170!1.74e-07!14;UBERON:0005597!1.74e-07!14;UBERON:0000118!1.74e-07!14;UBERON:0005153!6.00e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.47e-29,47;UBERON:0000160,2.36e-26,31;UBERON:0004119,2.20e-18,118;UBERON:0000925,2.20e-18,118;UBERON:0006595,2.20e-18,118;UBERON:0001007,2.66e-18,116;UBERON:0001555,2.66e-18,116;UBERON:0007026,2.66e-18,116;UBERON:0004921,9.99e-17,114;UBERON:0000344,2.60e-15,15;UBERON:0001242,3.12e-13,13;UBERON:0001262,3.12e-13,13;UBERON:0004786,3.12e-13,13;UBERON:0004923,1.74e-10,24;UBERON:0005178,8.30e-10,17;UBERON:0005181,8.30e-10,17;UBERON:0002224,8.30e-10,17;UBERON:0000915,8.30e-10,17;UBERON:0008947,8.30e-10,17;UBERON:0003258,8.30e-10,17;UBERON:0003350,2.44e-09,9;UBERON:0004808,2.44e-09,9;UBERON:0001277,2.44e-09,9;UBERON:0000485,1.46e-08,11;UBERON:0002048,3.48e-08,14;UBERON:0000117,3.48e-08,14;UBERON:0000171,3.48e-08,14;UBERON:0000170,3.48e-08,14;UBERON:0005597,3.48e-08,14;UBERON:0000118,3.48e-08,14;UBERON:0005153,5.51e-07,17
|phase1_expression=0.80074423552397,47.1116800313137,44.134926220785,14.215817931421,11.0197060588196,70.6771734749056,79.6619104430743,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0,0,0,1.10556277196391,0,0,107.674900539963,150.033669817929,75.2243872990676,78.3986833009516,73.0447478805164,132.256299941636,96.0234794385336,254.324895721635,0,0,0,55.4595109922447,73.6419478938121,61.8633149474978,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,7.8263411949453,0,0,0,0,0,4.77511028447956,0,0,0,4.92951969218382,0,0,0,4.97929394325792,5.32055717497707,9.0994400102661,16.4424786795446,0,0,0,0,0,0.150722640552623,0.117588707135705,0,14.0901131608593,0,0,0.323533699894818,0,0.484875253135222,42.8701050801681,0,0,32.9539601219083,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0,0,0.631325567659422,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0.102904612379284,23.1293148088659,34.3785736662608,2.98603550749328,5.80591679651096,9.02072229254653,9.88249270654378,10.8965241483986,13.3157938278791,23.7264530772256,16.6345944271251,7.54005626400809,7.36138946552258,9.16331209459865,20.6728463990471,30.0431889325825,31.46432117419,0.379335801906163,1.02823661348756,1.1270773567308,2.44381593414377,1.16371492300575,1.26244475802573,2.08680572510049,2.65698266363284,3.1399745568275,2.71473760627961,0.296452627087149,0.333690211432188,0.196558995113203,0,0.202860121388503,0.241177159752417,0.763877555344259,0.863088412352432,0.648540907100142,0.549122826376163,0,0.744281895337007,0,0,0.717589654087649,0,4.0645701836653,0.757965647081939,4.23708938749267,6.78980343100753,11.2651319178481,15.410575684647,14.0445748122748,12.6836871107569,7.56648691709717,6.42247599981447,7.97273843287435,7.70157579163969,7.08008425650172,10.1254341007058,0,0,0.983528546038072,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,5.1140738121486,0,0,0,0,0,0,1.55056975900933,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0.938686832254841,2.1183207086382,1.7642271844397,0.16488625294148,0,0,0.119372344003136,0,18.3632927076806,0,0.170870880797853,0,0.185194527369712,1.31857919903284,0.27338845544205,0.915112692826091,0,0,0,107.877779835708,3.79603192297362,7.31950081656655,15.0127423742304,21.9542710815192,24.6749697033181,17.5323650300267,19.3409086397286,68.8418127417998,54.6975187291366,1.86401793926078,0,0,0,0,0,0.168956125490778,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,4.056981474676,2.25218970541418,10.0733393346996,1.2862102744744,12.5393026008841,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.419226325255965,0.735374033800057,2.22246727801615,1.85431551515005,0.320919209591815,2.02157769411038,1.2673964994512,1.50901073108861,2.1537546718073,1.98477972455095,1.66562859971278,1.42888107384922,1.15884325944855,1.54327376370964,2.47251540481984,2.06078488188156,1.02860775715625,1.24233064311536,3.09967046931517,1.59881058295561,2.1645157495526,1.60767754994185,0.914639864363863,1.8414879800649,2.71608227691724,1.68342681497322,1.54225523561426,1.47756723563345,2.04615521584845,1.70430525304563,1.35034627686799,0,2.33931608445408,1.07435527024149,0.191288332068843,0,0
|phase1_expression=0.80074423552397,47.1116800313137,44.134926220785,14.215817931421,11.0197060588196,70.6771734749056,79.6619104430743,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0,0,0,1.10556277196391,0,0,107.674900539963,150.033669817929,75.2243872990676,78.3986833009516,73.0447478805164,132.256299941636,96.0234794385336,254.324895721635,0,0,0,55.4595109922447,73.6419478938121,61.8633149474978,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,7.8263411949453,0,0,0,0,0,4.77511028447956,0,0,0,4.92951969218382,0,0,0,4.97929394325792,5.32055717497707,9.0994400102661,16.4424786795446,0,0,0,0,0,0.150722640552623,0.117588707135705,0,14.0901131608593,0,0,0.323533699894818,0,0.484875253135222,42.8701050801681,0,0,32.9539601219083,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0,0,0.631325567659422,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0,0,0,0.233530684734339,0.16455984991348,0,0,0,0,0,0,0.102904612379284,23.1293148088659,34.3785736662608,2.98603550749328,5.80591679651096,9.02072229254653,9.88249270654378,10.8965241483986,13.3157938278791,23.7264530772256,16.6345944271251,7.54005626400809,7.36138946552258,9.16331209459865,20.6728463990471,30.0431889325825,31.46432117419,0.379335801906163,1.02823661348756,1.1270773567308,2.44381593414377,1.16371492300575,1.26244475802573,2.08680572510049,2.65698266363284,3.1399745568275,2.71473760627961,0.296452627087149,0.333690211432188,0.196558995113203,0,0.202860121388503,0.241177159752417,0.763877555344259,0.863088412352432,0.648540907100142,0.549122826376163,0,0.744281895337007,0,0,0.717589654087649,0,4.0645701836653,0.757965647081939,4.23708938749267,6.78980343100753,11.2651319178481,15.410575684647,14.0445748122748,12.6836871107569,7.56648691709717,6.42247599981447,7.97273843287435,7.70157579163969,7.08008425650172,10.1254341007058,0,0,0.983528546038072,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,5.1140738121486,0,0,0,0,0,0,1.55056975900933,0,0.356497378384721,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0.938686832254841,2.1183207086382,1.7642271844397,0.16488625294148,0,0,0.119372344003136,0,18.3632927076806,0,0.170870880797853,0,0.185194527369712,1.31857919903284,0.27338845544205,0.915112692826091,0,0,0,107.877779835708,3.79603192297362,7.31950081656655,15.0127423742304,21.9542710815192,24.6749697033181,17.5323650300267,19.3409086397286,68.8418127417998,54.6975187291366,1.86401793926078,0,0,0,0,0,0.168956125490778,0,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0.192423683280659,0.116876902181569,0.226730383615211,0,0,0,4.056981474676,2.25218970541418,10.0733393346996,1.2862102744744,12.5393026008841,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.419226325255965,0.735374033800057,2.22246727801615,1.85431551515005,0.320919209591815,2.02157769411038,1.2673964994512,1.50901073108861,2.1537546718073,1.98477972455095,1.66562859971278,1.42888107384922,1.15884325944855,1.54327376370964,2.47251540481984,2.06078488188156,1.02860775715625,1.24233064311536,3.09967046931517,1.59881058295561,2.1645157495526,1.60767754994185,0.914639864363863,1.8414879800649,2.71608227691724,1.68342681497322,1.54225523561426,1.47756723563345,2.04615521584845,1.70430525304563,1.35034627686799,0,2.33931608445408,1.07435527024149,0.191288332068843,0,0
|short_description=p3@Tspan8
|short_description=p3@Tspan8
}}
}}

Latest revision as of 15:04, 25 September 2015

Short description:p3@Tspan8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tspan8_5end
Coexpression cluster:MCL_coexpression_mm9:410
Association with transcript: 215bp_to_ENSMUST00000035563, NM_146010, uc007hbo.2_5end
EntrezGene:Tspan8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tspan8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I547.11
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I644.13
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.22
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I770.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I879.66
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1107.67
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2150.03
GP2+ M cell, pool1.CNhs13228.11845-124H975.22
GP2+ M cell, pool2.CNhs13231.11846-124I178.40
GP2+ M cell, pool3.CNhs13240.11847-124I273.04
Ileum epithelium, pool1.CNhs13199.10252-104B9132.26
Ileum epithelium, pool2.CNhs13232.10253-104C196.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8254.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F555.46
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F673.64
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F761.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B616.44
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A814.09
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H442.87
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H732.95
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I323.13
intestine, adult.CNhs10496.178-9A334.38
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D55.81
intestine, embryo E15.CNhs10602.976-16D89.02
intestine, embryo E16.CNhs10585.463-22H49.88
intestine, embryo E17.CNhs10582.482-18D310.90
intestine, embryo E18.CNhs10526.1289-20F713.32
intestine, neonate N00.CNhs11126.644-26D123.73
intestine, neonate N01.CNhs11192.1322-23E916.63
intestine, neonate N06.CNhs11102.688-20B87.54
intestine, neonate N07.CNhs11095.720-20F27.36
intestine, neonate N10.CNhs11098.755-23A59.16
intestine, neonate N20.CNhs11187.827-18D120.67
intestine, neonate N25.CNhs11121.1352-25E330.04
intestine, neonate N30.CNhs11131.1384-42G131.46
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D52.09
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C56.79
lung, embryo E16.CNhs10998.458-17B611.27
lung, embryo E17.CNhs10605.480-44A615.41
lung, embryo E18.CNhs10583.1287-20I614.04
lung, neonate N00.CNhs11224.640-42C612.68
lung, neonate N06.CNhs11212.683-20E57.57
lung, neonate N07.CNhs11111.715-19A36.42
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A47.70
lung, neonate N25.CNhs11119.1359-25C77.08
lung, neonate N30.CNhs11133.1394-42H210.13
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G65.11
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I118.36
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H6107.88
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G87.32
stomach, embryo E16.CNhs11022.459-17D415.01
stomach, embryo E17.CNhs11006.1035-18D521.95
stomach, embryo E18.CNhs10999.1286-20C624.67
stomach, neonate N03.CNhs11193.1340-24B817.53
stomach, neonate N07.CNhs11210.718-18A919.34
stomach, neonate N25.CNhs11104.1355-25E468.84
stomach, neonate N30.CNhs11134.1386-42I154.70
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.06
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E510.07
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F812.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system1.47e-2947
intestine2.36e-2631
endoderm-derived structure2.20e-18118
endoderm2.20e-18118
presumptive endoderm2.20e-18118
digestive system2.66e-18116
digestive tract2.66e-18116
primitive gut2.66e-18116
subdivision of digestive tract9.99e-17114
mucosa2.60e-1515
intestinal mucosa3.12e-1313
wall of intestine3.12e-1313
gastrointestinal system mucosa3.12e-1313
organ component layer1.74e-1024
thoracic cavity element8.30e-1017
thoracic segment organ8.30e-1017
thoracic cavity8.30e-1017
thoracic segment of trunk8.30e-1017
respiratory primordium8.30e-1017
endoderm of foregut8.30e-1017
epithelium of mucosa2.44e-099
gastrointestinal system epithelium2.44e-099
intestinal epithelium2.44e-099
simple columnar epithelium1.46e-0811
lung3.48e-0814
respiratory tube3.48e-0814
respiration organ3.48e-0814
pair of lungs3.48e-0814
lung primordium3.48e-0814
lung bud3.48e-0814
epithelial bud5.51e-0717
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:115254555..115254570,%2B&oldid=4198232"