FFCP PHASE1:Hg19::chr12:53228091..53228096,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338785 | |EntrezGene=338785 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28930 | |HGNC=28930 | ||
|TSSclassifier=strong | |||
|UniProt=Q5XKE5 | |UniProt=Q5XKE5 | ||
|association_with_transcript=-12bp_to_ENST00000330553_5end | |association_with_transcript=-12bp_to_ENST00000330553_5end | ||
|cluster_id=chr12:53228091..53228096,- | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_KRT79_5end | |description=CAGE_peak_1_at_KRT79_5end | ||
|id=chr12:53228091..53228096,- | |id=chr12:53228091..53228096,- | ||
|ontology_enrichment_celltype=CL:0000622!2.64e-22!5;CL:0002623!6.66e-21!3;CL:0000154!1.25e-18!6;CL:0000150!1.73e-12!9;CL:0002159!9.44e-09!13;CL:0000362!1.79e-08!8 | |ontology_enrichment_celltype=CL:0000622!2.64e-22!5;CL:0002623!6.66e-21!3;CL:0000154!1.25e-18!6;CL:0000150!1.73e-12!9;CL:0002159!9.44e-09!13;CL:0000362!1.79e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000622;2.58e-14;5!CL:0000154;4.30e-12;6!CL:0000317;9.46e-10;2!CL:1000448;9.46e-10;2!CL:0002308;9.46e-10;2!CL:0002140;9.46e-10;2!CL:0000362;2.05e-08;9!CL:0000150;2.29e-08;9!CL:0002623;8.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.95e-14,5;CL:0000154,4.81e-12,6;CL:0000317,9.46e-10,2;CL:1000448,9.46e-10,2;CL:0002308,9.46e-10,2;CL:0002140,9.46e-10,2;CL:0000362,2.05e-08,9;CL:0000150,2.46e-08,9;CL:0002623,9.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.16e-18;1!UBERON:0004874;1.44e-17;1 | |||
|ontology_enrichment_disease=DOID:1036!3.64e-08!8;DOID:3151!5.43e-08!1;DOID:3149!5.43e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!3.88e-17!10;UBERON:0000178!1.73e-11!15;UBERON:0000179!1.73e-11!15;UBERON:0000463!1.73e-11!15;UBERON:0001044!9.72e-11!6;UBERON:0003293!9.72e-11!6;UBERON:0003294!9.72e-11!6;UBERON:0010047!9.72e-11!6;UBERON:0000167!9.72e-11!6;UBERON:0007029!9.79e-09!1;UBERON:0000989!1.88e-08!1;UBERON:0008811!1.88e-08!1;UBERON:0006258!1.88e-08!1;UBERON:0005876!1.88e-08!1;UBERON:0004874!1.88e-08!1;UBERON:0001003!2.58e-08!14;UBERON:0007376!2.58e-08!14;UBERON:0007383!2.58e-08!14;UBERON:0000996!3.10e-08!1;UBERON:0002370!4.57e-08!4;UBERON:0005058!4.57e-08!4;UBERON:0009113!4.57e-08!4;UBERON:0003295!4.57e-08!4;UBERON:0005562!4.57e-08!4;UBERON:0000014!6.04e-08!4;UBERON:0003102!8.46e-07!95;UBERON:0000974!8.72e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.39e-33;2!UBERON:0005058;1.39e-33;2!UBERON:0009113;1.39e-33;2!UBERON:0007029;2.66e-18;1!UBERON:0000989;1.44e-17;1!UBERON:0008811;1.44e-17;1!UBERON:0004177;4.39e-14;5!UBERON:0005057;4.39e-14;5!UBERON:0001003;9.76e-11;15!UBERON:0007376;9.76e-11;15!UBERON:0002419;9.46e-10;2!UBERON:0007771;9.46e-10;2!UBERON:0003297;9.46e-10;2!UBERON:0001821;9.46e-10;2!UBERON:0003487;9.46e-10;2!UBERON:0001820;9.46e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.66e-18,1;UBERON:0000989,1.22e-17,1;UBERON:0008811,1.22e-17,1;UBERON:0006258,1.22e-17,1;UBERON:0005876,1.22e-17,1;UBERON:0004874,1.22e-17,1;UBERON:0002370,2.39e-17,4;UBERON:0005058,2.39e-17,4;UBERON:0009113,2.39e-17,4;UBERON:0003295,2.39e-17,4;UBERON:0005562,2.39e-17,4;UBERON:0003408,2.23e-15,10;UBERON:0003351,6.70e-12,6;UBERON:0001003,9.76e-11,15;UBERON:0007376,9.76e-11,15;UBERON:0007383,9.76e-11,15;UBERON:0004177,2.46e-10,7;UBERON:0005057,2.46e-10,7;UBERON:0002419,9.46e-10,2;UBERON:0007771,9.46e-10,2;UBERON:0003297,9.46e-10,2;UBERON:0001821,9.46e-10,2;UBERON:0003487,9.46e-10,2;UBERON:0001820,9.46e-10,2;UBERON:0005089,9.46e-10,2;UBERON:0005088,9.46e-10,2;UBERON:0000974,1.67e-07,10;UBERON:0001042,1.67e-07,10;UBERON:0009145,1.67e-07,10;UBERON:0006562,6.74e-07,11;UBERON:0009722,6.74e-07,11;UBERON:0007690,6.74e-07,11 | |||
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|short_description=p1@KRT79 | |short_description=p1@KRT79 | ||
}} | }} |
Latest revision as of 00:53, 19 September 2015
Short description: | p1@KRT79 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT79_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -12bp_to_ENST00000330553_5end |
EntrezGene: | KRT79 |
HGNC: | 28930 |
UniProt: | Q5XKE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.95e-14 | 5 |
protein secreting cell | 4.81e-12 | 6 |
sebum secreting cell | 9.46e-10 | 2 |
epithelial cell of sweat gland | 9.46e-10 | 2 |
epithelial cell of skin gland | 9.46e-10 | 2 |
acinar cell of sebaceous gland | 9.46e-10 | 2 |
epidermal cell | 2.05e-08 | 9 |
glandular epithelial cell | 2.46e-08 | 9 |
acinar cell of salivary gland | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface | 2.66e-18 | 1 |
penis | 1.22e-17 | 1 |
intromittent organ | 1.22e-17 | 1 |
lateral plate mesenchyme | 1.22e-17 | 1 |
undifferentiated genital tubercle | 1.22e-17 | 1 |
somatopleure | 1.22e-17 | 1 |
thymus | 2.39e-17 | 4 |
hemolymphoid system gland | 2.39e-17 | 4 |
thymic region | 2.39e-17 | 4 |
pharyngeal gland | 2.39e-17 | 4 |
thymus primordium | 2.39e-17 | 4 |
gland of gut | 2.23e-15 | 10 |
pharyngeal epithelium | 6.70e-12 | 6 |
skin epidermis | 9.76e-11 | 15 |
outer epithelium | 9.76e-11 | 15 |
enveloping layer of ectoderm | 9.76e-11 | 15 |
hemopoietic organ | 2.46e-10 | 7 |
immune organ | 2.46e-10 | 7 |
skin gland | 9.46e-10 | 2 |
epidermis gland | 9.46e-10 | 2 |
gland of integumental system | 9.46e-10 | 2 |
sebaceous gland | 9.46e-10 | 2 |
skin sebaceous gland | 9.46e-10 | 2 |
sweat gland | 9.46e-10 | 2 |
sweat gland placode | 9.46e-10 | 2 |
sebaceous gland placode | 9.46e-10 | 2 |
neck | 1.67e-07 | 10 |
chordate pharynx | 1.67e-07 | 10 |
pharyngeal region of foregut | 1.67e-07 | 10 |
pharynx | 6.74e-07 | 11 |
entire pharyngeal arch endoderm | 6.74e-07 | 11 |
early pharyngeal endoderm | 6.74e-07 | 11 |