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FFCP PHASE1:Mm9::chr2:162486785..162486794,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19281
|EntrezGene=19281
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=B1AQN2
|UniProt=B1AQN2
|association_with_transcript=35bp_to_ENSMUST00000109442_5end
|association_with_transcript=35bp_to_ENSMUST00000109442_5end
|cluster_id=chr2:162486785..162486794,-
|description=CAGE_peak_2_at_Ptprt_5end
|description=CAGE_peak_2_at_Ptprt_5end
|id=chr2:162486785..162486794,-
|id=chr2:162486785..162486794,-
|ontology_enrichment_celltype=CL:0000117!2.94e-12!23;CL:0000337!2.94e-12!23;CL:0000540!2.36e-10!33;CL:0000047!2.36e-10!33;CL:0000031!2.36e-10!33;CL:0000404!2.36e-10!33;CL:0000221!4.63e-10!44;CL:0000133!4.63e-10!44;CL:0002319!1.34e-09!43;CL:0000393!7.58e-07!39;CL:0000211!7.58e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,6.13e-19,23;CL:0000337,6.13e-19,23;CL:0000540,1.78e-11,33;CL:0000047,1.78e-11,33;CL:0000031,1.78e-11,33;CL:0000404,1.78e-11,33;CL:0000221,3.86e-09,44;CL:0000133,3.86e-09,44;CL:0000393,6.91e-09,39;CL:0000211,6.91e-09,39;CL:0002319,1.88e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!6.21e-28!73;UBERON:0005743!6.21e-28!73;UBERON:0000073!1.20e-27!75;UBERON:0001016!1.20e-27!75;UBERON:0000033!7.60e-27!63;UBERON:0001049!8.04e-26!52;UBERON:0005068!8.04e-26!52;UBERON:0006241!8.04e-26!52;UBERON:0007135!8.04e-26!52;UBERON:0000955!1.98e-24!50;UBERON:0006238!1.98e-24!50;UBERON:0002346!2.46e-24!71;UBERON:0003075!2.46e-24!71;UBERON:0007284!2.46e-24!71;UBERON:0004121!4.02e-24!102;UBERON:0000924!4.02e-24!102;UBERON:0006601!4.02e-24!102;UBERON:0002616!1.38e-23!49;UBERON:0003056!8.65e-21!49;UBERON:0003080!1.02e-19!40;UBERON:0002020!1.41e-19!34;UBERON:0002780!5.58e-19!39;UBERON:0001890!5.58e-19!39;UBERON:0006240!5.58e-19!39;UBERON:0002791!3.21e-16!29;UBERON:0003528!3.21e-16!29;UBERON:0001893!3.21e-16!29;UBERON:0007811!4.93e-14!86;UBERON:0000153!9.56e-14!94;UBERON:0000956!9.47e-12!21;UBERON:0001869!9.47e-12!21;UBERON:0000203!9.47e-12!21;UBERON:0002619!1.25e-09!17;UBERON:0002021!2.15e-08!10;UBERON:0000411!2.15e-08!10;UBERON:0001950!2.15e-08!10;UBERON:0004111!3.41e-08!122;UBERON:0000025!8.51e-08!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.88e-41,54;UBERON:0001049,1.01e-38,52;UBERON:0005068,1.01e-38,52;UBERON:0006241,1.01e-38,52;UBERON:0007135,1.01e-38,52;UBERON:0001017,6.78e-36,73;UBERON:0001016,1.45e-34,75;UBERON:0002346,1.78e-32,64;UBERON:0003075,1.78e-32,64;UBERON:0007284,1.78e-32,64;UBERON:0000955,2.14e-32,47;UBERON:0006238,2.14e-32,47;UBERON:0002020,3.79e-32,34;UBERON:0002616,6.94e-31,46;UBERON:0010371,1.93e-28,73;UBERON:0004121,2.10e-28,95;UBERON:0000924,2.10e-28,95;UBERON:0006601,2.10e-28,95;UBERON:0003080,1.75e-27,40;UBERON:0002780,3.88e-26,39;UBERON:0001890,3.88e-26,39;UBERON:0006240,3.88e-26,39;UBERON:0003528,1.21e-25,29;UBERON:0002791,1.21e-25,29;UBERON:0001893,1.21e-25,29;UBERON:0003056,7.92e-24,49;UBERON:0010314,6.44e-20,92;UBERON:0000956,5.49e-17,21;UBERON:0001869,5.49e-17,21;UBERON:0000203,5.49e-17,21;UBERON:0002021,4.09e-15,10;UBERON:0000411,4.09e-15,10;UBERON:0001950,4.09e-15,10;UBERON:0002619,6.34e-13,17;UBERON:0000025,1.05e-12,114;UBERON:0004111,6.67e-12,122;UBERON:0003076,3.09e-11,12;UBERON:0003057,3.09e-11,12;UBERON:0002420,7.54e-10,8;UBERON:0007245,7.54e-10,8;UBERON:0010009,7.54e-10,8;UBERON:0010011,7.54e-10,8;UBERON:0000454,7.54e-10,8;UBERON:0002240,7.19e-09,6;UBERON:0005174,7.19e-09,6;UBERON:0001137,7.19e-09,6;UBERON:0001948,1.08e-07,5;UBERON:0002315,1.08e-07,5;UBERON:0000369,6.40e-07,5;UBERON:0002435,6.40e-07,5;UBERON:0000204,6.40e-07,5;UBERON:0010082,6.40e-07,5;UBERON:0011216,8.08e-07,194
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,2.22548106945558,0.528990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,1.15265491596466,1.34796496001021,1.89008313664367,1.05162480675691,3.14216082844184,2.42955395046775,1.34739879136449,0.191690942036473,0.919218786610021,2.20231761998777,3.31987079021488,2.76491759861238,3.03338461779446,1.73826522844578,1.04182674111352,1.3959149950069,1.68828783009504,2.44477196442896,4.12480019663135,5.12538050876771,2.23679334990361,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.69012103732017,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0,0,0.608930956624282,0,0.452167921657868,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,2.92780797011547,4.1889341362691,0,0,0,0,4.34392854273986,4.11750542536764,3.5183218591602,8.8650403298061,8.18289463457058,3.53239675751252,5.353961681236,0,0.124406970610093,0,0.420883711772948,0.650602214813519,0.229902104433473,0.180062129805349,0.452114453507145,1.42876648217788,0.512454881139399,1.59292931751539,0.258703370739016,0.431135985865684,1.32374256117473,1.40760899331159,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,2.94405927989778,1.74937841044784,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0.571242563048644,0,0.610953983535943,0,0.420814919341911,0,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,0.823684239564244,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.664394068946325,1.11618338060241,0,0.345369963731791,0.144649058581512,0,0,0,0.551873492609465,4.49541651965817,3.8679856575427,0,0,0.631016438832513,0.390438744296638,0.646270193198397,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,9.96096080907602,0.425820255624806,0,0.325773918707152,0,1.32745138339963,0,0,0,0.590603785761546,1.22974059177571,0.258428293168221,0.727067458955011,1.06949213515416,0,0,0,0,1.62054984628179,1.03486947026204,0.857348140126369,0.886701168211368,1.78368817602071,0.987294123612726,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,2.96680483216816,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0,0.743881101528023,0,0.129614973291793,0.621339313086926,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0.513554785824136,0,0.179026695667481,0.198681354781265,0,0.295379054349154,0,0,0,0,0,0,0.680191150845634,0,0.269141569828427,0,0.19318959403219,0,0,0,0,3.3885110557024,1.84130094602871,5.15605962095457,8.42080593484069,5.48066015816514,4.5323633843382,4.05013500139084,4.95353323546643,6.79713613476307,4.14208249401456,0.207574695168353,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,1.10306105070008,0.666740183404846,0.412070114477788,1.28367683836726,1.01078884705519,1.52087579934144,1.69763707247469,0.936415074698824,0.512201219238954,0.516919220600519,0.952587382566147,1.27472758539341,0.578727661391115,1.23625770240992,1.32479028120958,0.685738504770831,0.177475806159338,0.715308569841963,1.0174249164263,0.470546902076653,0.930760686808441,0.914639864363863,0.526139422875686,0.543216455383447,0.561142271657738,0.474540072496697,0.985044823755635,0.818462086339379,0.929621047115796,0.385813221962283,0.999242311751784,0.701794825336225,0.859484216193193,0,0.220591419119515,0
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,2.22548106945558,0.528990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,1.15265491596466,1.34796496001021,1.89008313664367,1.05162480675691,3.14216082844184,2.42955395046775,1.34739879136449,0.191690942036473,0.919218786610021,2.20231761998777,3.31987079021488,2.76491759861238,3.03338461779446,1.73826522844578,1.04182674111352,1.3959149950069,1.68828783009504,2.44477196442896,4.12480019663135,5.12538050876771,2.23679334990361,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,1.69012103732017,0,0,0,0,0.253359865475099,0,0.34255163915718,0,0,0,0.608930956624282,0,0.452167921657868,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,2.92780797011547,4.1889341362691,0,0,0,0,4.34392854273986,4.11750542536764,3.5183218591602,8.8650403298061,8.18289463457058,3.53239675751252,5.353961681236,0,0.124406970610093,0,0.420883711772948,0.650602214813519,0.229902104433473,0.180062129805349,0.452114453507145,1.42876648217788,0.512454881139399,1.59292931751539,0.258703370739016,0.431135985865684,1.32374256117473,1.40760899331159,0.219195732427575,0.278047249225598,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,2.94405927989778,1.74937841044784,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0.38992817423824,0,0,0,0.189667900953082,0.571242563048644,0,0.610953983535943,0,0.420814919341911,0,0,0,0,0,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.162135226775035,0.823684239564244,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0.157635144106191,0.664394068946325,1.11618338060241,0,0.345369963731791,0.144649058581512,0,0,0,0.551873492609465,4.49541651965817,3.8679856575427,0,0,0.631016438832513,0.390438744296638,0.646270193198397,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,9.96096080907602,0.425820255624806,0,0.325773918707152,0,1.32745138339963,0,0,0,0.590603785761546,1.22974059177571,0.258428293168221,0.727067458955011,1.06949213515416,0,0,0,0,1.62054984628179,1.03486947026204,0.857348140126369,0.886701168211368,1.78368817602071,0.987294123612726,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0.291480836629851,2.96680483216816,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0.436725127492355,0,0.743881101528023,0,0.129614973291793,0.621339313086926,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0.513554785824136,0,0.179026695667481,0.198681354781265,0,0.295379054349154,0,0,0,0,0,0,0.680191150845634,0,0.269141569828427,0,0.19318959403219,0,0,0,0,3.3885110557024,1.84130094602871,5.15605962095457,8.42080593484069,5.48066015816514,4.5323633843382,4.05013500139084,4.95353323546643,6.79713613476307,4.14208249401456,0.207574695168353,0.399024873401031,0.512200817262403,0.486213434136588,0.209613162627982,1.10306105070008,0.666740183404846,0.412070114477788,1.28367683836726,1.01078884705519,1.52087579934144,1.69763707247469,0.936415074698824,0.512201219238954,0.516919220600519,0.952587382566147,1.27472758539341,0.578727661391115,1.23625770240992,1.32479028120958,0.685738504770831,0.177475806159338,0.715308569841963,1.0174249164263,0.470546902076653,0.930760686808441,0.914639864363863,0.526139422875686,0.543216455383447,0.561142271657738,0.474540072496697,0.985044823755635,0.818462086339379,0.929621047115796,0.385813221962283,0.999242311751784,0.701794825336225,0.859484216193193,0,0.220591419119515,0
|short_description=p2@Ptprt
|short_description=p2@Ptprt
}}
}}

Latest revision as of 01:38, 26 September 2015

Short description:p2@Ptprt
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ptprt_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 35bp_to_ENSMUST00000109442_5end
EntrezGene:Ptprt
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ptprt

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.23
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D58.87
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I99.96
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.13e-1923
neuroblast (sensu Vertebrata)6.13e-1923
neuron1.78e-1133
neuronal stem cell1.78e-1133
neuroblast1.78e-1133
electrically signaling cell1.78e-1133
ectodermal cell3.86e-0944
neurectodermal cell3.86e-0944
electrically responsive cell6.91e-0939
electrically active cell6.91e-0939
neural cell1.88e-0843

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.88e-4154
neural tube1.01e-3852
neural rod1.01e-3852
future spinal cord1.01e-3852
neural keel1.01e-3852
central nervous system6.78e-3673
nervous system1.45e-3475
neurectoderm1.78e-3264
neural plate1.78e-3264
presumptive neural plate1.78e-3264
brain2.14e-3247
future brain2.14e-3247
gray matter3.79e-3234
regional part of brain6.94e-3146
ecto-epithelium1.93e-2873
ectoderm-derived structure2.10e-2895
ectoderm2.10e-2895
presumptive ectoderm2.10e-2895
anterior neural tube1.75e-2740
regional part of forebrain3.88e-2639
forebrain3.88e-2639
future forebrain3.88e-2639
brain grey matter1.21e-2529
regional part of telencephalon1.21e-2529
telencephalon1.21e-2529
pre-chordal neural plate7.92e-2449
structure with developmental contribution from neural crest6.44e-2092
cerebral cortex5.49e-1721
cerebral hemisphere5.49e-1721
pallium5.49e-1721
occipital lobe4.09e-1510
visual cortex4.09e-1510
neocortex4.09e-1510
regional part of cerebral cortex6.34e-1317
tube1.05e-12114
anatomical conduit6.67e-12122
posterior neural tube3.09e-1112
chordal neural plate3.09e-1112
basal ganglion7.54e-108
nuclear complex of neuraxis7.54e-108
aggregate regional part of brain7.54e-108
collection of basal ganglia7.54e-108
cerebral subcortex7.54e-108
spinal cord7.19e-096
dorsal region element7.19e-096
dorsum7.19e-096
regional part of spinal cord1.08e-075
gray matter of spinal cord1.08e-075
corpus striatum6.40e-075
striatum6.40e-075
ventral part of telencephalon6.40e-075
future corpus striatum6.40e-075
organ system subdivision8.08e-07194
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