FFCP PHASE1:Mm9::chr2:20658933..20658948,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=208618 | |EntrezGene=208618 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=195 | |||
|TSSclassifier=NA | |||
|UniProt=A2AQ25 | |UniProt=A2AQ25 | ||
|association_with_transcript=0bp_to_ENSMUST00000114606,ENSMUST00000114608,uc008imu.1_5end | |association_with_transcript=0bp_to_ENSMUST00000114606,ENSMUST00000114608,uc008imu.1_5end | ||
|cluster_id=chr2:20658933..20658948,+ | |||
|description=CAGE_peak_5_at_Etl4_5end | |description=CAGE_peak_5_at_Etl4_5end | ||
|id=chr2:20658933..20658948,+ | |id=chr2:20658933..20658948,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.16e-08,9;CL:0002251,4.16e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.61e-14!43;UBERON:0005409!2.50e-12!59;UBERON:0000344!3.44e-10!15;UBERON:0001242!4.64e-09!13;UBERON:0000060!4.64e-09!13;UBERON:0001262!4.64e-09!13;UBERON:0004786!4.64e-09!13;UBERON:0005156!1.85e-08!26;UBERON:0000990!1.85e-08!26;UBERON:0003133!2.17e-08!24;UBERON:0003135!9.13e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.89e-22,31;UBERON:0005409,1.01e-20,47;UBERON:0000344,4.43e-13,15;UBERON:0001242,1.42e-11,13;UBERON:0001262,1.42e-11,13;UBERON:0004786,1.42e-11,13;UBERON:0003133,4.44e-10,24;UBERON:0005156,1.33e-09,26;UBERON:0000990,1.33e-09,26;UBERON:0004923,3.79e-09,24;UBERON:0003350,4.16e-08,9;UBERON:0004808,4.16e-08,9;UBERON:0001277,4.16e-08,9;UBERON:0003135,1.76e-07,15;UBERON:0000991,2.27e-07,18;UBERON:0005564,2.27e-07,18;UBERON:0000473,2.57e-07,14;UBERON:0004176,3.23e-07,17;UBERON:0009196,3.23e-07,17;UBERON:0009117,3.23e-07,17;UBERON:0003101,9.67e-07,16;UBERON:0000079,9.67e-07,16 | |||
|phase1_expression=0.480446541314382,16.7508195666893,21.8399634906977,43.5548464281835,35.0627010962443,9.06548068324205,11.6806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0.0992909512008853,0,13.5993559374396,11.4704640533585,17.2269589234506,15.0766698655676,13.574687659211,29.2636065962816,23.1867719379136,9.75614246883341,0,0,0,7.79899373328441,4.65457007003779,5.71674197534634,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0.218025156380447,0,0,1.53985063787899,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,1.69422266034566,9.78224275722253,0.899899717281399,0,0,1.19840044207362,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.151452386666368,0.151143120213571,4.05810284182349,0,0.679971333707751,0,0,0,1.26399978118577,4.26075806445144,2.59786004602869,1.41335829804136,0.281686839553361,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,5.82337786567206,0,1.63286352971307,0.867426633830679,0.608930956624282,1.15307748628029,0.452167921657868,1.76383060703557,0.502666365318702,6.67426412882809,0.289198713839823,0.884610551949874,1.13236794963186,1.32504911076236,0.969750506270444,46.5979403045305,0,0,23.5020490791904,0,0,0,0.149790639404823,0.457500602818626,0,1.39059456153821,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,2.11491850037158,1.26361379216837,1.47309299120532,0.130120442962704,0,0,0.30140963567143,0.816437989815934,0,0.374806898238915,2.32833033665114,0,0,0.175951124163949,0,0,0.348252166522167,1.02891068203972,1.19420560091096,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0.465067889500816,0,0.116765342367169,0.493679549740441,0.164167464079095,0.162137619091711,0,0,0,0.210289948564127,0.102904612379284,59.1449621540998,18.7759902331116,0,0.696710015581316,5.41243337552792,12.7060620512706,11.5636582799333,9.70150693174052,14.2358718463353,9.0584425098206,11.8127548136127,19.0998213159505,13.6474860983384,22.4704852163555,23.1267713365923,25.490082976559,0.189667900953082,0.456994050438915,0,0.203651327845314,0.581857461502877,0.841629838683823,0.569128834118316,0.147610147979602,0.470996183524124,0.863780147452604,0.296452627087149,0,0,0,0,0.72353147925725,0.763877555344259,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,1.24815069245824,0.757736633841335,0.179397413521912,0.482443521363367,1.10851914099963,0,0,0,0,0,0,0.975668239288994,0.157635144106191,0.664394068946325,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0.321101179975584,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,5.46246237917072,6.24536374916382,0,1.14020871547503,1.31976098378028,0,0.242780636154981,0,0.377210159511796,1.18120757152309,0.307435147943927,1.80899805217755,0.727067458955011,0.712994756769443,2.21225730555071,0,1.03135543248187,1.36175842301515,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.356737635204141,0.493647061806363,1.2178597964584,7.50949465803873,1.90648863777438,0.661585194164886,5.27636009412736,1.61464426695906,1.14594557363496,0.238744688006273,2.1338316966858,12.5336759750836,0.18542530201051,0,0,0,0,0,0,0,0,0,6.68269432610579,0,1.42323626988794,2.48412283890143,2.92723614420256,4.14888871117737,3.50647300600534,4.62859352061881,4.18809507174447,27.3487593645683,0,6.76431526421028,6.57872802593507,6.28742263736971,5.83353565032143,6.45799117388655,7.26511339610346,10.0927225235348,14.0620735631466,26.6342734841306,14.0118790079084,10.657110231541,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0.360586348559907,0,0.100966449948148,0,0,0,0.0962118416403295,0,5.66825959038028,0,0.0897138566094757,0,3.86379188064381,2.81523713176773,4.2124873581471,8.57473516316263,0.501572104035363,0.564751842617067,0.920650473014354,1.14579102687879,1.03111909406213,0.685082519770642,0.755393897389701,0,0.45032120322422,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0.729320151204882,0.209613162627982,1.2869045591501,1.77797382241292,1.03017528619447,0.64183841918363,0.758091635291392,1.77435509923168,1.13175804831646,0.936415074698824,1.21647789569252,1.32101578597911,1.42888107384922,1.15884325944855,1.54327376370964,2.06042950401653,1.47198920134397,0.342869252385415,1.06485483695602,0.953744759789284,1.74415699958794,1.41164070622996,1.60767754994185,1.09756783723664,1.57841826862706,1.35804113845862,2.24456908663095,1.42362021749009,0.689531376628944,1.22769312950907,0.464810523557898,2.12197272079256,0.499621155875892,2.33931608445408,3.43793686477277,1.53030665655075,1.32354851471709,1.62307484934295 | |phase1_expression=0.480446541314382,16.7508195666893,21.8399634906977,43.5548464281835,35.0627010962443,9.06548068324205,11.6806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,3.656861476496,0.0992909512008853,0,13.5993559374396,11.4704640533585,17.2269589234506,15.0766698655676,13.574687659211,29.2636065962816,23.1867719379136,9.75614246883341,0,0,0,7.79899373328441,4.65457007003779,5.71674197534634,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0.218025156380447,0,0,1.53985063787899,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,1.69422266034566,9.78224275722253,0.899899717281399,0,0,1.19840044207362,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.151452386666368,0.151143120213571,4.05810284182349,0,0.679971333707751,0,0,0,1.26399978118577,4.26075806445144,2.59786004602869,1.41335829804136,0.281686839553361,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,5.82337786567206,0,1.63286352971307,0.867426633830679,0.608930956624282,1.15307748628029,0.452167921657868,1.76383060703557,0.502666365318702,6.67426412882809,0.289198713839823,0.884610551949874,1.13236794963186,1.32504911076236,0.969750506270444,46.5979403045305,0,0,23.5020490791904,0,0,0,0.149790639404823,0.457500602818626,0,1.39059456153821,0.255715457330331,0.20778804455956,0.162241263067758,0.305518091550949,2.11491850037158,1.26361379216837,1.47309299120532,0.130120442962704,0,0,0.30140963567143,0.816437989815934,0,0.374806898238915,2.32833033665114,0,0,0.175951124163949,0,0,0.348252166522167,1.02891068203972,1.19420560091096,0,0.257347907114715,0,0,0,0,0.23674473558521,0,0,0.465067889500816,0,0.116765342367169,0.493679549740441,0.164167464079095,0.162137619091711,0,0,0,0.210289948564127,0.102904612379284,59.1449621540998,18.7759902331116,0,0.696710015581316,5.41243337552792,12.7060620512706,11.5636582799333,9.70150693174052,14.2358718463353,9.0584425098206,11.8127548136127,19.0998213159505,13.6474860983384,22.4704852163555,23.1267713365923,25.490082976559,0.189667900953082,0.456994050438915,0,0.203651327845314,0.581857461502877,0.841629838683823,0.569128834118316,0.147610147979602,0.470996183524124,0.863780147452604,0.296452627087149,0,0,0,0,0.72353147925725,0.763877555344259,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,1.24815069245824,0.757736633841335,0.179397413521912,0.482443521363367,1.10851914099963,0,0,0,0,0,0,0.975668239288994,0.157635144106191,0.664394068946325,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0.321101179975584,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,5.46246237917072,6.24536374916382,0,1.14020871547503,1.31976098378028,0,0.242780636154981,0,0.377210159511796,1.18120757152309,0.307435147943927,1.80899805217755,0.727067458955011,0.712994756769443,2.21225730555071,0,1.03135543248187,1.36175842301515,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.356737635204141,0.493647061806363,1.2178597964584,7.50949465803873,1.90648863777438,0.661585194164886,5.27636009412736,1.61464426695906,1.14594557363496,0.238744688006273,2.1338316966858,12.5336759750836,0.18542530201051,0,0,0,0,0,0,0,0,0,6.68269432610579,0,1.42323626988794,2.48412283890143,2.92723614420256,4.14888871117737,3.50647300600534,4.62859352061881,4.18809507174447,27.3487593645683,0,6.76431526421028,6.57872802593507,6.28742263736971,5.83353565032143,6.45799117388655,7.26511339610346,10.0927225235348,14.0620735631466,26.6342734841306,14.0118790079084,10.657110231541,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0,0.360586348559907,0,0.100966449948148,0,0,0,0.0962118416403295,0,5.66825959038028,0,0.0897138566094757,0,3.86379188064381,2.81523713176773,4.2124873581471,8.57473516316263,0.501572104035363,0.564751842617067,0.920650473014354,1.14579102687879,1.03111909406213,0.685082519770642,0.755393897389701,0,0.45032120322422,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0.729320151204882,0.209613162627982,1.2869045591501,1.77797382241292,1.03017528619447,0.64183841918363,0.758091635291392,1.77435509923168,1.13175804831646,0.936415074698824,1.21647789569252,1.32101578597911,1.42888107384922,1.15884325944855,1.54327376370964,2.06042950401653,1.47198920134397,0.342869252385415,1.06485483695602,0.953744759789284,1.74415699958794,1.41164070622996,1.60767754994185,1.09756783723664,1.57841826862706,1.35804113845862,2.24456908663095,1.42362021749009,0.689531376628944,1.22769312950907,0.464810523557898,2.12197272079256,0.499621155875892,2.33931608445408,3.43793686477277,1.53030665655075,1.32354851471709,1.62307484934295 | ||
|short_description=p5@Etl4 | |short_description=p5@Etl4 | ||
}} | }} |
Latest revision as of 08:52, 26 September 2015
Short description: | p5@Etl4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Etl4_5end |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | 0bp_to_ENSMUST00000114606, ENSMUST00000114608, uc008imu.1_5end |
EntrezGene: | Etl4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.16e-08 | 9 |
epithelial cell of alimentary canal | 4.16e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.89e-22 | 31 |
gastrointestinal system | 1.01e-20 | 47 |
mucosa | 4.43e-13 | 15 |
intestinal mucosa | 1.42e-11 | 13 |
wall of intestine | 1.42e-11 | 13 |
gastrointestinal system mucosa | 1.42e-11 | 13 |
reproductive organ | 4.44e-10 | 24 |
reproductive structure | 1.33e-09 | 26 |
reproductive system | 1.33e-09 | 26 |
organ component layer | 3.79e-09 | 24 |
epithelium of mucosa | 4.16e-08 | 9 |
gastrointestinal system epithelium | 4.16e-08 | 9 |
intestinal epithelium | 4.16e-08 | 9 |
male reproductive organ | 1.76e-07 | 15 |
gonad | 2.27e-07 | 18 |
gonad primordium | 2.27e-07 | 18 |
testis | 2.57e-07 | 14 |
external genitalia | 3.23e-07 | 17 |
indifferent external genitalia | 3.23e-07 | 17 |
indifferent gonad | 3.23e-07 | 17 |
male organism | 9.67e-07 | 16 |
male reproductive system | 9.67e-07 | 16 |