FFCP PHASE1:Mm9::chr2:34420490..34420497,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=81 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENSMUST00000119822_5end | |association_with_transcript=-21bp_to_ENSMUST00000119822_5end | ||
|cluster_id=chr2:34420490..34420497,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000119822_5end | |description=CAGE_peak_1_at_ENSMUST00000119822_5end | ||
|id=chr2:34420490..34420497,+ | |id=chr2:34420490..34420497,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.80e-09!32;CL:0002032!1.80e-09!32;CL:0000037!1.80e-09!32;CL:0000566!1.80e-09!32;CL:0000837!1.80e-09!32;CL:0000542!3.38e-09!13;CL:0000051!3.38e-09!13;CL:0000838!3.61e-09!12;CL:0000084!1.64e-08!11;CL:0000827!1.64e-08!11;CL:0000063!5.60e-08!66;CL:0000791!2.43e-07!9;CL:0000789!2.43e-07!9;CL:0002420!2.43e-07!9;CL:0002419!2.43e-07!9;CL:0000790!2.43e-07!9;CL:0000738!2.72e-07!17;CL:0002087!2.72e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.55e-09,32;CL:0002032,1.55e-09,32;CL:0000037,1.55e-09,32;CL:0000837,1.55e-09,32;CL:0000542,3.36e-09,13;CL:0000051,3.36e-09,13;CL:0000838,3.59e-09,12;CL:0000084,1.63e-08,11;CL:0000827,1.63e-08,11;CL:0000791,2.42e-07,9;CL:0000789,2.42e-07,9;CL:0002420,2.42e-07,9;CL:0002419,2.42e-07,9;CL:0000790,2.42e-07,9;CL:0000738,2.55e-07,17;CL:0002087,2.55e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.12e-08!48;UBERON:0004177!1.21e-07!29;UBERON:0002390!1.35e-07!45;UBERON:0003061!1.35e-07!45;UBERON:0000072!2.60e-07!27;UBERON:0003104!3.93e-07!131;UBERON:0009142!3.93e-07!131;UBERON:0001007!4.85e-07!128;UBERON:0001555!4.85e-07!128;UBERON:0007026!4.85e-07!128;UBERON:0000926!7.55e-07!193;UBERON:0004120!7.55e-07!193;UBERON:0006603!7.55e-07!193;UBERON:0001041!8.58e-07!92;UBERON:0004119!9.27e-07!130;UBERON:0000925!9.27e-07!130;UBERON:0006595!9.27e-07!130;UBERON:0002370!9.34e-07!23;UBERON:0000974!9.34e-07!23;UBERON:0004807!9.34e-07!23;UBERON:0005058!9.34e-07!23;UBERON:0003351!9.34e-07!23;UBERON:0009113!9.34e-07!23;UBERON:0003295!9.34e-07!23;UBERON:0009722!9.34e-07!23;UBERON:0005562!9.34e-07!23;UBERON:0007690!9.34e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.72e-08,48;UBERON:0002405,3.72e-08,48;UBERON:0004177,1.21e-07,29;UBERON:0005057,1.21e-07,29;UBERON:0002390,1.21e-07,45;UBERON:0003061,1.21e-07,45;UBERON:0000072,2.59e-07,27;UBERON:0000077,5.87e-07,35;UBERON:0002370,9.30e-07,23;UBERON:0000974,9.30e-07,23;UBERON:0004807,9.30e-07,23;UBERON:0005058,9.30e-07,23;UBERON:0003351,9.30e-07,23;UBERON:0009113,9.30e-07,23;UBERON:0003295,9.30e-07,23;UBERON:0009722,9.30e-07,23;UBERON:0005562,9.30e-07,23;UBERON:0007690,9.30e-07,23 | |||
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| ||
|short_description=p1@ENSMUST00000119822 | |short_description=p1@ENSMUST00000119822 | ||
}} | }} |
Latest revision as of 02:28, 5 August 2015
Short description: | p1@ENSMUST00000119822 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000119822_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | -21bp_to_ENSMUST00000119822_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.55e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.55e-09 | 32 |
hematopoietic stem cell | 1.55e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.55e-09 | 32 |
lymphocyte | 3.36e-09 | 13 |
common lymphoid progenitor | 3.36e-09 | 13 |
lymphoid lineage restricted progenitor cell | 3.59e-09 | 12 |
T cell | 1.63e-08 | 11 |
pro-T cell | 1.63e-08 | 11 |
mature alpha-beta T cell | 2.42e-07 | 9 |
alpha-beta T cell | 2.42e-07 | 9 |
immature T cell | 2.42e-07 | 9 |
mature T cell | 2.42e-07 | 9 |
immature alpha-beta T cell | 2.42e-07 | 9 |
leukocyte | 2.55e-07 | 17 |
nongranular leukocyte | 2.55e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.72e-08 | 48 |
immune system | 3.72e-08 | 48 |
hemopoietic organ | 1.21e-07 | 29 |
immune organ | 1.21e-07 | 29 |
hematopoietic system | 1.21e-07 | 45 |
blood island | 1.21e-07 | 45 |
segment of respiratory tract | 2.59e-07 | 27 |
mixed endoderm/mesoderm-derived structure | 5.87e-07 | 35 |
thymus | 9.30e-07 | 23 |
neck | 9.30e-07 | 23 |
respiratory system epithelium | 9.30e-07 | 23 |
hemolymphoid system gland | 9.30e-07 | 23 |
pharyngeal epithelium | 9.30e-07 | 23 |
thymic region | 9.30e-07 | 23 |
pharyngeal gland | 9.30e-07 | 23 |
entire pharyngeal arch endoderm | 9.30e-07 | 23 |
thymus primordium | 9.30e-07 | 23 |
early pharyngeal endoderm | 9.30e-07 | 23 |